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Properties
| Property Name | Value |
|---|
| TranscriptId | 602726 |
| Track | FilteredModels2 |
| ProteinId | 602640 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_25 | supercontig | scaffold_25:274493..277294 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8149 ID=mRNA_8149|Name=jgi.p|Nanoce1779_2|602640|organism=Nannochloropsis oceanica|type=mRNA|length=2284bp
AACAGACGGCGACAAAGGAGGAACTTGCAATTAGACATTATCATTACCAT
GCCACCGCCAGAAGCGGGTAACCCGGCGTGGCAGGCGGCGGGTCTCCGCA
GTACTACTTGCCATAATGAACAGGGAGAGCCTCGCGACGCTGAGCCTAGT
GAAGGTCCGACTCCTCGACCAAAACCAGAACCGCGACCGTCACTATTAAC
GCCACCACCAAGTTCTAGCAGGTCATGGCGGGGGAGGCTAGCCAGTACGA
TACTAGTCTTGGCAGCTGTCGGACTGGTCGTTGCCGCCTTTATTCCGAGA
CCACGCCACACCGCATTCTCGCCGCCATCCGAGCAGTCACAAGTTGAAAT
AGTATCAGTACAAGCGTTTGATGGTGACCAGATTCCCTCTTCAACAGCAA
CAAGCCCACCCGGATCAGAGGCGGCAGAGATCGCAACTGTCCTACCCGGG
ACGAAGAGCTCGACGACCGTAACTCCGGGCTCGCCGACTACCACCACGGG
CTCGTCGACTGCTGCGATCAAAACCAAGGACCTTTTCACCTCCACGCTCC
TGGCAGGGGGCCTCCAAAGTGTCCAGCAGGAACAGCAGGCAGGAGCACCA
TCGGCGTCTAAGGGAGTATGCTTCGCGAGCGACATGCCCGAGCTTCTGGA
GGCCCTAGATGACGATTCGGGCTGTAGCATCATTAACTTGGTAATATTAG
CGGATGAAAGCAACGGAGAGAACGGCAATGACACCCCTTTTATTTTCGAA
AACGAAGTACTAGTTTCGAGCCGGGTCGTAATTCAAGGCAACAGTGTGGT
GCTCCCGCTCTTGGACTGCAGCTCATCGATTCGATGCTTTCGAGTCCTGA
CCGGTGGGTATCTGGAGCTGCGATATGTGCGAATCAATCAATCAAATGTT
GGAGTGTTGCGTCCTGTGAGACCCCTTCTTGAGGGAATAACGCCCACGGG
GATGGTAAAAGAGTACCGGGGGAGCAGTGTCTATTTTGAACCAGATGCGA
CGGGCGGTCGATTCTTGGGCGTTATTTTCGACGATGATCAGAGCGATGAG
TTTGAACAGATTCTGGAACAGAGCTTGGCCTTAACGAGTAATCGCATATA
CGGTGGCTTCATTTTTATGGCTGGTGGACGGTTGGAATTCGAATTGTGCT
TGTTTTGGGATTTCGAATATATGACCCCCTTGGATCGGATCTACGTGGGC
GGGGACGTGTTGGTCTTGGCGGGAGAAGTGAGCTTCATTGGCTGTGTCTG
GATTTATACAACCTTTTTTGGTCTTGAGAATGGTGCGGGGTTCAACATCG
CCTTGTTGGGCGGCGTGGCCACGTACACGCTTTGTGAGGTACGTTTTGCT
TTTGCTAGCCCTTAGCCTTTCAAACCGTTATCCTAGCATGGCCGTTATCC
TAGCATGGCACCCCACCTCCTTCCCCATTTCTTGTCTCACAGTTCGCGGA
