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Properties
| Property Name | Value |
|---|
| TranscriptId | 532676 |
| Track | FilteredModels2 |
| ProteinId | 532590 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_25 | supercontig | scaffold_25:283324..285201 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8150 ID=mRNA_8150|Name=jgi.p|Nanoce1779_2|532590|organism=Nannochloropsis oceanica|type=mRNA|length=1644bp
ATGGCACCACGGGCACTGTGGCTGCTGGAGACAATTGAGGAGGGAGAGGA
GGAGGAAGGGAATGGGAATGGCCTTAGCACAAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGAAGAGAGAGAAAGAAACCGACTTCCGCAGATTAC
CATGGAGTCATTTATTTATTGGTGCGGGGGGGATTGGTCGACGAGGGGCT
TGCCCTGCTTCGGCGTCTGGTAGCCCAGGGGGATGAGAGGCCCTTGCGCT
CATCTTATCGAGTCCTTATATCCGGGTACTGTCGGCTGGGACGGAGGAAG
AGTGCTCTGTACCTCCTGCAGGACCTGAGACAATATGGCCTGGCTCTTCC
TTTATCGTCGTATAGCCGGGTGATGAAGGGCCTGGGGGAGGGCGGGAGGG
AGGACGAGGCGTTGGAGTTGTTAAAGAACATGAGGGCCCGAGGCCTTAAG
CCGGACGTGTGGTGCAGTAACTACGCTCTCATGGCATGCGCGAGGAGTGA
GGGGAAGGAGGGAGGGAGGGTCGTCTGGGAGGTGTTGGATGAGATGGAGG
AGGAGGAGAGGAGTGCCTTTACCTATTCCTTGGTCATCGAGGGATTGGGA
AAGGCGGGGCGGTGGGAGGAGGCCAGGGGGGTTTTGTTTGAGATGAAGAA
AAAGGGGATTCAGCCTTCTGTGGGGTGTTACAGCTCGGCTATAAACGCAT
TGGGGAAGGCAGGGAGGGCGATGGAGGCCTTGGAATTGCTGGACAAGATG
AAGGAGGAGGAGGGGGAGGGAGGGAGGGAGGTAGGGGTGAAGCCCAATGC
GGTGGTGTACACTGCGGCGATCGATGCGTGTGCAAGGAGTGGAATGGTAG
AGGAGGCGGTGGGCCTGTTGAGAGAGATGGAGGGAGGGAGGGAGGGAGGG
GGCCTGCCTCCGAACCCTGTGGCGTATGGATGCGCGATCAATGCTTGCGC
AAAGGCCAGGGAGGGACGGAAGGCGGTTATGCTGTTGAGGGAGATGCAGA
AGAAGGGCTTGGAAGTGACGGAGATTCACTACGGCGCCGCTATCAACGGC
CTAAACCTAAGCGAGGAGGACGATGAACTTTTGTTGCATCTCTACGAGGA
GGCGAGAGGGAGGGGGGTGACGATGGTGGTGGGCATGTGGGCGGCTGCTA
TCAAAGCAGGGGATCGGATGGGGGCCTATGAAAGAGTACTGAAGGTGGGA
GGAGAGATGATGGAGTGTGGACAGAGTCCGAACAAGAAGGCCTTGAAATT
GTTGATGCTAGCGGCGGAGAGGGGTGGGAGGTATGAGGAGGGGGTGGGAC
TGTTTGAGAGGGTCGTGGGAGAAGGAGGGATGGAGCCGTGTGAGGCGGCG
AATAAGTATGCCTTGGTGTGTGCAGAGAAGGTGGGGAATACGATGACGAT
GTTGGGATGCATGAAGAGGGCTGAGAGGATGGGTTGGAGAGGAGAGGGGA
AGGGGGTGGAAGAGTGGATGTGCCGCTTGGCGGCACGGGCGTTAAATCGG
GTGGAAATAGAGAAGGAGTGCATAGGAGGGTGGGATGAAAAGGAGAGGTG
GATGGCAGTAGCGGAATTGGAGGCGATGGTGGGGTTGTGGAGGAGGAGAG
CGGAAGAGGAGACCTGGCGGAAGAAAAACGGGGGAGGGGTGTGA back to topprotein sequence of jgi.p|Nanoce1779_2|532590 >mRNA_8150-protein ID=mRNA_8150-protein|Name=jgi.p|Nanoce1779_2|532590|organism=Nannochloropsis oceanica|type=polypeptide|length=548bp
