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Properties
| Property Name | Value |
|---|
| TranscriptId | 602845 |
| Track | FilteredModels2 |
| ProteinId | 602759 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_25 | supercontig | scaffold_25:357029..362278 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8183 ID=mRNA_8183|Name=jgi.p|Nanoce1779_2|602759|organism=Nannochloropsis oceanica|type=mRNA|length=1218bp
ACAGGACTCTCGGTACCCAAACCAGCCCTCTCTCCAACACAAGATGCGCA
TGTCCATGCTCCGCCTAGGTGGGCTCTTCCTCGCCGTGGCCCTCTTTGGT
GCCTGTACGCTCCCCAATGTCGAGGCCAACAAGACGCCCAAGGTCGCAAG
GGTCCGCTATTCCAAGGCCAAGGCCTTCACCGCATGCTTCAGCAACATTA
ACTTCGAGGAGGACGAGGGAAACGACGACGACATTGATTTTTTCCAATGG
GAAGCTCAGGTTTTCGACTGCTCGGACAACCCAGCAATCGACACTCCAGT
GGGGTCGTCCACCTTTGCTTGCAGCTATGCCGACGACCAGGATGAAAATT
TCCGCATTGGTGTTTGCAATGGGAACATTGTGATCGCTGGCAATGCGCTT
TACGTGTCCTTCACCATGGACCGCGAGTAAGTGCTATTGTGTGCATTATT
GTTGTTGTAATGATATCATGATTATTATTTTATCTTTATCAAAAGCTCAG
CTCTAGGCAGTGGCGTGCCTAGTTACTTTTGGGGTGCGAGAGAGATCTAG
AGAAAAGTGATCTTTATGCTCGTTTCGCTCCTCTGACTCTTCATGCCTTG
CCCAAACCTCACCTTAACCAGTGACGTGTCGGAAGACCAATTGTTCCCTA
GCCGAGCCCAGTACCCGGCCATAGTCGGGAGTACCGGGCTCTTCCCCAGG
AATCCTGTCAAGTACGATGATATCGAGTTCGTGAATGGCACGTCGACGGA
TTTCCCCGTGAGTGTCACCCTCACATATAAGGGGAGGCAGTACAACCCCA
TGGTGCCCGTCACCCTGAAGTAGAGTATGCGGGAGACCGTGCTTTAGCCT
ACAGTTAATGCCGTGTGTTTGCTTGATGGAAAGAGGGGGCTTTTGAGAAT
CTGTCTATGTCGGTTATGTGTGACTTTGATGCCTGTCTTTTCATGTTTCA
TTTAGTCATGTCGTATGTGTTTGTGCCAACTAAGTAATCGCTGATCTATG
TGCTACGCATATTAATATCCATGGAGCGGGCTTAGTCAATGTTCGTGTCG
TGTTTGTATGTGAGATGACCGTGACGCGTAGTGGTGCGAGTCCTTTTTCG
TCAAAAAGAGCTACAAGGCACTACACTGATCCGGCTTCGTCCATCTCCTT
TCCTTATCTTATCTGGCTGTGCAATTTCTGTTATTGAAATCAATGAAAAA
AAAATGGAAAGACGAGAA back to topprotein sequence of jgi.p|Nanoce1779_2|602759 >mRNA_8183-protein ID=mRNA_8183-protein|Name=jgi.p|Nanoce1779_2|602759|organism=Nannochloropsis oceanica|type=polypeptide|length=129bp
MRMSMLRLGGLFLAVALFGACTLPNVEANKTPKVARVRYSKAKAFTACFS
NINFEEDEGNDDDIDFFQWEAQVFDCSDNPAIDTPVGSSTFACSYADDQD
ENFRIGVCNGNIVIAGNALYVSFTMDRE* back to topmRNA from alignment at scaffold_25:357029..362278- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8183 ID=mRNA_8183|Name=jgi.p|Nanoce1779_2|602759|organism=Nannochloropsis oceanica|type=mRNA|length=5250bp|location=Sequence derived from alignment at scaffold_25:357029..362278- (Nannochloropsis oceanica)
