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Properties
| Property Name | Value |
|---|
| TranscriptId | 602754 |
| Track | FilteredModels2 |
| ProteinId | 602668 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_25 | supercontig | scaffold_25:295314..296898 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8156 ID=mRNA_8156|Name=jgi.p|Nanoce1779_2|602668|organism=Nannochloropsis oceanica|type=mRNA|length=1102bp
ACAGCCACTGTGGCAGCAGTCAGCATGTCTTCCGCCTCTGTGCCAGCCAT
ATCTATGCCGGAAGGCGACATTCCGGTAGCAGCGGCCTCGTCTTCCAAGG
ATGACGAGTCCTTGTCCACCATACCCCCAGCTAAGCCGCAATCCTACATG
CAACAAGCTTTGGGTCTCTTCCGCGCCTCCTGTGTCTTTGGTATCCTCTT
AGGAGCCACAGCTACAAACGTCACGGTTGCTATGCTCATCCACGCCGTGA
CCCGGGATAGGAAAAAGGCGCAAGGTCGATGCGTGTACAGCATATGCATG
ATCACCAGCTGGGCTCTCAAATTTATTCCCTGGATCACCATTAAAATGAA
ATTGCCCCCGCAACCCATCGACTTCGAGCAATTCCTGCTCACGTCCAACC
ACATCTCCTTTATGGATCTGTTCTTCATCCAGCATACCATGTACCATTCG
CTTTCCCGACAAGCGATTCAGCGCGTCCGTCTCATTTACTGGGAGAAACT
CGCCTCTATCCCTCTTGTCAAAGGTATCTTCACCCTGACTGGCGGTGTGC
CGATTAAGATTTTAGGGAGCACGTCGCTGAAGGAGGGGGACAACAAGTAT
TGCAAAGATAGCGTCAAGGCCGTCTACGGCGCCGTCGACAAGGCAATCGT
GGAAGACAAGCTCTCCATCGCCCTGTCGTTCGAGGGGCGGCGCAACCCCA
ACCCGCCTACCCTCAGCAAGATCCAACGGGGCATGTTCAAAATGCACCAG
CAATACAAGATTCCTGTCGTGCTTATCCGTCTTCGAGGCGTAGAGAAAAT
CTGGGCTGCTGAGGGTCTACCAACAGGAACAGGTGTGGTGGAGTGCACCA
TGCTGCCTCACGCGTACATGTGGCCGACGGCCGAGGCTTACGAGGAGGGG
TTACGCGCCGTGTACGAACGAGGAGAAGACGGTCCGCCGCCCTCGCCCCT
TGCCTCCTCCCCCCCCGTTACAGGCGCCATGGCAAATGTGCTGGGAATGT
TGGAGAAGGAGGCGGTTCGGGTGCTTGAGGGAGGGAGGGAGGGAGAGAGG
GAGGGCGATCTGGCGATTACGCCGGTTGAGTAGGGCTGGAACAAGGGAAG
GG back to topprotein sequence of jgi.p|Nanoce1779_2|602668 >mRNA_8156-protein ID=mRNA_8156-protein|Name=jgi.p|Nanoce1779_2|602668|organism=Nannochloropsis oceanica|type=polypeptide|length=353bp
MSSASVPAISMPEGDIPVAAASSSKDDESLSTIPPAKPQSYMQQALGLFR
ASCVFGILLGATATNVTVAMLIHAVTRDRKKAQGRCVYSICMITSWALKF
IPWITIKMKLPPQPIDFEQFLLTSNHISFMDLFFIQHTMYHSLSRQAIQR
VRLIYWEKLASIPLVKGIFTLTGGVPIKILGSTSLKEGDNKYCKDSVKAV