MAPRALWLLETIEEGEEEEGNGNGLSTSSSSSSSSSSSRRERKKPTSADY
HGVIYLLVRGGLVDEGLALLRRLVAQGDERPLRSSYRVLISGYCRLGRRK
SALYLLQDLRQYGLALPLSSYSRVMKGLGEGGREDEALELLKNMRARGLK
PDVWCSNYALMACARSEGKEGGRVVWEVLDEMEEEERSAFTYSLVIEGLG
KAGRWEEARGVLFEMKKKGIQPSVGCYSSAINALGKAGRAMEALELLDKM
KEEEGEGGREVGVKPNAVVYTAAIDACARSGMVEEAVGLLREMEGGREGG
GLPPNPVAYGCAINACAKAREGRKAVMLLREMQKKGLEVTEIHYGAAING
LNLSEEDDELLLHLYEEARGRGVTMVVGMWAAAIKAGDRMGAYERVLKVG
GEMMECGQSPNKKALKLLMLAAERGGRYEEGVGLFERVVGEGGMEPCEAA
NKYALVCAEKVGNTMTMLGCMKRAERMGWRGEGKGVEEWMCRLAARALNR
VEIEKECIGGWDEKERWMAVAELEAMVGLWRRRAEEETWRKKNGGGV* back to topmRNA from alignment at scaffold_25:283324..285201- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8150 ID=mRNA_8150|Name=jgi.p|Nanoce1779_2|532590|organism=Nannochloropsis oceanica|type=mRNA|length=1878bp|location=Sequence derived from alignment at scaffold_25:283324..285201- (Nannochloropsis oceanica)
ATGGCACCACGGGCACTGTGGCTGCTGGAGACAATTGAGGAGGGAGAGGA
GGAGGAAGGGAATGGGAATGGCCTTAGCACAAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGAAGAGAGAGAAAGAAACCGACTTCCGCAGATTAC
CATGGAGTCATTTATTTATTGGTGCGGGGGGGATTGGTCGACGAGGGGCT
TGCCCTGCTTCGGCGTCTGGTAGCCCAGGGGGATGAGAGGCCCTTGCGCT
CATCTTATCGAGTCCTTATATCCGGGTACTGTCGGCTGGGACGGAGGAAG
AGTGCTCTGTACCTCCTGCAGGACCTGAGACAGTGGAGGAGTAAAAGAGG
GGCAGGAGGGGAGGATGAGTATGAGGAGCAAGAGGAGGAAGAGAGGGAGT
GCGTCAGGTTGATTGAGGGAATTGGGCGGGCAGAAGGGGAGGGGGAGAAG
GAGGAAGGACAGGAGGCCCAGCAGCAGCTGTTGCAGCCACGCCACGTGAA
GGAGGAGGGGGAGAAAGGGGGGGAGAGGCTGTCGACCTCACGACTGCTGC
GGTCCTTGACGGATAGATATGGCCTGGCTCTTCCTTTATCGTCGTATAGC
CGGGTGATGAAGGGCCTGGGGGAGGGCGGGAGGGAGGACGAGGCGTTGGA
GTTGTTAAAGAACATGAGGGCCCGAGGCCTTAAGCCGGACGTGTGGTGCA
GTAACTACGCTCTCATGGCATGCGCGAGGAGTGAGGGGAAGGAGGGAGGG
AGGGTCGTCTGGGAGGTGTTGGATGAGATGGAGGAGGAGGAGAGGAGTGC
CTTTACCTATTCCTTGGTCATCGAGGGATTGGGAAAGGCGGGGCGGTGGG
AGGAGGCCAGGGGGGTTTTGTTTGAGATGAAGAAAAAGGGGATTCAGCCT
TCTGTGGGGTGTTACAGCTCGGCTATAAACGCATTGGGGAAGGCAGGGAG
GGCGATGGAGGCCTTGGAATTGCTGGACAAGATGAAGGAGGAGGAGGGGG
AGGGAGGGAGGGAGGTAGGGGTGAAGCCCAATGCGGTGGTGTACACTGCG
GCGATCGATGCGTGTGCAAGGAGTGGAATGGTAGAGGAGGCGGTGGGCCT
GTTGAGAGAGATGGAGGGAGGGAGGGAGGGAGGGGGCCTGCCTCCGAACC
CTGTGGCGTATGGATGCGCGATCAATGCTTGCGCAAAGGCCAGGGAGGGA
