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Properties
Property Name | Value |
TranscriptId | 186101 |
Track | FilteredModels2 |
ProteinId | 186015 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_23 | supercontig | scaffold_23:30155..32415 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8200 ID=mRNA_8200|Name=jgi.p|Nanoce1779_2|186015|organism=Nannochloropsis oceanica|type=mRNA|length=1374bp GGGAGGGACGGAGGGAAGGGGATCGAGAGGAGTCCATGGAATAGCATGAA ACCGAAATGGCCCCATTCCTCACCCTTCCCTCCCTCCTTCCCTCCCTCCG ATTCCTTTCCTCCCTCGCTTCCCCTCCTTCCTCATCAGAACGACAATCTC ATTTTATTTGGAGGCCACGACGGCACCAACCACTTGAATGATGTCTCCCT CTTTCACTTCCCCTCCTCCACCTGGACCGTGCTGGAGATCTCTCCCGGCG CCCTCTACCCTCCCCCCCTTCCCCGCGATTCCCAGTCGGCCGTTATCCAC CACGAGAGCATGTACGTCTTCGGCGGGTCCACAGGCAGTGCCATGGATGA CCTCCACGAGCTTAACCTTGAGGAAAGGCGATGGCGGCCAATCATCCCTC CGTCCGGAAGTCTCCGCCCCGGCCAACGATTCTGCCACGTGGCGTGCGTG TGGAAGCACCAGATGCTGGTTTTTGGGGGCTACGACGGCTCTCAACGCCT GAATGACTTTTGGGCCTTCAAGTTCGGTCCTGCCCTTCTGGCCTGCCAAA TTCCCGAGCCCTCCCTCCTTCCCGACCTCCGCGGCTTCGTCAACAGCCAA GCACTCTCGGACGTTACCTTCATCGTGGAGGGCCAGCGGGTTTATGCTCA CAAAATCCTCTGTGTCCGCTCTCCCTACTTCCGGGCATTGTTCACCGGCG GGATGAGGGAGGCCAGAGAGGGGGAAGTGGTGCTGCCAGACGTTCGCTAC CCCATTTTTCTCTCCCTCCTCGAGTACCTCTACACGGACTCCCTGACCAT CGACCTGCCAACGTCCTTCCAGCTGTTTGAAGCTGCCGACCGTTTCGGAG TGGAACGGCTCAAAAAAATGTGCGAGCACAAGATGCTCACGTCCCTCTCG CTGGACAACGCGGCTATGATTCTATACACCGCCGATGTCTACCACGCCGC GGGCTTGCGGCAAAAGTGCTTGGGATTCATCCTCCAGAACTTCGACGCCG TGAGTAAGACGGAGGGTTTTGTGGAGATGGGCCATCGGAACGTGGATTTG GTCTTTGAGATCTTGAAGAAGCGGTAGGGCGAGGGGGGGAGGAGGGGAGG GAAAGAGGGAAGGAAGGAAGGAAGGAAGGAGGAAGGGGAAGGATTGTAGG GAGGGGAAGGATGGAAGAGAGGGGTAGCCAGGAGAGAGGTATGTACATGC GATTCATGTGGAAAGCGACCCGGAAAAAGACGTAGAGAAAAGGCGGAAGA AGAGCGAGTCATCATGGAAGAAGAGCTAATCATGTCGTCCCCGGAGAAAC GGGTGGCGGGTTAAGAAGGAAGTTGCAACAAGCGAAGAAGCGAAGAAACA TCATCATTCTGCAACGGTTTATTA back to topprotein sequence of jgi.p|Nanoce1779_2|186015 >mRNA_8200-protein ID=mRNA_8200-protein|Name=jgi.p|Nanoce1779_2|186015|organism=Nannochloropsis