ACAGGACTCTCGGTACCCAAACCAGCCCTCTCTCCAACACAAGATGCGCA
TGTCCATGCTCCGCCTAGGTGGGCTCTTCCTCGCCGTGGCCCTCTTTGGT
GCCTGTACGCTCCCCAATGTCGAGGCCAACAAGACGCGTAAGTCTTGGGG
GAAGGTGCTTTGCCCTCTGCAGAGGTGGTTCCTGTCCACATAAGTTGAAC
AGAGCTTGAAAAGGCAGCAGTAATGCAGCACCCATCCGTCTCATCTCCAC
ACACCCTCACCCTTGAAACACAGCCAAGGTCGCAAGGGTCCGCTATTCCA
AGGCCAAGGCCTTCACCGCATGCTTCAGCAACATTAACTTCGAGGAGGAC
GAGGGAAACGACGACGACATTGATTTTTTCCAATGGGAAGCTCAGGTTTT
CGACTGCTCGGACAACGTACGTACTTTTCATGTGCTCCTCGTCCTTGACC
TTGAGCCCATCTGTGCCCATGTTTGAAGCCCACTATTGACCCTTTTTCAC
ACACGACGTTTCATATAGCCAGCAATCGACACTCCAGTGGGGTCGTCCAC
CTTTGCTTGCAGCTATGCCGACGACCAGGATGAAAATTTCCGCATTGGTG
TTTGCAATGGGAACATTGTGATCGCTGGCAATGCGCTTTACGTGTCCTTC
ACCATGGACCGCGAGTAAGTGCTATTGTGTGCATTATTGTTGTTGTAATG
ATATCATGATTATTATTTTATCTTTATCAAAAGCTCAGCTCTAGGCAGTG
GCGTGCCTAGTTACTTTTGGGGTGCGAGAGAGATCTAGAGAAAAGTGATC
TTTATGCTCGTTTCGCTCCTCTGACTCTTCATGCCTTGCCCAAACCTCAC
CTTAACCAGTGACGTGTCGGAAGACCAATTGTTCCCTAGCCGAGCCCAGT
ACCCGGCCATAGTCGGGAGTACCGGGCTCTTCCCCAGGAATCCTGTCAAG
TACGATGATATCGAGTTCGTGAATGTACGTACACTACATTTAGGTCTCTT
CTCTTTCCGAAACACACACATTTAACCCATCTTCAACTCATACACTACAC
AACAGGGCACGTCGACGGATTTCCCCGTGAGTGTCACCCTCACATATAAG
GGGAGGCAGTACAACCCCATGGTGCCCGTCACCCTGAAGTAGAGTATGCG
GGAGACCGTGCTTTAGCCTACAGTTAATGCCGTGTGTTTGCTTGATGGAA
AGAGGGGGCTTTTGAGAATCTGTCTATGTCGGTTATGTGTGACTTTGATG
CCTGTCTTTTCATGTTTCATTTAGTCATGTCGTGTGTGTTTGTGCCAACT
AAGTAATCGCTGATCTATGTGCTACGCATATTAATATCCATGGAGCGGGC
TTAGTCAATGTTCGTGTCGTGTTTGTATGTGAGATGACCGTGACGCGTAG
TGGTGCGAGTCCTTTTTCGTCAAAAAGAGCTACAAGGCACTACACTGATC
CGGCTTCGTCCATCTCCTTTCCTTATCTTATCTGGCTGTGCAATTTCTGT
TATTGAAATCAATGAAAAAAAAATGGAAAGACGAGAAGGGGGCATCTGCG
CGCAGTTTTCTTTGGGTTTATTTCATGTTTTTTCCCCTTTCTCCTTGATC
ATCTAATTTTGTCATACTCCTTAAATTTCACCGACTCTTCTTGGGCGCTT
GTACATAGAGTCTGCTTTATACTGATGCAGCGTGTAAAAGTATACAAAAT
TTTGCCGCTTTCCCTTACTCCGCTTACGCCCCCCTCCACGAGGCACCATG
GTAATTTATCGTACCATTTACCTTTGTGCTGCCCTATCTCCACATTTCTT
GACGAACTATACACGAAAGCTTATCGGGTCTCCAGGGACAAAGTGCCCAT
GTCATTATCATGAAGGAATGACCCACTGATTTCGGACATGTTCGAAGGAA
CAGAATAGGAGTGGTCTTGGCTTCTCTCTGAAAGGCATGATGTCATCATT
CGAGCCAACACCAGCAGTGGCGTGGCCTTTGTGACCGGCATGAGAGGTGG
AAGAGGGCAACTATTTGCTGTAAGTGATTGTTTGTGGCTGTGCGCTTGCG
AATTGGGATGTAATTGCTTGCGAGAAGAGAGGTGAAAGGTGAATCAAATA
GCCGATGCAAGCGCCAGCATGCACCAATGCGAGTAAAACCAGGCAAGGAA
GAAAACGTTGCCGGCTGACCATGCTTGGTGGCCAGGCAAATAACAGTGAC
AGTAATTGCCGTGCACACCAGCGTCGAAACTGTCGAGTTTTGTGAAGGAC
