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Properties
| Property Name | Value |
|---|
| TranscriptId | 186163 |
| Track | FilteredModels2 |
| ProteinId | 186077 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_23 | supercontig | scaffold_23:32405..34460 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8201 ID=mRNA_8201|Name=jgi.p|Nanoce1779_2|186077|organism=Nannochloropsis oceanica|type=mRNA|length=1161bp
CCCTCATCTCGGCTATGCAGAACCTCTACAACCCTCGGCGCCTTAGACGA
GGAAGGGCTTCTGACCCGCTTAGGACGGAAGATGGCAGAATTCCCCCTCG
AGCCCCAGCTTTCCAAAATCCTCATAACGAGCGTAGAGCTTGCCTGTACA
GACGAGATTCTGACCATCGTGGCCATGTTGTCTGTGGAAACTCCCTTCTA
TCGCCCGAAAGACAAGCAAGCTCAAGCAGACATGAAAAAGGCCAAGTTTT
TCCAGGTGGAAGGCGACCATCTCACCCTCCTCGCCGTATACGAGGGCTGG
AAAAACGCCAAATTCTCCAACCCGTGGTGCTTCGAGAACTTTCTACAGGC
CCGGGCGATGAAGAGAGCACAAGATGTGCGGAAGCAGCTGGTGGCCATCT
TGGATAGATATAAGATGGATATACTCTCGGCAGGCCGGAACTTCAAGAAG
ATTCAACAGGCCATATGCTCCGGGTATTTTACCAACGTGGCGAAGAAGGA
TCCTCAGGAGGGCTTCAAGACGATCGTGGACAACAATCTTGTCTATATCC
ATCCCTCCTCCGCGCTCTTCAACAAGAGTCCCGAGTGGGTGCTCTATCAC
GAGCTCGTGATGACCACCAAGGAATACATGCGTAACGTCATGGCTGTTGA
TCCCAAGTGGCTCGTGGAACTCGCGCCAAAATTCTTCAAGGCGGCAGACC
CGCACAAGCTCACCAAGGCCAAGCGGATGCAGAAAATCGAGCCGTTGTAC
GATCGCTTCAACCCGCCCAACTCCTGGCGCTTGTCCAAGAGGAAGGGATA
GAGGGAGGGAGACGGAGGGAGGGGGGAAGGGACGGAGACGGAGGGAGGAA
TAGAAGGAGGGAGGCGGGGAGGAAAGACGGGCGTGTACGGGCTCGTCAGG
GGGGGTCAGACCGCAGGAAGAAAGGAAGGCGGCAAGATAAGAACAAGCAG
CCAAATCGTCAGCACCAGCACCAACAGCATCGATAAGCGAAAGAATAAAA
AAAGGTAACCAATTACCACGAGCATATATATATATATGATTCCCTGTTTT
TCCCCCTCAGATGGAACGAGTTCCTCTTCCCTACTTTCCACGGAGACGGC
CTGAGGAAGGGGATAAAGTTGTAAGCCATGCCCTTGCGTAACGTCGGTTT
TAATAAACCGT back to topprotein sequence of jgi.p|Nanoce1779_2|186077 >mRNA_8201-protein ID=mRNA_8201-protein|Name=jgi.p|Nanoce1779_2|186077|organism=Nannochloropsis oceanica|type=polypeptide|length=240bp
MAEFPLEPQLSKILITSVELACTDEILTIVAMLSVETPFYRPKDKQAQAD
MKKAKFFQVEGDHLTLLAVYEGWKNAKFSNPWCFENFLQARAMKRAQDVR
KQLVAILDRYKMDILSAGRNFKKIQQAICSGYFTNVAKKDPQEGFKTIVD
NNLVYIHPSSALFNKSPEWVLYHELVMTTKEYMRNVMAVDPKWLVELAPK
FFKAADPHKLTKAKRMQKIEPLYDRFNPPNSWRLSKRKG* back to topmRNA from alignment at scaffold_23:32405..34460- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8201 ID=mRNA_8201|Name=jgi.p|Nanoce1779_2|186077|organism=Nannochloropsis oceanica|type=mRNA|length=2056bp|location=Sequence derived from alignment at scaffold_23:32405..34460- (Nannochloropsis oceanica)