CGGAAGGCGGTTATGCTGTTGAGGGAGATGCAGAAGAAGGGCTTGGAAGT
GACGGAGATTCACTACGGCGCCGCTATCAACGGCCTAAACCTAAGCGAGG
AGGACGATGAACTTTTGTTGCATCTCTACGAGGAGGCGAGAGGGAGGGGG
GTGACGATGGTGGTGGGCATGTGGGCGGCTGCTATCAAAGCAGGGGATCG
GATGGGGGCCTATGAAAGAGTACTGAAGGTGGGAGGAGAGATGATGGAGT
GTGGACAGAGTCCGAACAAGAAGGCCTTGAAATTGTTGATGCTAGCGGCG
GAGAGGGGTGGGAGGTATGAGGAGGGGGTGGGACTGTTTGAGAGGGTCGT
GGGAGAAGGAGGGATGGAGCCGTGTGAGGCGGCGAATAAGTATGCCTTGG
TGTGTGCAGAGAAGGTGGGGAATACGATGACGATGTTGGGATGCATGAAG
AGGGCTGAGAGGATGGGTTGGAGAGGAGAGGGGAAGGGGGTGGAAGAGTG
GATGTGCCGCTTGGCGGCACGGGCGTTAAATCGGGTGGAAATAGAGAAGG
AGTGCATAGGAGGGTGGGATGAAAAGGAGAGGTGGATGGCAGTAGCGGAA
TTGGAGGCGATGGTGGGGTTGTGGAGGAGGAGAGCGGAAGAGGAGACCTG
GCGGAAGAAAAACGGGGGAGGGGTGTGA back to topCoding sequence (CDS) from alignment at scaffold_25:283324..285201- >mRNA_8150 ID=mRNA_8150|Name=jgi.p|Nanoce1779_2|532590|organism=Nannochloropsis oceanica|type=CDS|length=3288bp|location=Sequence derived from alignment at scaffold_25:283324..285201- (Nannochloropsis oceanica)
ATATGGCCTGGCTCTTCCTTTATCGTCGTATAGCCGGGTGATGAAGGGCC
TGGGGGAGGGCGGGAGGGAGGACGAGGCGTTGGAGTTGTTAAAGAACATG
AGGGCCCGAGGCCTTAAGCCGGACGTGTGGTGCAGTAACTACGCTCTCAT
GGCATGCGCGAGGAGTGAGGGGAAGGAGGGAGGGAGGGTCGTCTGGGAGG
TGTTGGATGAGATGGAGGAGGAGGAGAGGAGTGCCTTTACCTATTCCTTG
GTCATCGAGGGATTGGGAAAGGCGGGGCGGTGGGAGGAGGCCAGGGGGGT
TTTGTTTGAGATGAAGAAAAAGGGGATTCAGCCTTCTGTGGGGTGTTACA
GCTCGGCTATAAACGCATTGGGGAAGGCAGGGAGGGCGATGGAGGCCTTG
GAATTGCTGGACAAGATGAAGGAGGAGGAGGGGGAGGGAGGGAGGGAGGT
AGGGGTGAAGCCCAATGCGGTGGTGTACACTGCGGCGATCGATGCGTGTG
CAAGGAGTGGAATGGTAGAGGAGGCGGTGGGCCTGTTGAGAGAGATGGAG
GGAGGGAGGGAGGGAGGGGGCCTGCCTCCGAACCCTGTGGCGTATGGATG
CGCGATCAATGCTTGCGCAAAGGCCAGGGAGGGACGGAAGGCGGTTATGC
TGTTGAGGGAGATGCAGAAGAAGGGCTTGGAAGTGACGGAGATTCACTAC
GGCGCCGCTATCAACGGCCTAAACCTAAGCGAGGAGGACGATGAACTTTT
GTTGCATCTCTACGAGGAGGCGAGAGGGAGGGGGGTGACGATGGTGGTGG
GCATGTGGGCGGCTGCTATCAAAGCAGGGGATCGGATGGGGGCCTATGAA
AGAGTACTGAAGGTGGGAGGAGAGATGATGGAGTGTGGACAGAGTCCGAA
CAAGAAGGCCTTGAAATTGTTGATGCTAGCGGCGGAGAGGGGTGGGAGGT
ATGAGGAGGGGGTGGGACTGTTTGAGAGGGTCGTGGGAGAAGGAGGGATG
GAGCCGTGTGAGGCGGCGAATAAGTATGCCTTGGTGTGTGCAGAGAAGGT
GGGGAATACGATGACGATGTTGGGATGCATGAAGAGGGCTGAGAGGATGG
GTTGGAGAGGAGAGGGGAAGGGGGTGGAAGAGTGGATGTGCCGCTTGGCG
GCACGGGCGTTAAATCGGGTGGAAATAGAGAAGGAGTGCATAGGAGGGTG