oceanica|type=polypeptide|length=344bp MKPKWPHSSPFPPSFPPSDSFPPSLPLLPHQNDNLILFGGHDGTNHLNDV SLFHFPSSTWTVLEISPGALYPPPLPRDSQSAVIHHESMYVFGGSTGSAM DDLHELNLEERRWRPIIPPSGSLRPGQRFCHVACVWKHQMLVFGGYDGSQ RLNDFWAFKFGPALLACQIPEPSLLPDLRGFVNSQALSDVTFIVEGQRVY AHKILCVRSPYFRALFTGGMREAREGEVVLPDVRYPIFLSLLEYLYTDSL TIDLPTSFQLFEAADRFGVERLKKMCEHKMLTSLSLDNAAMILYTADVYH AAGLRQKCLGFILQNFDAVSKTEGFVEMGHRNVDLVFEILKKR* back to topmRNA from alignment at scaffold_23:30155..32415+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8200 ID=mRNA_8200|Name=jgi.p|Nanoce1779_2|186015|organism=Nannochloropsis oceanica|type=mRNA|length=2261bp|location=Sequence derived from alignment at scaffold_23:30155..32415+ (Nannochloropsis oceanica) GGGAGGGACGGAGGGAAGGGGATCGAGAGGAGTCCATGGAATAGCATGAA
ACCGAAATGGCCCCATTCCTCACCCTTCCCTCCCTCCTTCCCTCCCTCCG
ATTCCTTTCCTCCCTCGCTTCCCCTCCTTCCTCATCAGAACGACAATCTC
ATTTTATTTGGAGGCCACGACGGCACCAACCACTTGAATGATGTCTCCCT
CTTTCACTTCCCCTCCTCCACCTGGACCGTGCTGGAGATCTCTCCCGGCG
CCCTCTACCCTCCCCCCCTTCCCCGCGATTCCCAGTCGGCCGTTATCCAC
CACGAGAGTAAGATGATGATAAGGAGGGAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGCGATATCTTCTTCACTGGGGGAGT
GCCTTGGATGCCCTCCGCGAGCTCTATCGGGGAGTAAATCACCACGCGAC
CACCGACTCCTTCCTCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTAGGCATGTACGTCTTCGGCGG
GTCCACAGGCAGTGCCATGGATGACCTCCACGAGCTTAACCTTGAGGAAA
GGCGATGGCGGCCAATCATCCCTCCGTCCGGAAGTCTCCGCCCCGGCCAA
CGATTCTGCCACGTGGCGTGCGTGTGGAAGCACCAGATGCTGGTTTTTGG
GGGCTACGACGGCTCTCAACGGTAAGGCGAAGAGGGAAGGAGGGAGGGAG
GGAGGGAGAAAGAGGTTGAGGTCACCAGCGTAGCCCTTGCTCTTGATGTC
TCATCCTGCTCCCCTCTCCCTCCCTCCCTCCCTCCTTCCCTCCTTCCCTC
CTTACCTCCCCCCTTCCCTCCCTCCATAGCCTGAATGACTTTTGGGCCTT
CAAGTTCGGTCCTGCCCTTCTGGCCTGCCAAATTCCCGAGCCCTCCCTCC
TTCCCGACCTCCGCGGCTTCGTCAACAGCCAAGCACTCTCGGACGTTACC
TTCATCGTGGAGGGCCAGCGGGTTTATGCTCACAAAATCCTCTGTGTCCG
CTCTCCCTACTTCCGGGCATTGTGAGCCTTTGCGCCCAACCAACCCTCCC
TCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCTCTGCATT
TCAATCTAGCGGGCCCACGCCTACCTGTCCTTTGACTCTCCCTCCCTCCC