AATCAATGGATTCCTGGGCATGAACGGCGTCGGACAGGCCTTCATGGTCG
CTGGAGGGGTTCAAGTCCTCACGGGCTGCTCCCTTACCTATTTTAGTATT
GCCGCATTTTTCAGTGGGACCGGGGAAATGACTGTGTTCGGGGGCGCAAT
TATTGCTGTGGGCACGAGCTTGGTTGATGCCTATGGCTTGCTTGCGTCGT
TTGGCGCGGGTATGGATTATTGTGTTACTGCGGGGTTGCTGGTCCACATT
GGCTCGACAGTCAAACAGTACTCCGGACCTTTGACGATGAATATGGTGGG
GGGCTATAGCTTCTTGGGGACTGGGACGTATGTGGGAATTGGCTCACCTG
CTTTGGCCACAGTGACGACTATTCAGGAGTCAGGCACGGGCGGCACCTGG
TACAATGCGGCGGGGGTCAGCACCTTCATTGGCTGTAGCATCACTGAATT
CACCGGCATCTCGGCTGCCAACATCTTGGGGGAATTTGCGGCGGTTAGTG
CTGGTTTGCTCATCTGGATCGGGAGCCCCTTCATCGAGTACAGCGGCATA
GAATATTTTAAAGGCCTGGGAGGAACCGCGTACGTCGGCACAGGAGCTGC
TGTTTTCGGTTACTCCCCTCTCGTGGAGGCAATCGGTATAGTGAATCCGC
ACACCGACTTTTGGATTCAAGGGAGTTGTGAGTCCTATGAGGGTGAATGG
GCTAGTGGGCCATTGTTTTTCGTGACGGGGAGTCCTCCGGGCAATTGTCA
GGATCATGTGGCGACTCCTCCGCCGGAAAGGAGGAGAGAAAGGGAGGTGG
AGGAAGGAGCGAGGGAGGACGAGGAAGGAGCGGT back to topprotein sequence of jgi.p|Nanoce1779_2|602640 >mRNA_8149-protein ID=mRNA_8149-protein|Name=jgi.p|Nanoce1779_2|602640|organism=Nannochloropsis oceanica|type=polypeptide|length=439bp
MPPPEAGNPAWQAAGLRSTTCHNEQGEPRDAEPSEGPTPRPKPEPRPSLL
TPPPSSSRSWRGRLASTILVLAAVGLVVAAFIPRPRHTAFSPPSEQSQVE
IVSVQAFDGDQIPSSTATSPPGSEAAEIATVLPGTKSSTTVTPGSPTTTT
GSSTAAIKTKDLFTSTLLAGGLQSVQQEQQAGAPSASKGVCFASDMPELL
EALDDDSGCSIINLVILADESNGENGNDTPFIFENEVLVSSRVVIQGNSV
VLPLLDCSSSIRCFRVLTGGYLELRYVRINQSNVGVLRPVRPLLEGITPT
GMVKEYRGSSVYFEPDATGGRFLGVIFDDDQSDEFEQILEQSLALTSNRI
YGGFIFMAGGRLEFELCLFWDFEYMTPLDRIYVGGDVLVLAGEVSFIGCV
WIYTTFFGLENGAGFNIALLGGVATYTLCEVRFAFASP* back to topmRNA from alignment at scaffold_25:274493..277294- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8149 ID=mRNA_8149|Name=jgi.p|Nanoce1779_2|602640|organism=Nannochloropsis oceanica|type=mRNA|length=2802bp|location=Sequence derived from alignment at scaffold_25:274493..277294- (Nannochloropsis oceanica)
AACAGACGGCGACAAAGGAGGAACTTGCAATTAGACATTATCATTACCAT
GCCACCGCCAGAAGCGGGTAACCCGGCGTGGCAGGCGGCGGGTCTCCGCA
GTACTACTTGCCATAATGAACAGGGAGAGCCTCGCGACGCTGAGCCTAGT