YGAVDKAIVEDKLSIALSFEGRRNPNPPTLSKIQRGMFKMHQQYKIPVVL
IRLRGVEKIWAAEGLPTGTGVVECTMLPHAYMWPTAEAYEEGLRAVYERG
EDGPPPSPLASSPPVTGAMANVLGMLEKEAVRVLEGGREGEREGDLAITP
VE* back to topmRNA from alignment at scaffold_25:295314..296898+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8156 ID=mRNA_8156|Name=jgi.p|Nanoce1779_2|602668|organism=Nannochloropsis oceanica|type=mRNA|length=1585bp|location=Sequence derived from alignment at scaffold_25:295314..296898+ (Nannochloropsis oceanica)
ACAGCCACTGTGGCAGCAGTCAGCATGTCTTCCGCCTCTGTGCCAGCCAT
ATCTATGCCGGAAGGCGACATTCCGGTAGCAGCGGCCTCGTCTTCCAAGG
ATGACGAGTCCTTGTCCACCATACCCCCAGCTAAGCCGCAATCCTACATG
CAACAAGCTTTGGGTCTCTTCCGCGCCTCCTGTGTCTTTGGTATCCTCTT
AGGAGCCACAGCTACAAACGTCACGGTTGCTATGCTCATCCACGCCGTGA
CCCGGGATAGGAAAAAGGCGCAAGGTATGTTGGAAGTGGGGCTAGGATTT
TGCCATCTTTCCCCCTTTTCCCCTTTTCCCCACAGCTCTCATCTTTTCCT
GGTCCCCTCTGACAGTTGTACGCATATTTCTACATACATGCATATCTCCT
GGCAGGTCGATGCGTGTACAGCATATGCATGATCACCAGCTGGGCTCTCA
AATTTATTCCCTGGATCACCATTAAAATGAAATTGCCCCCGCAACCCATC
GACTTCGAGCAATTCCTGCTCACGTCCAACCACATCTCCTTTATGGATCT
GTTCTTCATCCAGGTAAGATTCTCACAAGCCATTCCATCTTCCCTCCTCC
TAACGTACCGCTAATTTTTCCACCCTTCCTCCTTCCCTTCCTCCCTACCA
GCATACCATGTACCATTCGCTTTCCCGACAAGCGATTCAGCGCGTCCGTC
TCATTTACTGGGAGAAACTCGCCTCTATCCCTCTTGTCAAAGGTATCTTC
ACCCTGACTGGCGGTGTGCCGATTAAGATTTTAGGGAGCACGTCGCTGAA
GGAGGGGGACAACAAGTATTGCAAAGATGTACGTCAGTCTGTCGGTTGCC
GCCCTCTCCCCTTCTCCTCCTCCCTTCTCTCCCCTTGTCGGCCTATTTCT
CTTTTTCCATGGTTCAAAATTTCTCATCCCCTCTTTGTCACTTCCTGCCT
CCCTGGGCAGAGCGTCAAGGCCGTCTACGGCGCCGTCGACAAGGCAATCG
TGGAAGACAAGCTCTCCATCGCCCTGTCGTTCGAGGGGCGGCGCAACCCC
AACCCGCCTACCCTCAGCAAGATCCAACGGGGCATGTTCAAAATGCACCA
GCAATACAAGATTCCTGTCGTGCTTATCCGTCTTCGAGGTTCGTTATCCC
GTTACCCCTCCACCCCGCCTTCCTTCCTTCCTTCCCTCTCTTCCCTCCGC
TTCTCACTGTTAGTCTATCCTGAGCTGCAACCCACTCATCCTTCCTTCCA
TTCCTCCCTCCATTCCTCAGGCGTAGAGAAAATCTGGGCTGCTGAGGGTC
TACCAACAGGAACAGGTGTGGTGGAGTGCACCATGCTGCCTCACGCGTAC
ATGTGGCCGACGGCCGAGGCTTACGAGGAGGGGTTACGCGCCGTGTACGA
ACGAGGAGAAGACGGTCCGCCGCCCTCGCCCCTTGCCTCCTCCCCCCCCG