CCCTCATCTCGGCTATGCAGGTACTTCCTTCCTCCCTCCCTCCCTCCCTT
CCATGACATCTGCTCCCTCGGCGCCTTGGACGAAAAAGGCATTCTCACAC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTTCCAGAACCTCTACAACCCTCGGCGCCTTAGACGAGGAAGGGCTT
CTGACCCGCTTAGGACGGAAGATGGCAGAATTCCCCCTCGAGCCCCAGCT
TTCCAAAATCCTCATAACGAGCGTAGAGCTTGCCTGTACAGGTAAGAAGG
CCCTCCCTCCCTCCCTCCCTCCCACCCTCTCTCCCTCTCCCCCTCCCTCC
CTTCCTCTGTTCCATTCACGTTCCTCCCTCCCTCCCTCTCTCCCTCCCTC
CTCATCAGACGAGATTCTGACCATCGTGGCCATGTTGTCTGTGGAAACTC
CCTTCTATCGCCCGAAAGACAAGCAAGCTCAAGCAGACATGAAAAAGGCC
AAGTTTTTCCAGGTACGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CTTCTCCAGCCTTGTGACGTGCTCCTTTCTTTTCCTTGTTTCACTTCCTT
CCCTTTCCCCTCGCCCCCTCCTCAGGTGGAAGGCGACCATCTCACCCTCC
TCGCCGTATACGAGGGCTGGAAAAACGCCAAATTCTCCAACCCGTGGTGC
TTCGAGAACTTTCTACAGGCCCGGGCGATGAAGAGAGCACAAGATGTGCG
GAAGCAGCTGGTGGCCATCTTGGATAGATATAAGATGGATATACTCTCGG
CAGGTACGTACACTATCCCTCCCTTTCTCCCTCCCTCCCTCCCTCCCTCC
CTTCCCCTCCCCTCCGTCCTCGCCACTTTCATCGTCATCCCTCCTTCCGC
CCCTCGTCTCCTCCTGTTCCATCACTCCATCACCCACCTACCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCCCGGCAGGCCGGAACTTCAAGAAGATTCA
ACAGGCCATATGCTCCGGGTATTTTACCAACGTGGCGAAGAAGGATCCTC
AGGAGGGCTTCAAGACGATCGTGGACAACAATCTTGTCTATATCCATCCC
TCCTCCGCGCTCTTCAACAAGAGTCCCGAGTGGGTGCTCTATCACGAGCT
CGTGATGACCACCAAGTACGTATCTGCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCCTCCTTCCTTCCTCCCTCTCTGGATAGCTCAACGTATCT
CCATCATGGACCATCCCACCTCACTAGAACTCACCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCTCTCTCCCTCAATCACAGGGAATACA
TGCGTAACGTCATGGCTGTTGATCCCAAGTGGCTCGTGGAACTCGCGCCA
AAATTCTTCAAGGCGGCAGACCCGCACAAGCTCACCAAGGTAAGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAAGGGCGATTCTTGACAT
TCATGTGCATGAGCCGTAATTTCTTTCCTCCGTCATTCCTCCTTGCTATC
TTTCTGCTTGCCCTCATTCCCACCCTCCTTCCCTCCGTCCCTCCTGCTCC
CTCCTTCCACAGGCCAAGCGGATGCAGAAAATCGAGCCGTTGTACGATCG
CTTCAACCCGCCCAACTCCTGGCGCTTGTCCAAGAGGAAGGGATAGAGGG
AGGGAGACGGAGGGAGGGGGGAAGGGACGGAGACGGAGGGAGGAATAGAA
GGAGGGAGGCGGGGAGGAAAGACGGGCGTGTACGGGCTCGTCAGGGGGGG
TCAGACCGCAGGAAGAAAGGAAGGCGGCAAGATAAGAACAAGCAGCCAAA
TCGTCAGCACCAGCACCAACAGCATCGATAAGCGAAAGAATAAAAAAAGG
TAACCAATTACCACGAGCATATATATATATATGATTCCCTGTTTTTCCCC
CTCAGATGGAACGAGTTCCTCTTCCCTACTTTCCACGGAGACGGCCTGAG
GAAGGGGATAAAGTTGTAAGCCATGCCCTTGCGTAACGTCGGTTTTAATA