GAAGGTCCGACTCCTCGACCAAAACCAGAACCGCGACCGTCACTATTAAC
GCCACCACCAAGTTCTAGCAGGTCATGGCGGGGGAGGCTAGCCAGTACGA
TACTAGTCTTGGCAGCTGTCGGACTGGTCGTTGCCGCCTTTATTCCGGTA
AGTTTCGATCATGACAGCTTGGATAGTGATCTTCACTTCAAATGTTATGG
TTATGTAATCATTCACTGGACTTTGCCGCTGTCATCTTTAATCTATGTTA
AGGCAAAGCATGGGCGACTACACCAACCGCGACCCAGAACGCACAAATAG
GCCCCAAGCTCACGCCCTGAACGACGTGGGATCCTACCTCTCCCGATACA
CATGCACACAGAGACCACGCCACACCGCATTCTCGCCGCCATCCGAGCAG
TCACAAGTTGAAATAGTATCAGTACAAGCGTTTGATGGTGACCAGATTCC
CTCTTCAACAGCAACAAGCCCACCCGGATCAGAGGCGGCAGAGATCGCAA
CTGTCCTACCCGGGACGAAGAGCTCGACGACCGTAACTCCGGGCTCGCCG
ACTACCACCACGGGCTCGTCGACTGCTGCGATCAAAACCAAGGACCTTTT
CACCTCCACGCTCCTGGCAGGGGGCCTCCAAAGTGTCCAGCAGGAACAGC
AGGCAGGAGCACCATCGGCGTCTAAGGGAGTATGCTTCGCGAGCGACATG
CCCGAGCTTCTGGAGGCCCTAGATGACGATTCGGGCTGTAGCATCATTAA
CTTGGTAATATTAGCGGATGAAAGCAACGGAGAGAACGGCAATGACACCC
CTTTTATTTTCGAAAACGAAGTACTAGTTTCGAGCCGGGTCGTAATTCAA
GGCAACAGTGTGGTGCTCCCGCTCTTGGACTGCAGCTCATCGATTCGATG
CTTTCGAGTCCTGACCGGTGGGTATCTGGAGCTGCGATATGTGCGAATCA
ATCAATCAAATGTTGGAGTGTTGCGTCCTGTGAGACCCCTTCTTGAGGGA
ATAACGCCCACGGGGATGGTAAAAGAGTACCGGGGGAGCAGTGTCTATTT
TGAACCAGATGCGACGGGCGGTCGATTCTTGGGCGTTATTTTCGACGATG
ATCAGAGCGATGAGTTTGAACAGATTCTGGAACAGAGCTTGGCCTTAACG
AGTAATCGCATATACGGTGGCTTCATTTTTATGGCTGGTGGACGGTTGGA
ATTCGAATTGTGCTTGTTTTGGGATTTCGAATATATGACCCCCTTGGATC
GGATCTACGTGGGCGGGGACGTGTTGGTCTTGGCGGGAGAAGTGAGCTTC
ATTGGCTGTGTCTGGATTTATACAACCTTTTTTGGTCTTGAGAATGGTGC
GGGGTTCAACATCGCCTTGTTGGGCGGCGTGGCCACGTACACGCTTTGTG
AGGTACGTTTTGCTTTTGCTAGCCCTTAGCCTTTCAAACCGTTATCCTAG
CATGGCCGTTATCCTAGCATGGCACCCCACCTCCTTCCCCATTTCTTGTC
TCACAGTTCGCGGAAATCAATGGATTCCTGGGCATGAACGGCGTCGGACA
GGCCTTCATGGTCGCTGGAGGGGTTCAAGTCCTCACGGGCTGCTCCCTTA
CCTATTTTAGTATTGCCGCATTTTTCAGTGGGACCGGGGAAATGACTGTG
TTCGGGGGCGCAATTATTGCTGTGGGCACGAGCTTGGTTGATGCCTATGG
CTTGCTTGCGTCGTTTGGCGCGGGTATGGATTATTGTGTTACTGCGGGGT
TGCTGGTCCACATTGGCTCGACAGTCAAACAGTACTCCGGACCTTTGACG
ATGAATATGGTGGGGGGCTATAGCTTCTTGGGGACTGGGACGTATGTGGG