TTACAGGCGCCATGGCAAATGTGCTGGGAATGTTGGAGAAGGAGGCGGTT
CGGGTGCTTGAGGGAGGGAGGGAGGGAGAGAGGGAGGGCGATCTGGCGAT
TACGCCGGTTGAGTAGGGCTGGAACAAGGGAAGGG back to topCoding sequence (CDS) from alignment at scaffold_25:295314..296898+ >mRNA_8156 ID=mRNA_8156|Name=jgi.p|Nanoce1779_2|602668|organism=Nannochloropsis oceanica|type=CDS|length=5295bp|location=Sequence derived from alignment at scaffold_25:295314..296898+ (Nannochloropsis oceanica)
ATGTCTTCCGCCTCTGTGCCAGCCATATCTATGCCGGAAGGCGACATTCC
GGTAGCAGCGGCCTCGTCTTCCAAGGATGACGAGTCCTTGTCCACCATAC
CCCCAGCTAAGCCGCAATCCTACATGCAACAAGCTTTGGGTCTCTTCCGC
GCCTCCTGTGTCTTTGGTATCCTCTTAGGAGCCACAGCTACAAACGTCAC
GGTTGCTATGCTCATCCACGCCGTGACCCGGGATAGGAAAAAGGCGCAAG
GTCGATGCGTGTACAGCATATGCATGATCACCAGCTGGGCTCTCAAATTT
ATTCCCTGGATCACCATTAAAATGAAATTGCCCCCGCAACCCATCGACTT
CGAGCAATTCCTGCTCACGTCCAACCACATCTCCTTTATGGATCTGTTCT
TCATCCAGCATACCATGTACCATTCGCTTTCCCGACAAGCGATTCAGCGC
GTCCGTCTCATTTACTGGGAGAAACTCGCCTCTATCCCTCTTGTCAAAGG
TATCTTCACCCTGACTGGCGGTGTGCCGATTAAGATTTTAGGGAGCACGT
CGCTGAAGGAGGGGGACAACAAGTATTGCAAAGATAGCGTCAAGGCCGTC
TACGGCGCCGTCGACAAGGCAATCGTGGAAGACAAGCTCTCCATCGCCCT
GTCGTTCGAGGGGCGGCGCAACCCCAACCCGCCTACCCTCAGCAAGATCC
AACGGGGCATGTTCAAAATGCACCAGCAATACAAGATTCCTGTCGTGCTT
ATCCGTCTTCGAGGCGTAGAGAAAATCTGGGCTGCTGAGGGTCTACCAAC
AGGAACAGGTGTGGTGGAGTGCACCATGCTGCCTCACGCGTACATGTGGC
CGACGGCCGAGGCTTACGAGGAGGGGTTACGCGCCGTGTACGAACGAGGA
GAAGACGGTCCGCCGCCCTCGCCCCTTGCCTCCTCCCCCCCCGTTACAGG
CGCCATGGCAAATGTGCTGGGAATGTTGGAGAAGGAGGCGGTTCGGGTGC
TTGAGGGAGGGAGGGAGGGAGAGAGGGAGGGCGATCTGGCGATTACGCCG
GTTGAGTAGATGTCTTCCGCCTCTGTGCCAGCCATATCTATGCCGGAAGG
CGACATTCCGGTAGCAGCGGCCTCGTCTTCCAAGGATGACGAGTCCTTGT
CCACCATACCCCCAGCTAAGCCGCAATCCTACATGCAACAAGCTTTGGGT
CTCTTCCGCGCCTCCTGTGTCTTTGGTATCCTCTTAGGAGCCACAGCTAC
AAACGTCACGGTTGCTATGCTCATCCACGCCGTGACCCGGGATAGGAAAA
AGGCGCAAGGTCGATGCGTGTACAGCATATGCATGATCACCAGCTGGGCT
CTCAAATTTATTCCCTGGATCACCATTAAAATGAAATTGCCCCCGCAACC
CATCGACTTCGAGCAATTCCTGCTCACGTCCAACCACATCTCCTTTATGG
ATCTGTTCTTCATCCAGCATACCATGTACCATTCGCTTTCCCGACAAGCG