GGATGAAAAGGAGAGGTGGATGGCAGTAGCGGAATTGGAGGCGATGGTGG
GGTTGTGGAGGAGGAGAGCGGAAGAGGAGACCTGGCGGAAGAAAAACGGG
GGAGGGGTGTGAATGGCACCACGGGCACTGTGGCTGCTGGAGACAATTGA
GGAGGGAGAGGAGGAGGAAGGGAATGGGAATGGCCTTAGCACAAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGAAGAGAGAGAAAGAAACCGACT
TCCGCAGATTACCATGGAGTCATTTATTTATTGGTGCGGGGGGGATTGGT
CGACGAGGGGCTTGCCCTGCTTCGGCGTCTGGTAGCCCAGGGGGATGAGA
GGCCCTTGCGCTCATCTTATCGAGTCCTTATATCCGGGTACTGTCGGCTG
GGACGGAGGAAGAGTGCTCTGTACCTCCTGCAGGACCTGAGACAATATGG
CCTGGCTCTTCCTTTATCGTCGTATAGCCGGGTGATGAAGGGCCTGGGGG
AGGGCGGGAGGGAGGACGAGGCGTTGGAGTTGTTAAAGAACATGAGGGCC
CGAGGCCTTAAGCCGGACGTGTGGTGCAGTAACTACGCTCTCATGGCATG
CGCGAGGAGTGAGGGGAAGGAGGGAGGGAGGGTCGTCTGGGAGGTGTTGG
ATGAGATGGAGGAGGAGGAGAGGAGTGCCTTTACCTATTCCTTGGTCATC
GAGGGATTGGGAAAGGCGGGGCGGTGGGAGGAGGCCAGGGGGGTTTTGTT
TGAGATGAAGAAAAAGGGGATTCAGCCTTCTGTGGGGTGTTACAGCTCGG
CTATAAACGCATTGGGGAAGGCAGGGAGGGCGATGGAGGCCTTGGAATTG
CTGGACAAGATGAAGGAGGAGGAGGGGGAGGGAGGGAGGGAGGTAGGGGT
GAAGCCCAATGCGGTGGTGTACACTGCGGCGATCGATGCGTGTGCAAGGA
GTGGAATGGTAGAGGAGGCGGTGGGCCTGTTGAGAGAGATGGAGGGAGGG
AGGGAGGGAGGGGGCCTGCCTCCGAACCCTGTGGCGTATGGATGCGCGAT
CAATGCTTGCGCAAAGGCCAGGGAGGGACGGAAGGCGGTTATGCTGTTGA
GGGAGATGCAGAAGAAGGGCTTGGAAGTGACGGAGATTCACTACGGCGCC
GCTATCAACGGCCTAAACCTAAGCGAGGAGGACGATGAACTTTTGTTGCA
TCTCTACGAGGAGGCGAGAGGGAGGGGGGTGACGATGGTGGTGGGCATGT
GGGCGGCTGCTATCAAAGCAGGGGATCGGATGGGGGCCTATGAAAGAGTA
CTGAAGGTGGGAGGAGAGATGATGGAGTGTGGACAGAGTCCGAACAAGAA
GGCCTTGAAATTGTTGATGCTAGCGGCGGAGAGGGGTGGGAGGTATGAGG
AGGGGGTGGGACTGTTTGAGAGGGTCGTGGGAGAAGGAGGGATGGAGCCG
TGTGAGGCGGCGAATAAGTATGCCTTGGTGTGTGCAGAGAAGGTGGGGAA
TACGATGACGATGTTGGGATGCATGAAGAGGGCTGAGAGGATGGGTTGGA
GAGGAGAGGGGAAGGGGGTGGAAGAGTGGATGTGCCGCTTGGCGGCACGG
GCGTTAAATCGGGTGGAAATAGAGAAGGAGTGCATAGGAGGGTGGGATGA
AAAGGAGAGGTGGATGGCAGTAGCGGAATTGGAGGCGATGGTGGGGTTGT
GGAGGAGGAGAGCGGAAGAGGAGACCTGGCGGAAGAAAAACGGGGGAGGG
GTGTGAATGGCACCACGGGCACTGTGGCTGCTGGAGACAATTGAGGAGGG
AGAGGAGGAGGAAGGGAATGGGAATGGCCTTAGCACAAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGAAGAGAGAGAAAGAAACCGACTTCCGCA
GATTACCATGGAGTCATTTATTTATTGGTGCGGGGGGGATTGGTCGACGA
GGGGCTTGCCCTGCTTCGGCGTCTGGTAGCCCAGGGGGATGAGAGGCCCT
TGCGCTCATCTTATCGAGTCCTTATATCCGGGTACTGTCGGCTGGGACGG
AGGAAGAGTGCTCTGTACCTCCTGCAGGACCTGAGACA back to top
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