TCCCTCCTCCAGGTTCACCGGCGGGATGAGGGAGGCCAGAGAGGGGGAAG
TGGTGCTGCCAGACGTTCGCTACCCCATTTTTCTCTCCCTCCTCGAGTAC
CTCTACACGGACTGTAAGGACCGAGAGGGAGGAGGGAGGGAAGGGAAGGA
AGATAGTGGCCGTTTGCCACGGACATCACCGATGGATGAACCTTCCCTCC
CTCCCTCTCTCCCTCCCTACCTCCCTTGCAGCCCTGACCATCGACCTGCC
AACGTCCTTCCAGCTGTTTGAAGCTGCCGACCGTTTCGGAGTGGAACGGC
TCAAAAAAATGTGCGAGCACAAGATGCTCACGTCCCTCTCGCTGGACAAC
GCGGCTATGATTCTATACACCGCCGATGTCTACCACGCCGCGGGCTTGCG
GCAAAAGTGCTTGGGATTCATCCTCCAGGTACCTCTTCGCCCCCTCCCTC
CCTCCCTCCCTCTCTCTGATCTCCATCAATTTGGTGACTTTCCATTTTTT
TTACATGAAAGAATGTAGACGTGCCTGGATGCGAAGGGTTGGATTCGTCT
CTGGTATGAAAAATCTAAGCCATGTGTATATGCGTGTATGGAGCCTCCTC
GACTTCATCCTCCTTCTCACGCGTGTCCCTCACCCTCCCTCCCTCCCTCT
CTCCCTCACTCCCTCCCTTCCCAGAACTTCGACGCCGTGAGTAAGACGGA
GGGTTTTGTGGAGATGGGCCATCGGAACGTGGATTTGGTCTTTGAGATCT
TGAAGAAGCGGTAGGGCGAGGGGGGGAGGAGGGGAGGGAAAGAGGGAAGG
AAGGAAGGAAGGAAGGAGGAAGGGGAAGGATTGTAGGGAGGGGAAGGATG
GAAGAGAGGGGTAGCCAGGAGAGAGGTATGTACATGCGATTCATGTGGAA
AGCGACCCGGAAAAAGACGTAGAGAAAAGGCGGAAGAAGAGCGAGTCATC
ATGGAAGAAGAGCTAATCATGTCGTCCCCGGAGAAACGGGTGGCGGGTTA
AGAAGGAAGTTGCAACAAGCGAAGAAGCGAAGAAACATCATCATTCTGCA
ACGGTTTATTA back to topCoding sequence (CDS) from alignment at scaffold_23:30155..32415+ >mRNA_8200 ID=mRNA_8200|Name=jgi.p|Nanoce1779_2|186015|organism=Nannochloropsis oceanica|type=CDS|length=6192bp|location=Sequence derived from alignment at scaffold_23:30155..32415+ (Nannochloropsis oceanica) ATGAAACCGAAATGGCCCCATTCCTCACCCTTCCCTCCCTCCTTCCCTCC CTCCGATTCCTTTCCTCCCTCGCTTCCCCTCCTTCCTCATCAGAACGACA ATCTCATTTTATTTGGAGGCCACGACGGCACCAACCACTTGAATGATGTC TCCCTCTTTCACTTCCCCTCCTCCACCTGGACCGTGCTGGAGATCTCTCC CGGCGCCCTCTACCCTCCCCCCCTTCCCCGCGATTCCCAGTCGGCCGTTA TCCACCACGAGAGCATGTACGTCTTCGGCGGGTCCACAGGCAGTGCCATG GATGACCTCCACGAGCTTAACCTTGAGGAAAGGCGATGGCGGCCAATCAT CCCTCCGTCCGGAAGTCTCCGCCCCGGCCAACGATTCTGCCACGTGGCGT GCGTGTGGAAGCACCAGATGCTGGTTTTTGGGGGCTACGACGGCTCTCAA CGCCTGAATGACTTTTGGGCCTTCAAGTTCGGTCCTGCCCTTCTGGCCTG CCAAATTCCCGAGCCCTCCCTCCTTCCCGACCTCCGCGGCTTCGTCAACA