ATTCAGCGCGTCCGTCTCATTTACTGGGAGAAACTCGCCTCTATCCCTCT
TGTCAAAGGTATCTTCACCCTGACTGGCGGTGTGCCGATTAAGATTTTAG
GGAGCACGTCGCTGAAGGAGGGGGACAACAAGTATTGCAAAGATAGCGTC
AAGGCCGTCTACGGCGCCGTCGACAAGGCAATCGTGGAAGACAAGCTCTC
CATCGCCCTGTCGTTCGAGGGGCGGCGCAACCCCAACCCGCCTACCCTCA
GCAAGATCCAACGGGGCATGTTCAAAATGCACCAGCAATACAAGATTCCT
GTCGTGCTTATCCGTCTTCGAGGCGTAGAGAAAATCTGGGCTGCTGAGGG
TCTACCAACAGGAACAGGTGTGGTGGAGTGCACCATGCTGCCTCACGCGT
ACATGTGGCCGACGGCCGAGGCTTACGAGGAGGGGTTACGCGCCGTGTAC
GAACGAGGAGAAGACGGTCCGCCGCCCTCGCCCCTTGCCTCCTCCCCCCC
CGTTACAGGCGCCATGGCAAATGTGCTGGGAATGTTGGAGAAGGAGGCGG
TTCGGGTGCTTGAGGGAGGGAGGGAGGGAGAGAGGGAGGGCGATCTGGCG
ATTACGCCGGTTGAGTAGATGTCTTCCGCCTCTGTGCCAGCCATATCTAT
GCCGGAAGGCGACATTCCGGTAGCAGCGGCCTCGTCTTCCAAGGATGACG
AGTCCTTGTCCACCATACCCCCAGCTAAGCCGCAATCCTACATGCAACAA
GCTTTGGGTCTCTTCCGCGCCTCCTGTGTCTTTGGTATCCTCTTAGGAGC
CACAGCTACAAACGTCACGGTTGCTATGCTCATCCACGCCGTGACCCGGG
ATAGGAAAAAGGCGCAAGGTCGATGCGTGTACAGCATATGCATGATCACC
AGCTGGGCTCTCAAATTTATTCCCTGGATCACCATTAAAATGAAATTGCC
CCCGCAACCCATCGACTTCGAGCAATTCCTGCTCACGTCCAACCACATCT
CCTTTATGGATCTGTTCTTCATCCAGCATACCATGTACCATTCGCTTTCC
CGACAAGCGATTCAGCGCGTCCGTCTCATTTACTGGGAGAAACTCGCCTC
TATCCCTCTTGTCAAAGGTATCTTCACCCTGACTGGCGGTGTGCCGATTA
AGATTTTAGGGAGCACGTCGCTGAAGGAGGGGGACAACAAGTATTGCAAA
GATAGCGTCAAGGCCGTCTACGGCGCCGTCGACAAGGCAATCGTGGAAGA
CAAGCTCTCCATCGCCCTGTCGTTCGAGGGGCGGCGCAACCCCAACCCGC
CTACCCTCAGCAAGATCCAACGGGGCATGTTCAAAATGCACCAGCAATAC
AAGATTCCTGTCGTGCTTATCCGTCTTCGAGGCGTAGAGAAAATCTGGGC
TGCTGAGGGTCTACCAACAGGAACAGGTGTGGTGGAGTGCACCATGCTGC
CTCACGCGTACATGTGGCCGACGGCCGAGGCTTACGAGGAGGGGTTACGC
GCCGTGTACGAACGAGGAGAAGACGGTCCGCCGCCCTCGCCCCTTGCCTC
CTCCCCCCCCGTTACAGGCGCCATGGCAAATGTGCTGGGAATGTTGGAGA
AGGAGGCGGTTCGGGTGCTTGAGGGAGGGAGGGAGGGAGAGAGGGAGGGC
GATCTGGCGATTACGCCGGTTGAGTAGATGTCTTCCGCCTCTGTGCCAGC
CATATCTATGCCGGAAGGCGACATTCCGGTAGCAGCGGCCTCGTCTTCCA
AGGATGACGAGTCCTTGTCCACCATACCCCCAGCTAAGCCGCAATCCTAC
ATGCAACAAGCTTTGGGTCTCTTCCGCGCCTCCTGTGTCTTTGGTATCCT
CTTAGGAGCCACAGCTACAAACGTCACGGTTGCTATGCTCATCCACGCCG
TGACCCGGGATAGGAAAAAGGCGCAAGGTCGATGCGTGTACAGCATATGC
