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Properties
| Property Name | Value |
|---|
| TranscriptId | 602748 |
| Track | FilteredModels2 |
| ProteinId | 602662 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_25 | supercontig | scaffold_25:290580..292963 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8154 ID=mRNA_8154|Name=jgi.p|Nanoce1779_2|602662|organism=Nannochloropsis oceanica|type=mRNA|length=1042bp
CAGGCCGCGACGCCCATCCTAGCCTAATCCACTCAACTTTAATGCCGGAA
CGCAGACCTCCCCGATGTCGCCTCCCCCTCCTCATTCTGCCCGTCCTCCT
CCCCGTCGTCATTGTCCTACTCAGCCTTTTACCCAGATTCGACGCTTTCC
GCTTGCCTACATACACTTCCTTTTCCTCCAGTGCCAGTACTGCCACGCGC
CAATCCTCTTCCGCCACTGTCATCAGTCCCATCTCTCGAGCCACCTTGGC
AGGACGACAGAGAGGGAAGGCCCTGGCCGTCTTCTCGGGCATTGTCGAGC
AAATGGGGACTGTGAAAGGTGTGCAGCTCAAGGAAATGGTACTTTGGAGT
GGGGATACGGGAAAAGGCATGGAACTGACCATCACAGATGCAGGAACTGT
TCTATCCGACGCCTATGAGGGCTGCAGCATCGCAGTCAATGGCGTTTGTC
TCACCGTCGTCACCTTTACACCGGACACCTTCACAGTAGGCGTTGCGCCC
GAGTCCATCCGCCGGACCAATCTCGGGGCACTGTCAGCGGGCCACAAGGT
CAACCTGGAACGGAGCCTGCCGGCCGACGGCCGGAATTCAGGACACATGG
TGCAAGGGCACGTGGACGAGACCGGGGAAATACTCAGCAAAACCGTGGAG
GGCGACTCGCTTTGGGTCAAGGTCAAAGCCTCGCCCGCGATCTTGCCGTA
CATCGTGGAGAAAGGGTACATCGCGGTGGACGGGACAAGTCTGACGGTCT
GTGAGGTGGATCGGACAGAGGGCTGGTTCACGTTCATGCTCATCGCCTAC
ACCCAGAAGCACATCATTATTCCGCATAAGGGCGTAGGAGACAGGGTAAA
CCTGGAGGTAGATGTGCTCGCTAAGTACGTGGAACGGTCCATGGGCGCCA
CCCTGGAGGCCTTGCGGGTGGAGATCAAGATGTTGCAAGACAAGGTGGCT
AGGCTGGAAGCGGGGGGAGGGTCATCGTAGTGATGAGGAGGAGGGGTGAA
GATTCAAATACAAAAAGACGGGAAAAAGAAACAAATAGAAAG back to topprotein sequence of jgi.p|Nanoce1779_2|602662 >mRNA_8154-protein ID=mRNA_8154-protein|Name=jgi.p|Nanoce1779_2|602662|organism=Nannochloropsis oceanica|type=polypeptide|length=313bp
MPERRPPRCRLPLLILPVLLPVVIVLLSLLPRFDAFRLPTYTSFSSSAST
ATRQSSSATVISPISRATLAGRQRGKALAVFSGIVEQMGTVKGVQLKEMV
LWSGDTGKGMELTITDAGTVLSDAYEGCSIAVNGVCLTVVTFTPDTFTVG
VAPESIRRTNLGALSAGHKVNLERSLPADGRNSGHMVQGHVDETGEILSK
TVEGDSLWVKVKASPAILPYIVEKGYIAVDGTSLTVCEVDRTEGWFTFML
IAYTQKHIIIPHKGVGDRVNLEVDVLAKYVERSMGATLEALRVEIKMLQD