GCCAAGCACTCTCGGACGTTACCTTCATCGTGGAGGGCCAGCGGGTTTAT GCTCACAAAATCCTCTGTGTCCGCTCTCCCTACTTCCGGGCATTGTTCAC CGGCGGGATGAGGGAGGCCAGAGAGGGGGAAGTGGTGCTGCCAGACGTTC GCTACCCCATTTTTCTCTCCCTCCTCGAGTACCTCTACACGGACTCCCTG ACCATCGACCTGCCAACGTCCTTCCAGCTGTTTGAAGCTGCCGACCGTTT CGGAGTGGAACGGCTCAAAAAAATGTGCGAGCACAAGATGCTCACGTCCC TCTCGCTGGACAACGCGGCTATGATTCTATACACCGCCGATGTCTACCAC GCCGCGGGCTTGCGGCAAAAGTGCTTGGGATTCATCCTCCAGAACTTCGA CGCCGTGAGTAAGACGGAGGGTTTTGTGGAGATGGGCCATCGGAACGTGG ATTTGGTCTTTGAGATCTTGAAGAAGCGGTAGATGAAACCGAAATGGCCC CATTCCTCACCCTTCCCTCCCTCCTTCCCTCCCTCCGATTCCTTTCCTCC CTCGCTTCCCCTCCTTCCTCATCAGAACGACAATCTCATTTTATTTGGAG GCCACGACGGCACCAACCACTTGAATGATGTCTCCCTCTTTCACTTCCCC TCCTCCACCTGGACCGTGCTGGAGATCTCTCCCGGCGCCCTCTACCCTCC CCCCCTTCCCCGCGATTCCCAGTCGGCCGTTATCCACCACGAGAGCATGT ACGTCTTCGGCGGGTCCACAGGCAGTGCCATGGATGACCTCCACGAGCTT AACCTTGAGGAAAGGCGATGGCGGCCAATCATCCCTCCGTCCGGAAGTCT CCGCCCCGGCCAACGATTCTGCCACGTGGCGTGCGTGTGGAAGCACCAGA TGCTGGTTTTTGGGGGCTACGACGGCTCTCAACGCCTGAATGACTTTTGG GCCTTCAAGTTCGGTCCTGCCCTTCTGGCCTGCCAAATTCCCGAGCCCTC CCTCCTTCCCGACCTCCGCGGCTTCGTCAACAGCCAAGCACTCTCGGACG TTACCTTCATCGTGGAGGGCCAGCGGGTTTATGCTCACAAAATCCTCTGT GTCCGCTCTCCCTACTTCCGGGCATTGTTCACCGGCGGGATGAGGGAGGC CAGAGAGGGGGAAGTGGTGCTGCCAGACGTTCGCTACCCCATTTTTCTCT CCCTCCTCGAGTACCTCTACACGGACTCCCTGACCATCGACCTGCCAACG TCCTTCCAGCTGTTTGAAGCTGCCGACCGTTTCGGAGTGGAACGGCTCAA AAAAATGTGCGAGCACAAGATGCTCACGTCCCTCTCGCTGGACAACGCGG CTATGATTCTATACACCGCCGATGTCTACCACGCCGCGGGCTTGCGGCAA AAGTGCTTGGGATTCATCCTCCAGAACTTCGACGCCGTGAGTAAGACGGA GGGTTTTGTGGAGATGGGCCATCGGAACGTGGATTTGGTCTTTGAGATCT TGAAGAAGCGGTAGATGAAACCGAAATGGCCCCATTCCTCACCCTTCCCT CCCTCCTTCCCTCCCTCCGATTCCTTTCCTCCCTCGCTTCCCCTCCTTCC TCATCAGAACGACAATCTCATTTTATTTGGAGGCCACGACGGCACCAACC ACTTGAATGATGTCTCCCTCTTTCACTTCCCCTCCTCCACCTGGACCGTG CTGGAGATCTCTCCCGGCGCCCTCTACCCTCCCCCCCTTCCCCGCGATTC CCAGTCGGCCGTTATCCACCACGAGAGCATGTACGTCTTCGGCGGGTCCA CAGGCAGTGCCATGGATGACCTCCACGAGCTTAACCTTGAGGAAAGGCGA TGGCGGCCAATCATCCCTCCGTCCGGAAGTCTCCGCCCCGGCCAACGATT