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Properties
| Property Name | Value |
|---|
| TranscriptId | 574336 |
| Track | FilteredModels2 |
| ProteinId | 574250 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:506755..507947 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_819 ID=mRNA_819|Name=jgi.p|Nanoce1779_2|574250|organism=Nannochloropsis oceanica|type=mRNA|length=1069bp
ACAGGGTCCTTCTCCCAGCCTGTCGTCAGCACTAGCTAGAGCATCATGTC
TTGGGGAAGAGGCAGCGGCAGCCCTGGAGACAGGGTAAAGAACACAAATG
ATTGGAATGAAGGCGGAGGGCAAGAAGAAGATGTCCTTGGAGGGGGATTC
GAGGACACGTACGACTCGGGCGTCGTAAGCTCAGGGGCAACCGATTGGGG
CTCGACCACCACAACGGACACGACGGGATGGGGCAGCAACGAGGAAGGCA
CCGAAGGCTTCGATGATTATGCCGACGATCGAGGTCCTAGGGCGCCTCCG
GGGCAATTGGGGGGTTCCCAGCAGCAGCAGCAACCGCCATCTCGGTATCC
TCCGCGGCAAGGGCAACCGGAGCAGGGGATGATGGACCAGGAGAAGACCC
GGAAGCGGCTGGGGTACGGGCTGTGCGTGGCCCAATTTCTGATCAATGGC
GTGCAGGGCGGTATGATTGGATCGATATTTGGTGCATTCTCGGGAGCTAG
CGAGGGGTACTCAGCAGGAGCAAGGGGCAAGCCTCTGGTGGTGCATATCC
TTTACAGGGCTCGCTCATCCGCCTTCTCGTTTGGCGTGTGGATAGGCTCC
TACAGTGGTGCCAAGTGCGCGTTTATTACCATGCGAAATGGGAAGAAGGA
TGCGTTCAACGCTTTCTTAGCCGGGGCCGTGGCTGGGGCGTTACCCGCCT
TAGCGAGCCGAAATCCCCGCACGATCCTTTTTTCGGCCATGGGCTCAGCT
GGCTTGATGGGAATGATGGAGAGCGTGGAGGGCATCTTCGGAGGGGCAGG
GAAAGGTGGTGGTGGACTAGGAGACGGTGGGGGAGACTGAATCCATGTAA
AGTTGGAGCTGAAGTGATGAAGATGTGAGGTATGTCTGTCTGTGTGCATG
TCTGCGTGTAGGATGTTTCAATAGATCAATAGGAGGAGGAAGGAAATAGG
CTTGGGGGGGGAGAGGAGGACCAGGAGGAGCAGGAGCAGGAACAGGAGCA
GGAGGACGAGCGAAGCAATCGTAAAGGAAACAAAGCAAATCATGACCCCA
GCACACCAACAAATGCGAG back to topprotein sequence of jgi.p|Nanoce1779_2|574250 >mRNA_819-protein ID=mRNA_819-protein|Name=jgi.p|Nanoce1779_2|574250|organism=Nannochloropsis oceanica|type=polypeptide|length=265bp
MSWGRGSGSPGDRVKNTNDWNEGGGQEEDVLGGGFEDTYDSGVVSSGATD
WGSTTTTDTTGWGSNEEGTEGFDDYADDRGPRAPPGQLGGSQQQQQPPSR
YPPRQGQPEQGMMDQEKTRKRLGYGLCVAQFLINGVQGGMIGSIFGAFSG
ASEGYSAGARGKPLVVHILYRARSSAFSFGVWIGSYSGAKCAFITMRNGK
KDAFNAFLAGAVAGALPALASRNPRTILFSAMGSAGLMGMMESVEGIFGG
AGKGGGGLGDGGGD* back to topmRNA from alignment at scaffold_2:506755..507947+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_819 ID=mRNA_819|Name=jgi.p|Nanoce1779_2|574250|organism=Nannochloropsis oceanica|type=mRNA|length=1193bp|location=Sequence derived from alignment at scaffold_2:506755..507947+ (Nannochloropsis oceanica)
ACAGGGTCCTTCTCCCAGCCTGTCGTCAGCACTAGCTAGAGCATCATGTC
TTGGGGAAGAGGCAGCGGCAGCCCTGGAGACAGGGTAAAGAACACAAATG
ATTGGAATGAAGGCGGAGGGCAAGAAGAAGATGTCCTTGGAGGGGGATTC
GAGGACACGTACGACTCGGGCGTCGTAAGCTCAGGGGCAACCGATTGGGG
CTCGACCACCACAACGGACACGACGGGATGGGGCAGCAACGAGGAAGGCA
CCGAAGGCTTCGATGATTATGCCGACGATCGAGGTCCTAGGGCGCCTCCG
GGGCAATTGGGGGGTTCCCAGCAGCAGCAGCAACCGCCATCTCGGTATCC
TCCGCGGCAAGGGCAACCGGAGCAGGGGATGATGGACCAGGAGAAGACCC
GGAAGCGGCTGGGGTACGGGCTGTGCGTGGCCCAATTTCTGATCAATGGC