KVARLEAGGGSS* back to topmRNA from alignment at scaffold_25:290580..292963- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8154 ID=mRNA_8154|Name=jgi.p|Nanoce1779_2|602662|organism=Nannochloropsis oceanica|type=mRNA|length=2384bp|location=Sequence derived from alignment at scaffold_25:290580..292963- (Nannochloropsis oceanica)
CAGGCCGCGACGCCCATCCTAGCCTAATCCACTCAACTTTAATGCCGGAA
CGCAGACCTCCCCGATGTCGCCTCCCCCTCCTCATTCTGCCCGTCCTCCT
CCCCGTCGTCATTGTCCTACTCAGCCTTTTACCCAGATTCGACGCTTTCC
GCTTGCCTACATACACTTCCTTTTCCTCCAGTGCCAGTACTGCCACGCGC
CAATCCTCTTCCGCCACTGTCATCAGTCCCATCTCTCGAGCCACCTTGGC
AGGACGACAGAGAGGGAAGGCCCTGGCCGTCTTCTCGGGCATTGTCGAGC
AAATGGGGACTGTGAAAGGTGTGCAGCTCAAGGAAATGGTACTTTGGAGT
GGGGATACGGGAAAAGGTGTGTGGGATGCTGCAGAGAGGGTTGTGTTTGG
GGGTGGGTGGGGTGGGTAGGGAGGAGAGGGTAGGAGGTCGTTTTGATGGG
GAGGTAGGAAGGAGACGAGGCTAACAATAAGTTCCTGATGACATGCAAGT
GCTTTGTGTGTGTGGGAGGAGCTGCTCGATCGAATTATTTCTCTGCACGC
AACCCCCCCGTCTTCTTTCCTCGCACCACCTACCCAAGCATTCCTTCCCT
TCCATCACTGCCACACAACACAGGCATGGAACTGACCATCACAGATGCAG
GAACTGTTCTATCCGACGCCTATGAGGGCTGCAGCATCGCAGTCAATGGC
GTTTGTCTCACCGTCGTCACCTTTACACGTACGTCCTTCCTCTTTTTCCC
TCCTCATATCATTTTATCCTAATCCCCTTCACTCCTTTATCGACTTTTTT
TTTTTTTTTTTTTTTCATTCTATTGGATTCCTTTTCTTTCGTTTCTTTTT
CCATCCATAGGAATCATCTATCCGCCACCCTGAAATTTCCTCCGCTCTTC
CCTTGCATATAGCGGACACCTTCACAGTAGGCGTTGCGCCCGAGTCCATC
CGCCGGACCAATCTCGGGGCACTGTCAGCGGGCCACAAGGTCAACCTGGA
ACGGTAAATAATCTTAAGAATATTAAAATTCAAAAGAGGACATGCTCACC
AAAACCTCGTTCCCTCCCGCCCTCCTTTCCTTTCCCTGGTAGGAGCCTGC
CGGCCGACGGCCGGAATTCAGGACACATGGTGCAAGGGCACGTGGACGAG
ACCGGGGAAATACTCAGCAAAACCGTGGAGGGCGACTCGCTTTGGGTCAA
GGTCAAAGCCTCGCCCGCGATCTTGCCGTACATCGTGGAGAAAGGGTAAG
GAAGGCAAAAGGGAGTCGGAAGGAGGGGAAGCAAGAGTGTGGGGGATGCA
CGGCTTTGATCCCCGTGTCAGGAGCGTGATGGCATTTGCACGAGGTTTGA
GAATGATGAGCCCTGGCTGGTTTACTTCATTCGTTCTGATTAATTGACTT
CCCTTCCTTCCAATTTCGACAGGTACATCGCGGTGGACGGGACAAGTCTG
ACGGTCTGTGAGGTGGATCGGACAGAGGGCTGGTTCACGTTCATGCTCAT
CGCCTACACCCAGAAGCACATCATTATTCCGCATAAGGGCGTAGGAGACA
GGTAGGTTGAGTCTTTCCACAACCCCCATCGATCTCGAAAGTCGCTTGCT