AACCGT back to topCoding sequence (CDS) from alignment at scaffold_23:32405..34460- >mRNA_8201 ID=mRNA_8201|Name=jgi.p|Nanoce1779_2|186077|organism=Nannochloropsis oceanica|type=CDS|length=4320bp|location=Sequence derived from alignment at scaffold_23:32405..34460- (Nannochloropsis oceanica)
GCCAAGCGGATGCAGAAAATCGAGCCGTTGTACGATCGCTTCAACCCGCC
CAACTCCTGGCGCTTGTCCAAGAGGAAGGGATAGGGAATACATGCGTAAC
GTCATGGCTGTTGATCCCAAGTGGCTCGTGGAACTCGCGCCAAAATTCTT
CAAGGCGGCAGACCCGCACAAGCTCACCAAGGCCGGAACTTCAAGAAGAT
TCAACAGGCCATATGCTCCGGGTATTTTACCAACGTGGCGAAGAAGGATC
CTCAGGAGGGCTTCAAGACGATCGTGGACAACAATCTTGTCTATATCCAT
CCCTCCTCCGCGCTCTTCAACAAGAGTCCCGAGTGGGTGCTCTATCACGA
GCTCGTGATGACCACCAAGTGGAAGGCGACCATCTCACCCTCCTCGCCGT
ATACGAGGGCTGGAAAAACGCCAAATTCTCCAACCCGTGGTGCTTCGAGA
ACTTTCTACAGGCCCGGGCGATGAAGAGAGCACAAGATGTGCGGAAGCAG
CTGGTGGCCATCTTGGATAGATATAAGATGGATATACTCTCGGCAGACGA
GATTCTGACCATCGTGGCCATGTTGTCTGTGGAAACTCCCTTCTATCGCC
CGAAAGACAAGCAAGCTCAAGCAGACATGAAAAAGGCCAAGTTTTTCCAG
ATGGCAGAATTCCCCCTCGAGCCCCAGCTTTCCAAAATCCTCATAACGAG
CGTAGAGCTTGCCTGTACAGGCCAAGCGGATGCAGAAAATCGAGCCGTTG
TACGATCGCTTCAACCCGCCCAACTCCTGGCGCTTGTCCAAGAGGAAGGG
ATAGGGAATACATGCGTAACGTCATGGCTGTTGATCCCAAGTGGCTCGTG
GAACTCGCGCCAAAATTCTTCAAGGCGGCAGACCCGCACAAGCTCACCAA
GGCCGGAACTTCAAGAAGATTCAACAGGCCATATGCTCCGGGTATTTTAC
CAACGTGGCGAAGAAGGATCCTCAGGAGGGCTTCAAGACGATCGTGGACA
ACAATCTTGTCTATATCCATCCCTCCTCCGCGCTCTTCAACAAGAGTCCC
GAGTGGGTGCTCTATCACGAGCTCGTGATGACCACCAAGTGGAAGGCGAC
CATCTCACCCTCCTCGCCGTATACGAGGGCTGGAAAAACGCCAAATTCTC
CAACCCGTGGTGCTTCGAGAACTTTCTACAGGCCCGGGCGATGAAGAGAG
CACAAGATGTGCGGAAGCAGCTGGTGGCCATCTTGGATAGATATAAGATG
GATATACTCTCGGCAGACGAGATTCTGACCATCGTGGCCATGTTGTCTGT
GGAAACTCCCTTCTATCGCCCGAAAGACAAGCAAGCTCAAGCAGACATGA
AAAAGGCCAAGTTTTTCCAGATGGCAGAATTCCCCCTCGAGCCCCAGCTT
TCCAAAATCCTCATAACGAGCGTAGAGCTTGCCTGTACAGGCCAAGCGGA
TGCAGAAAATCGAGCCGTTGTACGATCGCTTCAACCCGCCCAACTCCTGG
CGCTTGTCCAAGAGGAAGGGATAGGGAATACATGCGTAACGTCATGGCTG
TTGATCCCAAGTGGCTCGTGGAACTCGCGCCAAAATTCTTCAAGGCGGCA
GACCCGCACAAGCTCACCAAGGCCGGAACTTCAAGAAGATTCAACAGGCC
ATATGCTCCGGGTATTTTACCAACGTGGCGAAGAAGGATCCTCAGGAGGG
CTTCAAGACGATCGTGGACAACAATCTTGTCTATATCCATCCCTCCTCCG
CGCTCTTCAACAAGAGTCCCGAGTGGGTGCTCTATCACGAGCTCGTGATG
ACCACCAAGTGGAAGGCGACCATCTCACCCTCCTCGCCGTATACGAGGGC
TGGAAAAACGCCAAATTCTCCAACCCGTGGTGCTTCGAGAACTTTCTACA
GGCCCGGGCGATGAAGAGAGCACAAGATGTGCGGAAGCAGCTGGTGGCCA
TCTTGGATAGATATAAGATGGATATACTCTCGGCAGACGAGATTCTGACC
ATCGTGGCCATGTTGTCTGTGGAAACTCCCTTCTATCGCCCGAAAGACAA
GCAAGCTCAAGCAGACATGAAAAAGGCCAAGTTTTTCCAGATGGCAGAAT