GTGCAGGGCGGTATGATTGGATCGATATTTGGTGCATTCTCGGGAGCTAG
CGAGGGGTACTCAGCAGGAGCAAGGGGCAAGCCTCTGGTGGTGCATATCC
TTTACAGGGCTCGCTCATCCGCCTTCTCGTTTGGCGTGTGGATAGGCTCC
TACAGTGGTGCCAAGTGCGCGTTTATTACCATGCGAAATGGGAAGAAGGA
TGCGTTCAACGGTACGTGCATCTTGTGAGTTCTCTCATCCTCATTCCGCT
CCTCCATCTCTCTCCCTCCCTCTCGTCCTGCCTCTTACTTGTGTCTTCAT
TCTTCTAAGTTTCTATGCCGCACGCACACCCGCAGCTTTCTTAGCCGGGG
CCGTGGCTGGGGCGTTACCCGCCTTAGCGAGCCGAAATCCCCGCACGATC
CTTTTTTCGGCCATGGGCTCAGCTGGCTTGATGGGAATGATGGAGAGCGT
GGAGGGCATCTTCGGAGGGGCAGGGAAAGGTGGTGGTGGACTAGGAGACG
GTGGGGGAGACTGAATCCATGTAAAGTTGGAGCTGAAGTGATGAAGATGT
GAGGTATGTCTGTCTGTGTGCATGTCTGCGTGTAGGATGTTTCAATAGAT
CAATAGGAGGAGGAAGGAAATAGGCTTGGGGGGGGAGAGGAGGACCAGGA
GGAGCAGGAGCAGGAACAGGAGCAGGAGGACGAGCGAAGCAATCGTAAAG
GAAACAAAGCAAATCATGACCCCAGCACACCAACAAATGCGAG back to topCoding sequence (CDS) from alignment at scaffold_2:506755..507947+ >mRNA_819 ID=mRNA_819|Name=jgi.p|Nanoce1779_2|574250|organism=Nannochloropsis oceanica|type=CDS|length=1590bp|location=Sequence derived from alignment at scaffold_2:506755..507947+ (Nannochloropsis oceanica)
ATGTCTTGGGGAAGAGGCAGCGGCAGCCCTGGAGACAGGGTAAAGAACAC
AAATGATTGGAATGAAGGCGGAGGGCAAGAAGAAGATGTCCTTGGAGGGG
GATTCGAGGACACGTACGACTCGGGCGTCGTAAGCTCAGGGGCAACCGAT
TGGGGCTCGACCACCACAACGGACACGACGGGATGGGGCAGCAACGAGGA
AGGCACCGAAGGCTTCGATGATTATGCCGACGATCGAGGTCCTAGGGCGC
CTCCGGGGCAATTGGGGGGTTCCCAGCAGCAGCAGCAACCGCCATCTCGG
TATCCTCCGCGGCAAGGGCAACCGGAGCAGGGGATGATGGACCAGGAGAA
GACCCGGAAGCGGCTGGGGTACGGGCTGTGCGTGGCCCAATTTCTGATCA
ATGGCGTGCAGGGCGGTATGATTGGATCGATATTTGGTGCATTCTCGGGA
GCTAGCGAGGGGTACTCAGCAGGAGCAAGGGGCAAGCCTCTGGTGGTGCA
TATCCTTTACAGGGCTCGCTCATCCGCCTTCTCGTTTGGCGTGTGGATAG
GCTCCTACAGTGGTGCCAAGTGCGCGTTTATTACCATGCGAAATGGGAAG
AAGGATGCGTTCAACGCTTTCTTAGCCGGGGCCGTGGCTGGGGCGTTACC
CGCCTTAGCGAGCCGAAATCCCCGCACGATCCTTTTTTCGGCCATGGGCT
CAGCTGGCTTGATGGGAATGATGGAGAGCGTGGAGGGCATCTTCGGAGGG
GCAGGGAAAGGTGGTGGTGGACTAGGAGACGGTGGGGGAGACTGAATGTC
TTGGGGAAGAGGCAGCGGCAGCCCTGGAGACAGGGTAAAGAACACAAATG
ATTGGAATGAAGGCGGAGGGCAAGAAGAAGATGTCCTTGGAGGGGGATTC
GAGGACACGTACGACTCGGGCGTCGTAAGCTCAGGGGCAACCGATTGGGG
CTCGACCACCACAACGGACACGACGGGATGGGGCAGCAACGAGGAAGGCA
CCGAAGGCTTCGATGATTATGCCGACGATCGAGGTCCTAGGGCGCCTCCG
GGGCAATTGGGGGGTTCCCAGCAGCAGCAGCAACCGCCATCTCGGTATCC
TCCGCGGCAAGGGCAACCGGAGCAGGGGATGATGGACCAGGAGAAGACCC
GGAAGCGGCTGGGGTACGGGCTGTGCGTGGCCCAATTTCTGATCAATGGC
GTGCAGGGCGGTATGATTGGATCGATATTTGGTGCATTCTCGGGAGCTAG
CGAGGGGTACTCAGCAGGAGCAAGGGGCAAGCCTCTGGTGGTGCATATCC
TTTACAGGGCTCGCTCATCCGCCTTCTCGTTTGGCGTGTGGATAGGCTCC
TACAGTGGTGCCAAGTGCGCGTTTATTACCATGCGAAATGGGAAGAAGGA
TGCGTTCAACGCTTTCTTAGCCGGGGCCGTGGCTGGGGCGTTACCCGCCT
TAGCGAGCCGAAATCCCCGCACGATCCTTTTTTCGGCCATGGGCTCAGCT
GGCTTGATGGGAATGATGGAGAGCGTGGAGGGCATCTTCGGAGGGGCAGG
GAAAGGTGGTGGTGGACTAGGAGACGGTGGGGGAGACTGA back to top
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