TCTCATTTAAGCTATATTATCTTCTAGCTTTCATATTTTTCTAAATCAAC
GCGTCGGTGGCTTTTTGAGCTTTTCCCCCCTATTTCCTTATGCTGCGTGC
CGTGACACACGAAAAGTGACACAAATTATAATCCATTAAAATAGGGTAAA
CCTGGAGGTAGATGTGCTCGCTAAGTACGTGGAACGGTCCATGGGCGCCA
CCCTGGAGGCCTTGCGGGTGGAGATCAAGATGTTGCAAGACAAGGTGTGT
TGGTGGGGATGGGGGGCAGGTGTGAGAGACTTGATAATGATAATTCAAAG
GAGCCATGGCCAGCCAACAGCGACTGGCCGCTGGCGTATTTCATGGCATT
CTAGAGATGCCATCGTTGTGTTGATGCGAAGGTTGGAGAAACGGGTCCAG
AATGAAAATTTTGAGGCGTGACATGGAACAATTTGTTCGTTTTTAACGAG
TAACATTCCTAGACTCGGAGTAAGGGGCCTCATCTCAGGCTGTGGCTTAT
TCTGTATATCACTTCAGTACTTCACCCACCTCATGTGTAATTCAAGCACG
CTTATCATAAGTTATCTCTGGTTTTGTACCTGGTCACAACACAACTCATC
TTCGTCCTCACACTCACAGTCTCATTCGATCCATCCAATATCACTTTCCC
CCATTTACATCTCAAACTTTCTCTTTCGCCCTCAAGGTGGCTAGGCTGGA
AGCGGGGGGAGGGTCATCGTAGTGATGAGGAGGAGGGGTGAAGATTCAAA
TACAAAAAGACGGGAAAAAGAAACAAATAGAAAG back to topCoding sequence (CDS) from alignment at scaffold_25:290580..292963- >mRNA_8154 ID=mRNA_8154|Name=jgi.p|Nanoce1779_2|602662|organism=Nannochloropsis oceanica|type=CDS|length=6573bp|location=Sequence derived from alignment at scaffold_25:290580..292963- (Nannochloropsis oceanica)
GTGGCTAGGCTGGAAGCGGGGGGAGGGTCATCGTAGGGTAAACCTGGAGG
TAGATGTGCTCGCTAAGTACGTGGAACGGTCCATGGGCGCCACCCTGGAG
GCCTTGCGGGTGGAGATCAAGATGTTGCAAGACAAGGTACATCGCGGTGG
ACGGGACAAGTCTGACGGTCTGTGAGGTGGATCGGACAGAGGGCTGGTTC
ACGTTCATGCTCATCGCCTACACCCAGAAGCACATCATTATTCCGCATAA
GGGCGTAGGAGACAGGAGCCTGCCGGCCGACGGCCGGAATTCAGGACACA
TGGTGCAAGGGCACGTGGACGAGACCGGGGAAATACTCAGCAAAACCGTG
GAGGGCGACTCGCTTTGGGTCAAGGTCAAAGCCTCGCCCGCGATCTTGCC
GTACATCGTGGAGAAAGGCGGACACCTTCACAGTAGGCGTTGCGCCCGAG
TCCATCCGCCGGACCAATCTCGGGGCACTGTCAGCGGGCCACAAGGTCAA
CCTGGAACGGCATGGAACTGACCATCACAGATGCAGGAACTGTTCTATCC
GACGCCTATGAGGGCTGCAGCATCGCAGTCAATGGCGTTTGTCTCACCGT
CGTCACCTTTACACATGCCGGAACGCAGACCTCCCCGATGTCGCCTCCCC
CTCCTCATTCTGCCCGTCCTCCTCCCCGTCGTCATTGTCCTACTCAGCCT
TTTACCCAGATTCGACGCTTTCCGCTTGCCTACATACACTTCCTTTTCCT
CCAGTGCCAGTACTGCCACGCGCCAATCCTCTTCCGCCACTGTCATCAGT
CCCATCTCTCGAGCCACCTTGGCAGGACGACAGAGAGGGAAGGCCCTGGC