CTGCCACGTGGCGTGCGTGTGGAAGCACCAGATGCTGGTTTTTGGGGGCT ACGACGGCTCTCAACGCCTGAATGACTTTTGGGCCTTCAAGTTCGGTCCT GCCCTTCTGGCCTGCCAAATTCCCGAGCCCTCCCTCCTTCCCGACCTCCG CGGCTTCGTCAACAGCCAAGCACTCTCGGACGTTACCTTCATCGTGGAGG GCCAGCGGGTTTATGCTCACAAAATCCTCTGTGTCCGCTCTCCCTACTTC CGGGCATTGTTCACCGGCGGGATGAGGGAGGCCAGAGAGGGGGAAGTGGT GCTGCCAGACGTTCGCTACCCCATTTTTCTCTCCCTCCTCGAGTACCTCT ACACGGACTCCCTGACCATCGACCTGCCAACGTCCTTCCAGCTGTTTGAA GCTGCCGACCGTTTCGGAGTGGAACGGCTCAAAAAAATGTGCGAGCACAA GATGCTCACGTCCCTCTCGCTGGACAACGCGGCTATGATTCTATACACCG CCGATGTCTACCACGCCGCGGGCTTGCGGCAAAAGTGCTTGGGATTCATC CTCCAGAACTTCGACGCCGTGAGTAAGACGGAGGGTTTTGTGGAGATGGG CCATCGGAACGTGGATTTGGTCTTTGAGATCTTGAAGAAGCGGTAGATGA AACCGAAATGGCCCCATTCCTCACCCTTCCCTCCCTCCTTCCCTCCCTCC GATTCCTTTCCTCCCTCGCTTCCCCTCCTTCCTCATCAGAACGACAATCT CATTTTATTTGGAGGCCACGACGGCACCAACCACTTGAATGATGTCTCCC TCTTTCACTTCCCCTCCTCCACCTGGACCGTGCTGGAGATCTCTCCCGGC GCCCTCTACCCTCCCCCCCTTCCCCGCGATTCCCAGTCGGCCGTTATCCA CCACGAGAGCATGTACGTCTTCGGCGGGTCCACAGGCAGTGCCATGGATG ACCTCCACGAGCTTAACCTTGAGGAAAGGCGATGGCGGCCAATCATCCCT CCGTCCGGAAGTCTCCGCCCCGGCCAACGATTCTGCCACGTGGCGTGCGT GTGGAAGCACCAGATGCTGGTTTTTGGGGGCTACGACGGCTCTCAACGCC TGAATGACTTTTGGGCCTTCAAGTTCGGTCCTGCCCTTCTGGCCTGCCAA ATTCCCGAGCCCTCCCTCCTTCCCGACCTCCGCGGCTTCGTCAACAGCCA AGCACTCTCGGACGTTACCTTCATCGTGGAGGGCCAGCGGGTTTATGCTC ACAAAATCCTCTGTGTCCGCTCTCCCTACTTCCGGGCATTGTTCACCGGC GGGATGAGGGAGGCCAGAGAGGGGGAAGTGGTGCTGCCAGACGTTCGCTA CCCCATTTTTCTCTCCCTCCTCGAGTACCTCTACACGGACTCCCTGACCA TCGACCTGCCAACGTCCTTCCAGCTGTTTGAAGCTGCCGACCGTTTCGGA GTGGAACGGCTCAAAAAAATGTGCGAGCACAAGATGCTCACGTCCCTCTC GCTGGACAACGCGGCTATGATTCTATACACCGCCGATGTCTACCACGCCG CGGGCTTGCGGCAAAAGTGCTTGGGATTCATCCTCCAGAACTTCGACGCC GTGAGTAAGACGGAGGGTTTTGTGGAGATGGGCCATCGGAACGTGGATTT GGTCTTTGAGATCTTGAAGAAGCGGTAGATGAAACCGAAATGGCCCCATT CCTCACCCTTCCCTCCCTCCTTCCCTCCCTCCGATTCCTTTCCTCCCTCG CTTCCCCTCCTTCCTCATCAGAACGACAATCTCATTTTATTTGGAGGCCA CGACGGCACCAACCACTTGAATGATGTCTCCCTCTTTCACTTCCCCTCCT CCACCTGGACCGTGCTGGAGATCTCTCCCGGCGCCCTCTACCCTCCCCCC