ATGATCACCAGCTGGGCTCTCAAATTTATTCCCTGGATCACCATTAAAAT
GAAATTGCCCCCGCAACCCATCGACTTCGAGCAATTCCTGCTCACGTCCA
ACCACATCTCCTTTATGGATCTGTTCTTCATCCAGCATACCATGTACCAT
TCGCTTTCCCGACAAGCGATTCAGCGCGTCCGTCTCATTTACTGGGAGAA
ACTCGCCTCTATCCCTCTTGTCAAAGGTATCTTCACCCTGACTGGCGGTG
TGCCGATTAAGATTTTAGGGAGCACGTCGCTGAAGGAGGGGGACAACAAG
TATTGCAAAGATAGCGTCAAGGCCGTCTACGGCGCCGTCGACAAGGCAAT
CGTGGAAGACAAGCTCTCCATCGCCCTGTCGTTCGAGGGGCGGCGCAACC
CCAACCCGCCTACCCTCAGCAAGATCCAACGGGGCATGTTCAAAATGCAC
CAGCAATACAAGATTCCTGTCGTGCTTATCCGTCTTCGAGGCGTAGAGAA
AATCTGGGCTGCTGAGGGTCTACCAACAGGAACAGGTGTGGTGGAGTGCA
CCATGCTGCCTCACGCGTACATGTGGCCGACGGCCGAGGCTTACGAGGAG
GGGTTACGCGCCGTGTACGAACGAGGAGAAGACGGTCCGCCGCCCTCGCC
CCTTGCCTCCTCCCCCCCCGTTACAGGCGCCATGGCAAATGTGCTGGGAA
TGTTGGAGAAGGAGGCGGTTCGGGTGCTTGAGGGAGGGAGGGAGGGAGAG
AGGGAGGGCGATCTGGCGATTACGCCGGTTGAGTAGATGTCTTCCGCCTC
TGTGCCAGCCATATCTATGCCGGAAGGCGACATTCCGGTAGCAGCGGCCT
CGTCTTCCAAGGATGACGAGTCCTTGTCCACCATACCCCCAGCTAAGCCG
CAATCCTACATGCAACAAGCTTTGGGTCTCTTCCGCGCCTCCTGTGTCTT
TGGTATCCTCTTAGGAGCCACAGCTACAAACGTCACGGTTGCTATGCTCA
TCCACGCCGTGACCCGGGATAGGAAAAAGGCGCAAGGTCGATGCGTGTAC
AGCATATGCATGATCACCAGCTGGGCTCTCAAATTTATTCCCTGGATCAC
CATTAAAATGAAATTGCCCCCGCAACCCATCGACTTCGAGCAATTCCTGC
TCACGTCCAACCACATCTCCTTTATGGATCTGTTCTTCATCCAGCATACC
ATGTACCATTCGCTTTCCCGACAAGCGATTCAGCGCGTCCGTCTCATTTA
CTGGGAGAAACTCGCCTCTATCCCTCTTGTCAAAGGTATCTTCACCCTGA
CTGGCGGTGTGCCGATTAAGATTTTAGGGAGCACGTCGCTGAAGGAGGGG
GACAACAAGTATTGCAAAGATAGCGTCAAGGCCGTCTACGGCGCCGTCGA
CAAGGCAATCGTGGAAGACAAGCTCTCCATCGCCCTGTCGTTCGAGGGGC
GGCGCAACCCCAACCCGCCTACCCTCAGCAAGATCCAACGGGGCATGTTC
AAAATGCACCAGCAATACAAGATTCCTGTCGTGCTTATCCGTCTTCGAGG
CGTAGAGAAAATCTGGGCTGCTGAGGGTCTACCAACAGGAACAGGTGTGG
TGGAGTGCACCATGCTGCCTCACGCGTACATGTGGCCGACGGCCGAGGCT
TACGAGGAGGGGTTACGCGCCGTGTACGAACGAGGAGAAGACGGTCCGCC
GCCCTCGCCCCTTGCCTCCTCCCCCCCCGTTACAGGCGCCATGGCAAATG
TGCTGGGAATGTTGGAGAAGGAGGCGGTTCGGGTGCTTGAGGGAGGGAGG
GAGGGAGAGAGGGAGGGCGATCTGGCGATTACGCCGGTTGAGTAG back to top
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