TTGAAGGAACGCAGCACTCTCCTCGTGTGTCGTCACGTTGATGTTCCGAG
TCGTTCGCTCGGAGTTGTTGCCCGCCGCTGTGCCAGCATAGTTGCGGAGT
TTGTGTCCAAGGCGAGTGTGCTATGTTTTCTCGTCCTTGTATTGATTCGA
TTAGATGCTTTGTGGTGGCGATTAAACCCCATCCAAAATGTATCTTTTTT
TATTTTATTCTTTTATAATTTTGAATATTTCCCTACTATTCCAAAGAAAG
GGTCTTCATCGCCGCCTTTGCAGTGGGTGACGAGATTTGTGTTACGGGCA
TTTCCATGATAACAGTATCAAAGCTCTACTTAATACCAAGTTGGAGGCAA
CGAAATACATTCCATTTTGTGAAGCATCTACCGGCAGATGCCTTTCATCC
TCCGAGCAAGCATGTCCGTTACTGGCGGATGAATGTTTACTGGCTCTCCC
ATATATATGCATGCAACAAGGCATCGTAGCTCATATCATTAGCTACATTT
TCTGCACACAGCTCGATGATTTTATCCCTCGTGAGTCATTTCCGGTCATT
TGCTTCAGGAATGAGAGCCTGCGAGACGATCTCTTTCACAAACAAATTGT
TGTAAATTCAACAGCTTTTCCCGCCAGGCAAAACGCAACTGACGGTGGCA
ACGGACTGAAGAAAATAAAACCCCCCAAAAAACTGTCGCGATCCTGGTGC
TTTGTTTCCTCTGCGTTTGTTTGGCTCTTGCGTGCCTATTGCAGTCTTAT
TTCTCTTGCCCTCGTCCTGTGCCATGCACGGACATTCCATGCTCACACTC
TTGCGTACGTGGCGGCTGACTTAGGTGTTCGAGCTTGCTACATGTGCGGC
ATAGGGCTCGACCATATGCAAGGCCATGAACTAGGCGCCGTCTCTTGTGA
TACTGGGCAAAGTGGTTACGCCTTACGTCTCCTACACCTTTCCACCAAAT
ATGTCGCTCCCCTTCAAGAATATGGCACCCTCTGCTGGTGATGGTAATGA
GAGAATTGAAACGCGGCTTGATAAAAAGATTCAGATTTCAGACCGCGTTA
TGTTGACTAGTAGAAGACGTCGCCGCGAGGCGCAAGGTTTATATATAATA
TATATCAACATATTGTGACGGGGTGAAGCAAACCACAACTCAACTCACCG
CGCTCTTCCTGCGTACTTGAAGCTGCATGAATCAACGCGGAGCGTCGGTC
AGCAGGCCGCCAGGTACTACAAACCAAGCATCGCGACCCGGAGCCATTAT
TGGTAGCTTCTTTTTCCACTGGGATGGACCCCAATTTAAGCCAAGGGCTA
ACCCCGAGAGCAATCACTAGGTAGCCATGCAAGCGCTGCCCTTGCGGCCT
TAACCTGCAGCCAGCTAATATAGATCTACTTGATATTTGTCCAGTCGTAA
GCAAGAGATATTCCGCGCTTCATCACATTCCCCCGCCCGTTTTCTGTCGC
TATCATCCCAAACACAGGACTCTCGGTACCCAAACCAGCCCTCTCTCCAA
CACAAGATGCGCATGTCCATGCTCCGCCTAGGTGGGCTCTTCCTCGCCGT
GGCCCTCTTTGGTGCCTGTACGCTCCCCAATGTCGAGGCCAACAAGACGC
GTAAGTCTTGGGGGAAGGTGCTTTGCCCTCTGCAGAGGTGGTTCCTGTCC
ACATAAGTTGAACAGAGCTTGAAAAGGCAGCAGTAATGCAGCACCCATCC
GTCTCATCTCCACACACCCTCACCCTTGAAACACAGCCAAGGTCGCAAGG
GTCCGCTATTCCAAGGCCAAGGCCTTCACCGCATGCTTCAGCAACATTAA
CTTCGAGGAGGACGAGGGAAGCGACGACGACATTGATTTTTTCCAATGGG
AAGCTCAGGTTTTCGACTGCTCGGACAACGTACGTACTTTTCATGTGCTC
CTCGTCCTTGACCTTAAGCCCATCTGTGTCCATGTTTGAAGCCCACTATT
GACCCTTTTTCACACACGACGTTTCATATAGCCAGCAATCGACACTCCAG
TGGGGTCGTCCACCTTTGCTTGCAGCTATGTCGAAGAGCAGGATGATAAT
TTCCGTATTGGTGTTTGCAATGGGAACATTGTGATCGCTGGCAATGCGCT
TTACGTGTCCTTCACCATGGACCGCGAGTAAGTGCTATTGTGTGCATTAT
TGTTGTTGTAATGATATCATGATTATTATTTTATCTTTATCAAAAGCTCA
GCTCTAGGCAGTGGCGTGCCTAGTTACTTTTGGGGTGCGAGAGAGATCTA