CTTCCCCGCGATTCCCAGTCGGCCGTTATCCACCACGAGAGCATGTACGT CTTCGGCGGGTCCACAGGCAGTGCCATGGATGACCTCCACGAGCTTAACC TTGAGGAAAGGCGATGGCGGCCAATCATCCCTCCGTCCGGAAGTCTCCGC CCCGGCCAACGATTCTGCCACGTGGCGTGCGTGTGGAAGCACCAGATGCT GGTTTTTGGGGGCTACGACGGCTCTCAACGCCTGAATGACTTTTGGGCCT TCAAGTTCGGTCCTGCCCTTCTGGCCTGCCAAATTCCCGAGCCCTCCCTC CTTCCCGACCTCCGCGGCTTCGTCAACAGCCAAGCACTCTCGGACGTTAC CTTCATCGTGGAGGGCCAGCGGGTTTATGCTCACAAAATCCTCTGTGTCC GCTCTCCCTACTTCCGGGCATTGTTCACCGGCGGGATGAGGGAGGCCAGA GAGGGGGAAGTGGTGCTGCCAGACGTTCGCTACCCCATTTTTCTCTCCCT CCTCGAGTACCTCTACACGGACTCCCTGACCATCGACCTGCCAACGTCCT TCCAGCTGTTTGAAGCTGCCGACCGTTTCGGAGTGGAACGGCTCAAAAAA ATGTGCGAGCACAAGATGCTCACGTCCCTCTCGCTGGACAACGCGGCTAT GATTCTATACACCGCCGATGTCTACCACGCCGCGGGCTTGCGGCAAAAGT GCTTGGGATTCATCCTCCAGAACTTCGACGCCGTGAGTAAGACGGAGGGT TTTGTGGAGATGGGCCATCGGAACGTGGATTTGGTCTTTGAGATCTTGAA GAAGCGGTAGATGAAACCGAAATGGCCCCATTCCTCACCCTTCCCTCCCT CCTTCCCTCCCTCCGATTCCTTTCCTCCCTCGCTTCCCCTCCTTCCTCAT CAGAACGACAATCTCATTTTATTTGGAGGCCACGACGGCACCAACCACTT GAATGATGTCTCCCTCTTTCACTTCCCCTCCTCCACCTGGACCGTGCTGG AGATCTCTCCCGGCGCCCTCTACCCTCCCCCCCTTCCCCGCGATTCCCAG TCGGCCGTTATCCACCACGAGAGCATGTACGTCTTCGGCGGGTCCACAGG CAGTGCCATGGATGACCTCCACGAGCTTAACCTTGAGGAAAGGCGATGGC GGCCAATCATCCCTCCGTCCGGAAGTCTCCGCCCCGGCCAACGATTCTGC CACGTGGCGTGCGTGTGGAAGCACCAGATGCTGGTTTTTGGGGGCTACGA CGGCTCTCAACGCCTGAATGACTTTTGGGCCTTCAAGTTCGGTCCTGCCC TTCTGGCCTGCCAAATTCCCGAGCCCTCCCTCCTTCCCGACCTCCGCGGC TTCGTCAACAGCCAAGCACTCTCGGACGTTACCTTCATCGTGGAGGGCCA GCGGGTTTATGCTCACAAAATCCTCTGTGTCCGCTCTCCCTACTTCCGGG CATTGTTCACCGGCGGGATGAGGGAGGCCAGAGAGGGGGAAGTGGTGCTG CCAGACGTTCGCTACCCCATTTTTCTCTCCCTCCTCGAGTACCTCTACAC GGACTCCCTGACCATCGACCTGCCAACGTCCTTCCAGCTGTTTGAAGCTG CCGACCGTTTCGGAGTGGAACGGCTCAAAAAAATGTGCGAGCACAAGATG CTCACGTCCCTCTCGCTGGACAACGCGGCTATGATTCTATACACCGCCGA TGTCTACCACGCCGCGGGCTTGCGGCAAAAGTGCTTGGGATTCATCCTCC AGAACTTCGACGCCGTGAGTAAGACGGAGGGTTTTGTGGAGATGGGCCAT CGGAACGTGGATTTGGTCTTTGAGATCTTGAAGAAGCGGTAG back to top
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