CGTCTTCTCGGGCATTGTCGAGCAAATGGGGACTGTGAAAGGTGTGCAGC
TCAAGGAAATGGTACTTTGGAGTGGGGATACGGGAAAAGGTGGCTAGGCT
GGAAGCGGGGGGAGGGTCATCGTAGGGTAAACCTGGAGGTAGATGTGCTC
GCTAAGTACGTGGAACGGTCCATGGGCGCCACCCTGGAGGCCTTGCGGGT
GGAGATCAAGATGTTGCAAGACAAGGTACATCGCGGTGGACGGGACAAGT
CTGACGGTCTGTGAGGTGGATCGGACAGAGGGCTGGTTCACGTTCATGCT
CATCGCCTACACCCAGAAGCACATCATTATTCCGCATAAGGGCGTAGGAG
ACAGGAGCCTGCCGGCCGACGGCCGGAATTCAGGACACATGGTGCAAGGG
CACGTGGACGAGACCGGGGAAATACTCAGCAAAACCGTGGAGGGCGACTC
GCTTTGGGTCAAGGTCAAAGCCTCGCCCGCGATCTTGCCGTACATCGTGG
AGAAAGGCGGACACCTTCACAGTAGGCGTTGCGCCCGAGTCCATCCGCCG
GACCAATCTCGGGGCACTGTCAGCGGGCCACAAGGTCAACCTGGAACGGC
ATGGAACTGACCATCACAGATGCAGGAACTGTTCTATCCGACGCCTATGA
GGGCTGCAGCATCGCAGTCAATGGCGTTTGTCTCACCGTCGTCACCTTTA
CACATGCCGGAACGCAGACCTCCCCGATGTCGCCTCCCCCTCCTCATTCT
GCCCGTCCTCCTCCCCGTCGTCATTGTCCTACTCAGCCTTTTACCCAGAT
TCGACGCTTTCCGCTTGCCTACATACACTTCCTTTTCCTCCAGTGCCAGT
ACTGCCACGCGCCAATCCTCTTCCGCCACTGTCATCAGTCCCATCTCTCG
AGCCACCTTGGCAGGACGACAGAGAGGGAAGGCCCTGGCCGTCTTCTCGG
GCATTGTCGAGCAAATGGGGACTGTGAAAGGTGTGCAGCTCAAGGAAATG
GTACTTTGGAGTGGGGATACGGGAAAAGGTGGCTAGGCTGGAAGCGGGGG
GAGGGTCATCGTAGGGTAAACCTGGAGGTAGATGTGCTCGCTAAGTACGT
GGAACGGTCCATGGGCGCCACCCTGGAGGCCTTGCGGGTGGAGATCAAGA
TGTTGCAAGACAAGGTACATCGCGGTGGACGGGACAAGTCTGACGGTCTG
TGAGGTGGATCGGACAGAGGGCTGGTTCACGTTCATGCTCATCGCCTACA
CCCAGAAGCACATCATTATTCCGCATAAGGGCGTAGGAGACAGGAGCCTG
CCGGCCGACGGCCGGAATTCAGGACACATGGTGCAAGGGCACGTGGACGA
GACCGGGGAAATACTCAGCAAAACCGTGGAGGGCGACTCGCTTTGGGTCA
AGGTCAAAGCCTCGCCCGCGATCTTGCCGTACATCGTGGAGAAAGGCGGA
CACCTTCACAGTAGGCGTTGCGCCCGAGTCCATCCGCCGGACCAATCTCG
GGGCACTGTCAGCGGGCCACAAGGTCAACCTGGAACGGCATGGAACTGAC
CATCACAGATGCAGGAACTGTTCTATCCGACGCCTATGAGGGCTGCAGCA
TCGCAGTCAATGGCGTTTGTCTCACCGTCGTCACCTTTACACATGCCGGA
ACGCAGACCTCCCCGATGTCGCCTCCCCCTCCTCATTCTGCCCGTCCTCC
TCCCCGTCGTCATTGTCCTACTCAGCCTTTTACCCAGATTCGACGCTTTC
CGCTTGCCTACATACACTTCCTTTTCCTCCAGTGCCAGTACTGCCACGCG
CCAATCCTCTTCCGCCACTGTCATCAGTCCCATCTCTCGAGCCACCTTGG
CAGGACGACAGAGAGGGAAGGCCCTGGCCGTCTTCTCGGGCATTGTCGAG
CAAATGGGGACTGTGAAAGGTGTGCAGCTCAAGGAAATGGTACTTTGGAG
