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Properties
| Property Name | Value |
|---|
| TranscriptId | 602739 |
| Track | FilteredModels2 |
| ProteinId | 602653 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_25 | supercontig | scaffold_25:288297..289985 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8152 ID=mRNA_8152|Name=jgi.p|Nanoce1779_2|602653|organism=Nannochloropsis oceanica|type=mRNA|length=1526bp
CCGCATACCATCTGCACTACCACATCCGACAATCCTTCCTCCTTCGCTCC
TTCCCCCCCTCCCTCCCTCCCTCCCTGCATACCCAAGGCAATGTTGGCGA
GGAACGCTGCTGCCATTTGCCTTACTGCTGGTCGATCATCTAGCAGCGCT
GCCACCGCTGCATCTGTTGCCAAGGTCGCGCGGGAGGGATGGAGAAGCAG
CTTACACCCTGCTTTGTGCGCGCAGACATTGCTAAGCCCGGAAAAGGCAA
TGACGACCGAGGAAGGGGAGGAGAACGAGGAAGAAGACGAGGAAGGGAAG
GACGAAGGGACACCAGAAAATTTGGCCAGGAGATGATCCAGCAATGCGGG
GGTCGGGAAGGTGGGGCGGAGGAAGAGGGGCCGAAGGAGGGAGAGGGAAA
AGAACTCGGCCTTCACAGGCCAGGGGGGAAGGAGAGTGCGGAGGAGGAGG
GAGGCGAGGGAGTGAGGAAGGGGGGTGAGAGGTTGGAGGATTATGGCTTC
GGTAGCTTCGAGCAAGGCGATGTCGTCGGGGGAGAAGAGGGGCACGTCTT
CCTTCCCTTCCTCGGTAACAGCAGCAGTGGAGAGTGTCTTGAGCTTGGTG
ATGACAGTGCTGACGGTTTGCTTCAAAACAGCCGGAGGGTCGATGGATAA
AAGAGGTTTGTCGTGGCGGGCGAGGACGGATTCAACGGGCGCTGAGATAT
CTTGTTGCTTGCCAGTGGTCACCGGGACAGCAGCAGTGCCTCTGCTGCTG
CTGCTGCTGCTGCTGCTGCTGCTGCTCGTGGTGCTGGTTGTTGTCGTCGT
TGTAGAAGCTGCGCGCATATTCGCCCAAGGATTGTTTAGTGGTACTGCCG
GTAAGGGCGCTTGCGGCGACATGTGGTGCGGGGGGACAAGTGGAGGGGGG
TTGTTGATGTGATGATGCCCCGCCTGCCCCCCCCCCGCTCCCTCCCTAGC
TCCTCTCCCTCCTTCGTAAGACTCGAAATGAAAGCCGGGGACGGCGGGGC
GCATGGCGCCCTGCATTTGTTCGATAGCGGGACGAAGGAGGGCGCCGAGG
GGGGAGGAAAAAACTTGTTCGGGTAGGGCGAGGATGTGGGCTGGAATCCC
GTCACCCAGGAGGAAAAGCGCGGCTTCGTTGCTGAAGTTATTGCAGTTCC
AGCTCATCAGATCATACGTCTCCGCCGTGAACCGTGGGCTGACCTCCTGC
AAAAACTCATTGAAAAGCTCCTCGCCCACCTCTGTCTCTCCCAATTCCAG
AATCTGAAAAGGTTGCATGTGATATGAGGCCATGAACTCCTCGTGGGGCA
CTGACACAATCCCTCCGCCAAAAAAGTGCTCCTTGCCATATACCACGATT
CCGGTGTGGTAGATGGCTTCGATCTCCATACCCAAGAGTGTGGGGCCGAG
CTGCCGAGCCATGCCTTGCGACAAGTCATATACAGCAAGCTGCACTTTGA
ATCGAGGGGCTTCCTCTTCCCCTCCTCCACCGGAAATTGAGGCGGACATG
GATGTGGAATGACTGTGAATCGCTGT back to topprotein sequence of jgi.p|Nanoce1779_2|602653 >mRNA_8152-protein ID=mRNA_8152-protein|Name=jgi.p|Nanoce1779_2|602653|organism=Nannochloropsis oceanica|type=polypeptide|length=154bp
MEKQLTPCFVRADIAKPGKGNDDRGRGGERGRRRGREGRRDTRKFGQEMI
QQCGGREGGAEEEGPKEGEGKELGLHRPGGKESAEEEGGEGVRKGGERLE
DYGFGSFEQGDVVGGEEGHVFLPFLGNSSSGECLELGDDSADGLLQNSRR
VDG* back to topmRNA from alignment at scaffold_25:288297..289985+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8152 ID=mRNA_8152|Name=jgi.p|Nanoce1779_2|602653|organism=Nannochloropsis oceanica|type=mRNA|length=1689bp|location=Sequence derived from alignment at scaffold_25:288297..289985+ (Nannochloropsis oceanica)