AATTGGCTCACCTGCTTTGGCCACAGTGACGACTATTCAGGAGTCAGGCA
CGGTGAGTACCAGGCAGAGAGGGGGGGGGGGAGAGGGGAGTTTATTTCAC
TTCCACATGCGTGTGCTTCGTCTGCGCATGTACTCGATCTTGACTTTTCT
CCTGCCATCCTCCTTCCCTCTTTCCTTTCCTCTCCCCACCTCCCTTCGTT
TCTAGGGCGGCACCTGGTACAATGCGGCGGGGGTCAGCACCTTCATTGGC
TGTAGCATCACTGAATTCACCGGCATCTCGGCTGCCAACATCTTGGGGGA
ATTTGCGGCGGTTAGTGGTAAGTGAATAGGGAGAAATAGATAAGAGGAAA
AGAGGCAGGGTATCTTGTGCTGAGCAGCGACTCCTGAACAAGTTTCACAC
GTGACATCCTCTCCCTTTCTCCCTCCCCTCTTCCTTCCTTTCTTTCTTCC
GTTCTCTCTTCTTCCCAGCTGGTTTGCTCATCTGGATCGGGAGCCCCTTC
ATCGAGTACAGCGGCATAGAATATTTTAAAGGCCTGGGAGGAACCGCGTA
CGTCGGCACAGGAGCTGCTGTTTTCGGTTACTCCCCTCTCGTGGAGGCAA
TCGGTATAGTGAATCCGCACACCGACTTTTGGATTCAAGGGAGTTGTGAG
TCCTATGAGGGTGAATGGGCTAGTGGGCCATTGTTTTTCGTGACGGGGAG
TCCTCCGGGCAATTGTCAGGATCATGTGGCGACTCCTCCGCCGGAAAGGA
GGAGAGAAAGGGAGGTGGAGGAAGGAGCGAGGGAGGACGAGGAAGGAGCG
GT back to topCoding sequence (CDS) from alignment at scaffold_25:274493..277294- >mRNA_8149 ID=mRNA_8149|Name=jgi.p|Nanoce1779_2|602640|organism=Nannochloropsis oceanica|type=CDS|length=2634bp|location=Sequence derived from alignment at scaffold_25:274493..277294- (Nannochloropsis oceanica)
AGACCACGCCACACCGCATTCTCGCCGCCATCCGAGCAGTCACAAGTTGA
AATAGTATCAGTACAAGCGTTTGATGGTGACCAGATTCCCTCTTCAACAG
CAACAAGCCCACCCGGATCAGAGGCGGCAGAGATCGCAACTGTCCTACCC
GGGACGAAGAGCTCGACGACCGTAACTCCGGGCTCGCCGACTACCACCAC
GGGCTCGTCGACTGCTGCGATCAAAACCAAGGACCTTTTCACCTCCACGC
TCCTGGCAGGGGGCCTCCAAAGTGTCCAGCAGGAACAGCAGGCAGGAGCA
CCATCGGCGTCTAAGGGAGTATGCTTCGCGAGCGACATGCCCGAGCTTCT
GGAGGCCCTAGATGACGATTCGGGCTGTAGCATCATTAACTTGGTAATAT
TAGCGGATGAAAGCAACGGAGAGAACGGCAATGACACCCCTTTTATTTTC
GAAAACGAAGTACTAGTTTCGAGCCGGGTCGTAATTCAAGGCAACAGTGT
GGTGCTCCCGCTCTTGGACTGCAGCTCATCGATTCGATGCTTTCGAGTCC
TGACCGGTGGGTATCTGGAGCTGCGATATGTGCGAATCAATCAATCAAAT
GTTGGAGTGTTGCGTCCTGTGAGACCCCTTCTTGAGGGAATAACGCCCAC
GGGGATGGTAAAAGAGTACCGGGGGAGCAGTGTCTATTTTGAACCAGATG
CGACGGGCGGTCGATTCTTGGGCGTTATTTTCGACGATGATCAGAGCGAT
GAGTTTGAACAGATTCTGGAACAGAGCTTGGCCTTAACGAGTAATCGCAT