TGGGGATACGGGAAAAGGTGGCTAGGCTGGAAGCGGGGGGAGGGTCATCG
TAGGGTAAACCTGGAGGTAGATGTGCTCGCTAAGTACGTGGAACGGTCCA
TGGGCGCCACCCTGGAGGCCTTGCGGGTGGAGATCAAGATGTTGCAAGAC
AAGGTACATCGCGGTGGACGGGACAAGTCTGACGGTCTGTGAGGTGGATC
GGACAGAGGGCTGGTTCACGTTCATGCTCATCGCCTACACCCAGAAGCAC
ATCATTATTCCGCATAAGGGCGTAGGAGACAGGAGCCTGCCGGCCGACGG
CCGGAATTCAGGACACATGGTGCAAGGGCACGTGGACGAGACCGGGGAAA
TACTCAGCAAAACCGTGGAGGGCGACTCGCTTTGGGTCAAGGTCAAAGCC
TCGCCCGCGATCTTGCCGTACATCGTGGAGAAAGGCGGACACCTTCACAG
TAGGCGTTGCGCCCGAGTCCATCCGCCGGACCAATCTCGGGGCACTGTCA
GCGGGCCACAAGGTCAACCTGGAACGGCATGGAACTGACCATCACAGATG
CAGGAACTGTTCTATCCGACGCCTATGAGGGCTGCAGCATCGCAGTCAAT
GGCGTTTGTCTCACCGTCGTCACCTTTACACATGCCGGAACGCAGACCTC
CCCGATGTCGCCTCCCCCTCCTCATTCTGCCCGTCCTCCTCCCCGTCGTC
ATTGTCCTACTCAGCCTTTTACCCAGATTCGACGCTTTCCGCTTGCCTAC
ATACACTTCCTTTTCCTCCAGTGCCAGTACTGCCACGCGCCAATCCTCTT
CCGCCACTGTCATCAGTCCCATCTCTCGAGCCACCTTGGCAGGACGACAG
AGAGGGAAGGCCCTGGCCGTCTTCTCGGGCATTGTCGAGCAAATGGGGAC
TGTGAAAGGTGTGCAGCTCAAGGAAATGGTACTTTGGAGTGGGGATACGG
GAAAAGGTGGCTAGGCTGGAAGCGGGGGGAGGGTCATCGTAGGGTAAACC
TGGAGGTAGATGTGCTCGCTAAGTACGTGGAACGGTCCATGGGCGCCACC
CTGGAGGCCTTGCGGGTGGAGATCAAGATGTTGCAAGACAAGGTACATCG
CGGTGGACGGGACAAGTCTGACGGTCTGTGAGGTGGATCGGACAGAGGGC
TGGTTCACGTTCATGCTCATCGCCTACACCCAGAAGCACATCATTATTCC
GCATAAGGGCGTAGGAGACAGGAGCCTGCCGGCCGACGGCCGGAATTCAG
GACACATGGTGCAAGGGCACGTGGACGAGACCGGGGAAATACTCAGCAAA
ACCGTGGAGGGCGACTCGCTTTGGGTCAAGGTCAAAGCCTCGCCCGCGAT
CTTGCCGTACATCGTGGAGAAAGGCGGACACCTTCACAGTAGGCGTTGCG
CCCGAGTCCATCCGCCGGACCAATCTCGGGGCACTGTCAGCGGGCCACAA
GGTCAACCTGGAACGGCATGGAACTGACCATCACAGATGCAGGAACTGTT
CTATCCGACGCCTATGAGGGCTGCAGCATCGCAGTCAATGGCGTTTGTCT
CACCGTCGTCACCTTTACACATGCCGGAACGCAGACCTCCCCGATGTCGC
CTCCCCCTCCTCATTCTGCCCGTCCTCCTCCCCGTCGTCATTGTCCTACT
CAGCCTTTTACCCAGATTCGACGCTTTCCGCTTGCCTACATACACTTCCT
TTTCCTCCAGTGCCAGTACTGCCACGCGCCAATCCTCTTCCGCCACTGTC
ATCAGTCCCATCTCTCGAGCCACCTTGGCAGGACGACAGAGAGGGAAGGC
CCTGGCCGTCTTCTCGGGCATTGTCGAGCAAATGGGGACTGTGAAAGGTG
TGCAGCTCAAGGAAATGGTACTTTGGAGTGGGGATACGGGAAAAGGTGGC