CCGCATACCATCTGCACTACCACATCCGACAATCCTTCCTCCTTCGCTCC
TTCCCCCCCTCCCTCCCTCCCTCCCTGCATACCCAAGGCAATGTTGGCGA
GGAACGCTGCTGCCATTTGCCTTACTGCTGGTCGATCATCTAGCAGCGCT
GCCACCGCTGCATCTGTTGCCAAGGTCGCGCGGGAGGGATGGAGAAGCAG
CTTACACCCTGCTTTGTGCGCGCAGACATTGCTAAGCCCGGAAAAGGCAA
TGACGACCGAGGAAGGGGAGGAGAACGAGGAAGAAGACGAGGAAGGGAAG
GACGAAGGGACACCAGAAAATTTGGCCAGGAGATGATCCAGCAATGCGGG
GGTCGGGAAGGTGGGGCGGAGGAAGAGGGGCCGAAGGAGGGAGAGGGAAA
AGAACTCGGCCTTCACAGGCCAGGGGGGAAGGAGAGTGCGGAGGAGGAGG
GAGGCGAGGGAGTGAGGAAGGGGGGTGAGAGGTTGGAGGATTATGGCTTC
GGTAGCTTCGAGCAAGGCGATGTCGTCGGGGGAGAAGAGGGGCACGTCTT
CCTTCCCTTCCTCGGTAACAGCAGCAGTGGAGAGTGTCTTGAGCTTGGTG
ATGACAGTGCTGACGGTTTGCTTCAAAACAGCCGGAGGGTCGATGGATAA
AAGAGGTTTGTCGTGGCGGGCGAGGACGGATTCAACGGGCGCTGAGATAT
CTTGTTGCTTGCCAGTGGTCACCGGGACAGCAGCAGTGCCTCTGCTGCTG
CTGCTGCTGCTGCTGCTGCTGCTGCTCGTGGTGCTGGTTGTTGTCGTCGT
TGTAGAAGCTGCGCGCATATTCGCCCAAGGATTGTTTAGTGGTACTGCCG
GTAAGGGCGCTTGCGGCGACATGTGGTGCGGGGGGACAAGTGGAGGGGGG
TTGTTGATGTGATGATGCCCCGCCTGCCCCCCCCCCGCTCCCTCCCTAGC
TCCTCTCCCTCCTTCGTAAGACTCGAAATGAAAGCCGGGGACGGCGGGGC
GCATGGCGCCCTGCATTTGTTCGATAGCGGGACGAAGGAGGGCGCCGAGG
GGGGAGGAAAAAACTTGTTCGGGTAGGGCGAGGATGTGGGCTGGAATCCC
GTCACCCAGGAGGAAAAGCGCGGCTTCGTTGCTGAAGTTATTGCAGTTCC
AGCTCATCAGATCTTGGGGAGGGAGGGCGAGGGGGAAGAAAGGAAAGAAG
GAATGGTCAGGTTAATGGAATGTACATGAAAATCAGTAAAGACGATGACT
TGCCATAAACAATCTACCACTATGGGCGACACTCGTCCTCCTTGCCTCCC
ACCTTCACTTTCTCTTTTTACTCACCATACGTCTCCGCCGTGAACCGTGG
GCTGACCTCCTGCAAAAACTCATTGAAAAGCTCCTCGCCCACCTCTGTCT
CTCCCAATTCCAGAATCTGAAAAGGTTGCATGTGATATGAGGCCATGAAC
TCCTCGTGGGGCACTGACACAATCCCTCCGCCAAAAAAGTGCTCCTTGCC
ATATACCACGATTCCGGTGTGGTAGATGGCTTCGATCTCCATACCCAAGA
GTGTGGGGCCGAGCTGCCGAGCCATGCCTTGCGACAAGTCATATACAGCA
AGCTGCACTTTGAATCGAGGGGCTTCCTCTTCCCCTCCTCCACCGGAAAT
TGAGGCGGACATGGATGTGGAATGACTGTGAATCGCTGT back to topCoding sequence (CDS) from alignment at scaffold_25:288297..289985+ >mRNA_8152 ID=mRNA_8152|Name=jgi.p|Nanoce1779_2|602653|organism=Nannochloropsis oceanica|type=CDS|length=462bp|location=Sequence derived from alignment at scaffold_25:288297..289985+ (Nannochloropsis oceanica)
ATGGAGAAGCAGCTTACACCCTGCTTTGTGCGCGCAGACATTGCTAAGCC
CGGAAAAGGCAATGACGACCGAGGAAGGGGAGGAGAACGAGGAAGAAGAC
GAGGAAGGGAAGGACGAAGGGACACCAGAAAATTTGGCCAGGAGATGATC
CAGCAATGCGGGGGTCGGGAAGGTGGGGCGGAGGAAGAGGGGCCGAAGGA
GGGAGAGGGAAAAGAACTCGGCCTTCACAGGCCAGGGGGGAAGGAGAGTG
CGGAGGAGGAGGGAGGCGAGGGAGTGAGGAAGGGGGGTGAGAGGTTGGAG
GATTATGGCTTCGGTAGCTTCGAGCAAGGCGATGTCGTCGGGGGAGAAGA
GGGGCACGTCTTCCTTCCCTTCCTCGGTAACAGCAGCAGTGGAGAGTGTC
TTGAGCTTGGTGATGACAGTGCTGACGGTTTGCTTCAAAACAGCCGGAGG
GTCGATGGATAA back to top
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