ATACGGTGGCTTCATTTTTATGGCTGGTGGACGGTTGGAATTCGAATTGT
GCTTGTTTTGGGATTTCGAATATATGACCCCCTTGGATCGGATCTACGTG
GGCGGGGACGTGTTGGTCTTGGCGGGAGAAGTGAGCTTCATTGGCTGTGT
CTGGATTTATACAACCTTTTTTGGTCTTGAGAATGGTGCGGGGTTCAACA
TCGCCTTGTTGGGCGGCGTGGCCACGTACACGCTTTGTGAGGTACGTTTT
GCTTTTGCTAGCCCTTAGATGCCACCGCCAGAAGCGGGTAACCCGGCGTG
GCAGGCGGCGGGTCTCCGCAGTACTACTTGCCATAATGAACAGGGAGAGC
CTCGCGACGCTGAGCCTAGTGAAGGTCCGACTCCTCGACCAAAACCAGAA
CCGCGACCGTCACTATTAACGCCACCACCAAGTTCTAGCAGGTCATGGCG
GGGGAGGCTAGCCAGTACGATACTAGTCTTGGCAGCTGTCGGACTGGTCG
TTGCCGCCTTTATTCCGAGACCACGCCACACCGCATTCTCGCCGCCATCC
GAGCAGTCACAAGTTGAAATAGTATCAGTACAAGCGTTTGATGGTGACCA
GATTCCCTCTTCAACAGCAACAAGCCCACCCGGATCAGAGGCGGCAGAGA
TCGCAACTGTCCTACCCGGGACGAAGAGCTCGACGACCGTAACTCCGGGC
TCGCCGACTACCACCACGGGCTCGTCGACTGCTGCGATCAAAACCAAGGA
CCTTTTCACCTCCACGCTCCTGGCAGGGGGCCTCCAAAGTGTCCAGCAGG
AACAGCAGGCAGGAGCACCATCGGCGTCTAAGGGAGTATGCTTCGCGAGC
GACATGCCCGAGCTTCTGGAGGCCCTAGATGACGATTCGGGCTGTAGCAT
CATTAACTTGGTAATATTAGCGGATGAAAGCAACGGAGAGAACGGCAATG
ACACCCCTTTTATTTTCGAAAACGAAGTACTAGTTTCGAGCCGGGTCGTA
ATTCAAGGCAACAGTGTGGTGCTCCCGCTCTTGGACTGCAGCTCATCGAT
TCGATGCTTTCGAGTCCTGACCGGTGGGTATCTGGAGCTGCGATATGTGC
GAATCAATCAATCAAATGTTGGAGTGTTGCGTCCTGTGAGACCCCTTCTT
GAGGGAATAACGCCCACGGGGATGGTAAAAGAGTACCGGGGGAGCAGTGT
CTATTTTGAACCAGATGCGACGGGCGGTCGATTCTTGGGCGTTATTTTCG
ACGATGATCAGAGCGATGAGTTTGAACAGATTCTGGAACAGAGCTTGGCC
TTAACGAGTAATCGCATATACGGTGGCTTCATTTTTATGGCTGGTGGACG
GTTGGAATTCGAATTGTGCTTGTTTTGGGATTTCGAATATATGACCCCCT
TGGATCGGATCTACGTGGGCGGGGACGTGTTGGTCTTGGCGGGAGAAGTG
AGCTTCATTGGCTGTGTCTGGATTTATACAACCTTTTTTGGTCTTGAGAA
TGGTGCGGGGTTCAACATCGCCTTGTTGGGCGGCGTGGCCACGTACACGC
TTTGTGAGGTACGTTTTGCTTTTGCTAGCCCTTAGATGCCACCGCCAGAA
GCGGGTAACCCGGCGTGGCAGGCGGCGGGTCTCCGCAGTACTACTTGCCA
TAATGAACAGGGAGAGCCTCGCGACGCTGAGCCTAGTGAAGGTCCGACTC
CTCGACCAAAACCAGAACCGCGACCGTCACTATTAACGCCACCACCAAGT
TCTAGCAGGTCATGGCGGGGGAGGCTAGCCAGTACGATACTAGTCTTGGC
AGCTGTCGGACTGGTCGTTGCCGCCTTTATTCCG back to top
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