TAGGCTGGAAGCGGGGGGAGGGTCATCGTAGGGTAAACCTGGAGGTAGAT
GTGCTCGCTAAGTACGTGGAACGGTCCATGGGCGCCACCCTGGAGGCCTT
GCGGGTGGAGATCAAGATGTTGCAAGACAAGGTACATCGCGGTGGACGGG
ACAAGTCTGACGGTCTGTGAGGTGGATCGGACAGAGGGCTGGTTCACGTT
CATGCTCATCGCCTACACCCAGAAGCACATCATTATTCCGCATAAGGGCG
TAGGAGACAGGAGCCTGCCGGCCGACGGCCGGAATTCAGGACACATGGTG
CAAGGGCACGTGGACGAGACCGGGGAAATACTCAGCAAAACCGTGGAGGG
CGACTCGCTTTGGGTCAAGGTCAAAGCCTCGCCCGCGATCTTGCCGTACA
TCGTGGAGAAAGGCGGACACCTTCACAGTAGGCGTTGCGCCCGAGTCCAT
CCGCCGGACCAATCTCGGGGCACTGTCAGCGGGCCACAAGGTCAACCTGG
AACGGCATGGAACTGACCATCACAGATGCAGGAACTGTTCTATCCGACGC
CTATGAGGGCTGCAGCATCGCAGTCAATGGCGTTTGTCTCACCGTCGTCA
CCTTTACACATGCCGGAACGCAGACCTCCCCGATGTCGCCTCCCCCTCCT
CATTCTGCCCGTCCTCCTCCCCGTCGTCATTGTCCTACTCAGCCTTTTAC
CCAGATTCGACGCTTTCCGCTTGCCTACATACACTTCCTTTTCCTCCAGT
GCCAGTACTGCCACGCGCCAATCCTCTTCCGCCACTGTCATCAGTCCCAT
CTCTCGAGCCACCTTGGCAGGACGACAGAGAGGGAAGGCCCTGGCCGTCT
TCTCGGGCATTGTCGAGCAAATGGGGACTGTGAAAGGTGTGCAGCTCAAG
GAAATGGTACTTTGGAGTGGGGATACGGGAAAAGGTGGCTAGGCTGGAAG
CGGGGGGAGGGTCATCGTAGGGTAAACCTGGAGGTAGATGTGCTCGCTAA
GTACGTGGAACGGTCCATGGGCGCCACCCTGGAGGCCTTGCGGGTGGAGA
TCAAGATGTTGCAAGACAAGGTACATCGCGGTGGACGGGACAAGTCTGAC
GGTCTGTGAGGTGGATCGGACAGAGGGCTGGTTCACGTTCATGCTCATCG
CCTACACCCAGAAGCACATCATTATTCCGCATAAGGGCGTAGGAGACAGG
AGCCTGCCGGCCGACGGCCGGAATTCAGGACACATGGTGCAAGGGCACGT
GGACGAGACCGGGGAAATACTCAGCAAAACCGTGGAGGGCGACTCGCTTT
GGGTCAAGGTCAAAGCCTCGCCCGCGATCTTGCCGTACATCGTGGAGAAA
GGCGGACACCTTCACAGTAGGCGTTGCGCCCGAGTCCATCCGCCGGACCA
ATCTCGGGGCACTGTCAGCGGGCCACAAGGTCAACCTGGAACGGCATGGA
ACTGACCATCACAGATGCAGGAACTGTTCTATCCGACGCCTATGAGGGCT
GCAGCATCGCAGTCAATGGCGTTTGTCTCACCGTCGTCACCTTTACACAT
GCCGGAACGCAGACCTCCCCGATGTCGCCTCCCCCTCCTCATTCTGCCCG
TCCTCCTCCCCGTCGTCATTGTCCTACTCAGCCTTTTACCCAGATTCGAC
GCTTTCCGCTTGCCTACATACACTTCCTTTTCCTCCAGTGCCAGTACTGC
CACGCGCCAATCCTCTTCCGCCACTGTCATCAGTCCCATCTCTCGAGCCA
CCTTGGCAGGACGACAGAGAGGGAAGGCCCTGGCCGTCTTCTCGGGCATT
GTCGAGCAAATGGGGACTGTGAAAGGTGTGCAGCTCAAGGAAATGGTACT
TTGGAGTGGGGATACGGGAAAAG back to top
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