TCCCCCTCGAGCCCCAGCTTTCCAAAATCCTCATAACGAGCGTAGAGCTT
GCCTGTACAGGCCAAGCGGATGCAGAAAATCGAGCCGTTGTACGATCGCT
TCAACCCGCCCAACTCCTGGCGCTTGTCCAAGAGGAAGGGATAGGGAATA
CATGCGTAACGTCATGGCTGTTGATCCCAAGTGGCTCGTGGAACTCGCGC
CAAAATTCTTCAAGGCGGCAGACCCGCACAAGCTCACCAAGGCCGGAACT
TCAAGAAGATTCAACAGGCCATATGCTCCGGGTATTTTACCAACGTGGCG
AAGAAGGATCCTCAGGAGGGCTTCAAGACGATCGTGGACAACAATCTTGT
CTATATCCATCCCTCCTCCGCGCTCTTCAACAAGAGTCCCGAGTGGGTGC
TCTATCACGAGCTCGTGATGACCACCAAGTGGAAGGCGACCATCTCACCC
TCCTCGCCGTATACGAGGGCTGGAAAAACGCCAAATTCTCCAACCCGTGG
TGCTTCGAGAACTTTCTACAGGCCCGGGCGATGAAGAGAGCACAAGATGT
GCGGAAGCAGCTGGTGGCCATCTTGGATAGATATAAGATGGATATACTCT
CGGCAGACGAGATTCTGACCATCGTGGCCATGTTGTCTGTGGAAACTCCC
TTCTATCGCCCGAAAGACAAGCAAGCTCAAGCAGACATGAAAAAGGCCAA
GTTTTTCCAGATGGCAGAATTCCCCCTCGAGCCCCAGCTTTCCAAAATCC
TCATAACGAGCGTAGAGCTTGCCTGTACAGGCCAAGCGGATGCAGAAAAT
CGAGCCGTTGTACGATCGCTTCAACCCGCCCAACTCCTGGCGCTTGTCCA
AGAGGAAGGGATAGGGAATACATGCGTAACGTCATGGCTGTTGATCCCAA
GTGGCTCGTGGAACTCGCGCCAAAATTCTTCAAGGCGGCAGACCCGCACA
AGCTCACCAAGGCCGGAACTTCAAGAAGATTCAACAGGCCATATGCTCCG
GGTATTTTACCAACGTGGCGAAGAAGGATCCTCAGGAGGGCTTCAAGACG
ATCGTGGACAACAATCTTGTCTATATCCATCCCTCCTCCGCGCTCTTCAA
CAAGAGTCCCGAGTGGGTGCTCTATCACGAGCTCGTGATGACCACCAAGT
GGAAGGCGACCATCTCACCCTCCTCGCCGTATACGAGGGCTGGAAAAACG
CCAAATTCTCCAACCCGTGGTGCTTCGAGAACTTTCTACAGGCCCGGGCG
ATGAAGAGAGCACAAGATGTGCGGAAGCAGCTGGTGGCCATCTTGGATAG
ATATAAGATGGATATACTCTCGGCAGACGAGATTCTGACCATCGTGGCCA
TGTTGTCTGTGGAAACTCCCTTCTATCGCCCGAAAGACAAGCAAGCTCAA
GCAGACATGAAAAAGGCCAAGTTTTTCCAGATGGCAGAATTCCCCCTCGA
GCCCCAGCTTTCCAAAATCCTCATAACGAGCGTAGAGCTTGCCTGTACAG
GCCAAGCGGATGCAGAAAATCGAGCCGTTGTACGATCGCTTCAACCCGCC
CAACTCCTGGCGCTTGTCCAAGAGGAAGGGATAGGGAATACATGCGTAAC
GTCATGGCTGTTGATCCCAAGTGGCTCGTGGAACTCGCGCCAAAATTCTT
CAAGGCGGCAGACCCGCACAAGCTCACCAAGGCCGGAACTTCAAGAAGAT
TCAACAGGCCATATGCTCCGGGTATTTTACCAACGTGGCGAAGAAGGATC
CTCAGGAGGGCTTCAAGACGATCGTGGACAACAATCTTGTCTATATCCAT
CCCTCCTCCGCGCTCTTCAACAAGAGTCCCGAGTGGGTGCTCTATCACGA
GCTCGTGATGACCACCAAGTGGAAGGCGACCATCTCACCCTCCTCGCCGT
ATACGAGGGCTGGAAAAACGCCAAATTCTCCAACCCGTGGTGCTTCGAGA
ACTTTCTACAGGCCCGGGCGATGAAGAGAGCACAAGATGTGCGGAAGCAG
CTGGTGGCCATCTTGGATAGATATAAGATGGATATACTCTCGGCAGACGA
GATTCTGACCATCGTGGCCATGTTGTCTGTGGAAACTCCCTTCTATCGCC
CGAAAGACAAGCAAGCTCAAGCAGACATGAAAAAGGCCAAGTTTTTCCAG
ATGGCAGAATTCCCCCTCGAGCCCCAGCTTTCCAAAATCCTCATAACGAG
CGTAGAGCTTGCCTGTACAG back to top
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