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Properties
| Property Name | Value |
|---|
| TranscriptId | 574315 |
| Track | FilteredModels2 |
| ProteinId | 574229 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:492356..493662 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_812 ID=mRNA_812|Name=jgi.p|Nanoce1779_2|574229|organism=Nannochloropsis oceanica|type=mRNA|length=998bp
ACAGGTACCATCGCCATGGCTAGACCTTCTTTTTTCCTGGTGGTTGCCTC
TCTTCTACTGGCCCCGGCGCAGGCATTTCTGCGGCATGCCACTCCACGAA
CTCGTAACAGGGCCACAGTGCGGATGATGGCAGCCGGCATCGGCAACAAG
GCGAGCTGGGCGCTTTTGTTTGACTGCGACGGCGTCCTGGCTGACACAGA
GCGAGACGGACATCGTCCATGCTTCAATATTGCTTTTCAGCAAAAAGGGA
TCGACTGCACTTGGGACGTCGATTTGTATGGCAAGCTTCTTGAGGTTGGT
GGCGGGAAGGAACGCATGACGGCACATTGGAACAAGGTCGGCTGGCCCCC
AGGGTATGACACTGATTTTTCCCGCAAAGAGCTCGTGCAAGAACTCCACC
TGCTTAAAACCAAGCTATTTATGGATTATATTGAAGGAGGCAAGCTGCCT
TTGCGTCCAGGGGTGTTGCGTGTAGTAGATGCCGCCATTGCTGCAGGGGT
GCCTCTCGGAGTGTGCTCCACGTCAAATGACAAGGCCGTGCGCACGTTGG
TCCGTGTCTTGATGGGTAAGGAACGGGAGGCTAAACTCAAGATCTTCGCA
GGGGATGTCGTCCCGAAGAAAAAGCCATCGCCTGACATTTATTTGTTGGC
GAAGGAGACCATGGGTTTGGATGCTGCTCATACCGTTGTGATAGAAGATT
CGCATATTGGTCTCACAGCCGCTAAGGCGGCAGGAATGATGTGCGTGGTA
ACGAAGAGCTCCTACACTGAAAAAGAGGATTTCCGGGCGGCTGATCGGGT
GATTGCTGAATTGGGGGAAAGTGAGGAGAAGGGGGGAATTTCTTTTGAGG
AGTTGGTGGCTTTAGGGATGGGAGGAGGAAGGATTTGAGAGGAGGATGTC
ATGGAGTGACGGAGAGGTCGAGTACGCTATGTACATTGGGAACTTATTAC
AGTGCACGTACTAATGAGTGTACAAATAGAAAAATAGACTAGTCGTTG back to topprotein sequence of jgi.p|Nanoce1779_2|574229 >mRNA_812-protein ID=mRNA_812-protein|Name=jgi.p|Nanoce1779_2|574229|organism=Nannochloropsis oceanica|type=polypeptide|length=291bp
MARPSFFLVVASLLLAPAQAFLRHATPRTRNRATVRMMAAGIGNKASWAL
LFDCDGVLADTERDGHRPCFNIAFQQKGIDCTWDVDLYGKLLEVGGGKER
MTAHWNKVGWPPGYDTDFSRKELVQELHLLKTKLFMDYIEGGKLPLRPGV
LRVVDAAIAAGVPLGVCSTSNDKAVRTLVRVLMGKEREAKLKIFAGDVVP
KKKPSPDIYLLAKETMGLDAAHTVVIEDSHIGLTAAKAAGMMCVVTKSSY
TEKEDFRAADRVIAELGESEEKGGISFEELVALGMGGGRI* back to topmRNA from alignment at scaffold_2:492356..493662- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_812 ID=mRNA_812|Name=jgi.p|Nanoce1779_2|574229|organism=Nannochloropsis oceanica|type=mRNA|length=1307bp|location=Sequence derived from alignment at scaffold_2:492356..493662- (Nannochloropsis oceanica)
ACAGGTACCATCGCCATGGCTAGACCTTCTTTTTTCCTGGTGGTTGCCTC
TCTTCTACTGGCCCCGGCGCAGGCATTTCTGCGGCATGCCACTCCACGAA
CTCGTAACAGGGCCACAGTGCGGATGATGGCAGCCGGCATCGGCAACAAG
GCGAGCTGGGCGCTTTTGTTTGACTGCGACGGCGTCCTGGCTGACACAGA
GCGAGACGGACATCGTCCATGCTTCAATATTGCTTTTCAGCAAAAAGGGA
TCGACTGCACTTGGGACGTCGATTTGTATGGCAAGCTTCTTGAGGTACGT
CCCTGCGCTTTGTATGTGAGCCATGAGCATTCAGCCAAGCCATAACTCTG
TATAATTCGTTGGGTGGAAGCTTGACTGTGCAAAATTACTTTCAATTAGC
TTAAGGGCTTATGTACGAAGCAAATCTTGGAGGCCGGTGGGGTATATATG
CTCCTAGCTGACCATGTCGTCCATCATCCACCCAACCCTCGCCTCCACAA
CCTTCCCCCCTCAATTCAACATCCACACACAAATTGCAAAAAAAAAATGT
CCACAAAATCCCTAATGACTGCTCTTCTACCATTTACATAACATAATGCA