GAGAAAAGTGATCTTTATGCTCGTTTCGCTCCTCTGACTCTTCATGCCTT
GCCCAAACCTCACCTTAACCAGTGACGTGTCGGAAGACCAATTGTTCCCT
AGCCGAGCCCAGTACCCGGCCATAGTCGGGAGTACCGGGCTCTTCCCCAG
GAATCCTGTCAAGTACGATGATATCGAGTTCGTGAATGTACGTACACTAC
ATTTAGGTCTCTTCTCTTTCCGAAACACACACATTTAACCCATCTTCAAC
TCATACACTACACAACAGGGCACGTCGACGGATTTCCCCGTGAGTGTCAC
CCTCACATATAAGGGGAGGCAGTACAACCCCATGGTGCCCGTCACCCTGA
AGTAGAGTATGCGGGAGACCGTGCTTTAGCCTACAGTTAATGCCGTGTGT
TTGCTTGATGGAAAGAGGGGGCTTTTGAGAATCTGTCTATGTCGGTTATG
TGTGACTTTGATGCCTGTCTTTTCATGTTTCATTTAGTCATGTCGTATGT
GTTTGTGCCAACTAAGTAATCGCTGATCTATGTGCTACGCATATTAATAT
CCATGGAGCGGGCTTAGTCAATGTTCGTGTCGTGTTTGTATGTGAGATGA
CCGTGACGCGTAGTGGTGCGAGTCCTTTTTCGTCAAAAAGAGCTACAAGG
CACTACACTGATCCGGCTTCGTCCATCTCCTTTCCTTATCTTATCTGGCT
GTGCAATTTCTGTTATTGAAATCAATGAAAAAAAAATGGAAAGACGAGAA
back to topCoding sequence (CDS) from alignment at scaffold_25:357029..362278- >mRNA_8183 ID=mRNA_8183|Name=jgi.p|Nanoce1779_2|602759|organism=Nannochloropsis oceanica|type=CDS|length=1161bp|location=Sequence derived from alignment at scaffold_25:357029..362278- (Nannochloropsis oceanica)
CCAGCAATCGACACTCCAGTGGGGTCGTCCACCTTTGCTTGCAGCTATGC
CGACGACCAGGATGAAAATTTCCGCATTGGTGTTTGCAATGGGAACATTG
TGATCGCTGGCAATGCGCTTTACGTGTCCTTCACCATGGACCGCGAGTAA
CCAAGGTCGCAAGGGTCCGCTATTCCAAGGCCAAGGCCTTCACCGCATGC
TTCAGCAACATTAACTTCGAGGAGGACGAGGGAAACGACGACGACATTGA
TTTTTTCCAATGGGAAGCTCAGGTTTTCGACTGCTCGGACAACATGCGCA
TGTCCATGCTCCGCCTAGGTGGGCTCTTCCTCGCCGTGGCCCTCTTTGGT
GCCTGTACGCTCCCCAATGTCGAGGCCAACAAGACGCCCAGCAATCGACA
CTCCAGTGGGGTCGTCCACCTTTGCTTGCAGCTATGCCGACGACCAGGAT
GAAAATTTCCGCATTGGTGTTTGCAATGGGAACATTGTGATCGCTGGCAA
TGCGCTTTACGTGTCCTTCACCATGGACCGCGAGTAACCAAGGTCGCAAG
GGTCCGCTATTCCAAGGCCAAGGCCTTCACCGCATGCTTCAGCAACATTA
ACTTCGAGGAGGACGAGGGAAACGACGACGACATTGATTTTTTCCAATGG
GAAGCTCAGGTTTTCGACTGCTCGGACAACATGCGCATGTCCATGCTCCG
CCTAGGTGGGCTCTTCCTCGCCGTGGCCCTCTTTGGTGCCTGTACGCTCC
CCAATGTCGAGGCCAACAAGACGCCCAGCAATCGACACTCCAGTGGGGTC
GTCCACCTTTGCTTGCAGCTATGCCGACGACCAGGATGAAAATTTCCGCA
TTGGTGTTTGCAATGGGAACATTGTGATCGCTGGCAATGCGCTTTACGTG
TCCTTCACCATGGACCGCGAGTAACCAAGGTCGCAAGGGTCCGCTATTCC
AAGGCCAAGGCCTTCACCGCATGCTTCAGCAACATTAACTTCGAGGAGGA
CGAGGGAAACGACGACGACATTGATTTTTTCCAATGGGAAGCTCAGGTTT
TCGACTGCTCGGACAACATGCGCATGTCCATGCTCCGCCTAGGTGGGCTC
TTCCTCGCCGTGGCCCTCTTTGGTGCCTGTACGCTCCCCAATGTCGAGGC
CAACAAGACGC back to top
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