TAGGTTGGTGGCGGGAAGGAACGCATGACGGCACATTGGAACAAGGTCGG
CTGGCCCCCAGGGTATGACACTGATTTTTCCCGCAAAGAGCTCGTGCAAG
AACTCCACCTGCTTAAAACCAAGCTATTTATGGATTATATTGAAGGAGGC
AAGCTGCCTTTGCGTCCAGGGGTGTTGCGTGTAGTAGATGCCGCCATTGC
TGCAGGGGTGCCTCTCGGAGTGTGCTCCACGTCAAATGACAAGGCCGTGC
GCACGTTGGTCCGTGTCTTGATGGGTAAGGAACGGGAGGCTAAACTCAAG
ATCTTCGCAGGGGATGTCGTCCCGAAGAAAAAGCCATCGCCTGACATTTA
TTTGTTGGCGAAGGAGACCATGGGTTTGGATGCTGCTCATACCGTTGTGA
TAGAAGATTCGCATATTGGTCTCACAGCCGCTAAGGCGGCAGGAATGATG
TGCGTGGTAACGAAGAGCTCCTACACTGAAAAAGAGGATTTCCGGGCGGC
TGATCGGGTGATTGCTGAATTGGGGGAAAGTGAGGAGAAGGGGGGAATTT
CTTTTGAGGAGTTGGTGGCTTTAGGGATGGGAGGAGGAAGGATTTGAGAG
GAGGATGTCATGGAGTGACGGAGAGGTCGAGTACGCTATGTACATTGGGA
ACTTATTACAGTGCACGTACTAATGAGTGTACAAATAGAAAAATAGACTA
GTCGTTG back to topCoding sequence (CDS) from alignment at scaffold_2:492356..493662- >mRNA_812 ID=mRNA_812|Name=jgi.p|Nanoce1779_2|574229|organism=Nannochloropsis oceanica|type=CDS|length=1746bp|location=Sequence derived from alignment at scaffold_2:492356..493662- (Nannochloropsis oceanica)
GTTGGTGGCGGGAAGGAACGCATGACGGCACATTGGAACAAGGTCGGCTG
GCCCCCAGGGTATGACACTGATTTTTCCCGCAAAGAGCTCGTGCAAGAAC
TCCACCTGCTTAAAACCAAGCTATTTATGGATTATATTGAAGGAGGCAAG
CTGCCTTTGCGTCCAGGGGTGTTGCGTGTAGTAGATGCCGCCATTGCTGC
AGGGGTGCCTCTCGGAGTGTGCTCCACGTCAAATGACAAGGCCGTGCGCA
CGTTGGTCCGTGTCTTGATGGGTAAGGAACGGGAGGCTAAACTCAAGATC
TTCGCAGGGGATGTCGTCCCGAAGAAAAAGCCATCGCCTGACATTTATTT
GTTGGCGAAGGAGACCATGGGTTTGGATGCTGCTCATACCGTTGTGATAG
AAGATTCGCATATTGGTCTCACAGCCGCTAAGGCGGCAGGAATGATGTGC
GTGGTAACGAAGAGCTCCTACACTGAAAAAGAGGATTTCCGGGCGGCTGA
TCGGGTGATTGCTGAATTGGGGGAAAGTGAGGAGAAGGGGGGAATTTCTT
TTGAGGAGTTGGTGGCTTTAGGGATGGGAGGAGGAAGGATTTGAATGGCT
AGACCTTCTTTTTTCCTGGTGGTTGCCTCTCTTCTACTGGCCCCGGCGCA
GGCATTTCTGCGGCATGCCACTCCACGAACTCGTAACAGGGCCACAGTGC
GGATGATGGCAGCCGGCATCGGCAACAAGGCGAGCTGGGCGCTTTTGTTT
GACTGCGACGGCGTCCTGGCTGACACAGAGCGAGACGGACATCGTCCATG
CTTCAATATTGCTTTTCAGCAAAAAGGGATCGACTGCACTTGGGACGTCG
ATTTGTATGGCAAGCTTCTTGAGGTTGGTGGCGGGAAGGAACGCATGACG
GCACATTGGAACAAGGTCGGCTGGCCCCCAGGGTATGACACTGATTTTTC
CCGCAAAGAGCTCGTGCAAGAACTCCACCTGCTTAAAACCAAGCTATTTA
TGGATTATATTGAAGGAGGCAAGCTGCCTTTGCGTCCAGGGGTGTTGCGT
GTAGTAGATGCCGCCATTGCTGCAGGGGTGCCTCTCGGAGTGTGCTCCAC
GTCAAATGACAAGGCCGTGCGCACGTTGGTCCGTGTCTTGATGGGTAAGG
AACGGGAGGCTAAACTCAAGATCTTCGCAGGGGATGTCGTCCCGAAGAAA
AAGCCATCGCCTGACATTTATTTGTTGGCGAAGGAGACCATGGGTTTGGA
TGCTGCTCATACCGTTGTGATAGAAGATTCGCATATTGGTCTCACAGCCG
CTAAGGCGGCAGGAATGATGTGCGTGGTAACGAAGAGCTCCTACACTGAA
AAAGAGGATTTCCGGGCGGCTGATCGGGTGATTGCTGAATTGGGGGAAAG
TGAGGAGAAGGGGGGAATTTCTTTTGAGGAGTTGGTGGCTTTAGGGATGG
GAGGAGGAAGGATTTGAATGGCTAGACCTTCTTTTTTCCTGGTGGTTGCC
TCTCTTCTACTGGCCCCGGCGCAGGCATTTCTGCGGCATGCCACTCCACG
AACTCGTAACAGGGCCACAGTGCGGATGATGGCAGCCGGCATCGGCAACA
AGGCGAGCTGGGCGCTTTTGTTTGACTGCGACGGCGTCCTGGCTGACACA
GAGCGAGACGGACATCGTCCATGCTTCAATATTGCTTTTCAGCAAAAAGG
GATCGACTGCACTTGGGACGTCGATTTGTATGGCAAGCTTCTTGAG back to top
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