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Properties
| Property Name | Value |
|---|
| TranscriptId | 602611 |
| Track | FilteredModels2 |
| ProteinId | 602525 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_25 | supercontig | scaffold_25:184423..186801 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8110 ID=mRNA_8110|Name=jgi.p|Nanoce1779_2|602525|organism=Nannochloropsis oceanica|type=mRNA|length=2085bp
AGTCAACAGGGTATCGTACTATGGGTTGCGCAACTGCGCGTGGTAGTGTT
GTCTTCGTTGTCCTACCCCTCGTCCTCCTCACTTCTCTCCTTCTCCATCC
TTCTCAAGCCCGCTACTCGTTATCGTCGTCCTCCTCGACAAGCGGACCTT
CCATTTGGGGCGCCATCCTAGACGAAGAGCCTTACCTACCCTTTGTAGGA
AGTGGGATAAAACCTTCCTGCAGAAGTTCAAGCTCGGATGCCTCGGGCAT
GGTTACCGACTCTTGGTTGTCCTCCCTCGAGGCGTCGCTTCCGACGCACC
GCCCTCAAGCTTACAAATGGGGGCCCGAGATGGTGGAGGACAACGGCGGC
ACGGTCCTAGCATTGGCCGGGTCCGATTATTGCATTATCGGGGCAGATAC
GCGGTTGAGCTCCGATTATCGGATTCGGACGCGGAATGTGAGTCGGCTGA
TGGAGGTGTCGTCGCACACGTACATGGGCATGGCGGGGAGCTGGGCAGAT
TCGACGGCCTTGCGTCGCGAGATGGCGTATGACTTGAGCTGCTTCGAAGC
TAAGCATGGACGGCCGATTGGTACGGCGGCCCTTGGCACATTCTTGTCGA
ATTGCCTTTATTTGCACCGCCTGCAGCCTATGTATGCCCTCAATTTGGTC
GCGGGTTTGGATGATAAAGGCCGGGGCGCTATTTACAGCTATGACGTTAT
TGGCTCGTTTAATCGAGTAGCCGCCGCGTGCTGTGGCAGGGGGCAGGAAT
TGATGCAGCCTGTCCTGGATCAGTTCACGACCGAAGATCGTAATCAGAGC
GTACGACAGGGGTGTGTGCCCTTGTCGTGTGAAGAGGCACTGAGGGTGAT
GAAGGACGCGTTTTTGTCCGGGGCCGAAAGAGAGATAAGCATTGGGGATG
GGGTGGAGATTGTGGTTTTGCGAAAAGGACACCGACCTAGGGTGGAGAAA
TTAAAGCTACCACAGCACTGAACCAAAAAATCCATAGACCTGTCTTAAGC
TTTGACCCTTGTTTCATGGAAAATGAGTTTTTGCTTTCCGTTTTTATGCT
GGAGATCGGATCCGTTCTGCAGTTCGACGAGCATGATCAGGACGACGGCC
CTTGTGCGTGTCTCACAAGCCAAACTCAAACATGCCCTTCCTTCCACCTG
GAAACAAGATAAAGACAGGGGTGCATTTGCACTGACTTGATTGTCCGGCT
GTGGGCCGTGGAGGATGCCACAATCCAACCTTTTTTCGATCACCCGCAGC
ACCATCATCGCCCTTACTACCATTATGTCCGCCATCCTGACTACGCTGGC
CAGGGCTGGCCTCAGCAGCCTAACCACAGCAGTTTCCAGAACAACAACAA
CAACAACGACAACAAGAGGAGGGTGGTACGTAGGGCGTCTTATTCCCACC
GTCCAAGCTTTTGCCCCTCCCGCCTCCAGCCGTTCCTTCCGCCTGACCCC
TCGCTGCGACATGCCCCGCAGCGGGCTGACCATTCCCCATGATCGCCTCG
ACTTCAGCTACTCCAAGTCATCGGGCCCGGGTGGACAGAATGTCAATAAA
CTTAACACACGGGTGGAATTGCGTTTCCATGTGGAGAGTGCTGAATGGAT
ACCGCAGGGCATGCGCGGGCGGCTTTTGGAGCAGCAGCGGCATCGAGTCA
ACAAGGCGGGGGAGCTGGTACTATCCTCGCAGGAGCATCGGACACAGCTT
AAGAATCGTGAAGATTGCCTATCAAAGTTAGAGGAGGCATTGGCTCGGGC
GGCGATTGTGCCCAAGACGAGGAATATGCGAGTTGGATTGCAGGAATGGG
AGAAGGAAAACAGGTTGCGGGAGAAGAAAAAGAGGTCTGAAACGAAGAGC
GCGCGGAGGCAGAATAGAAAGTGGGATGAGTAGAAAGACAACTGCACACT
GGTGAGTAGGTTAACATTCAGTGGAGCAGTCACTGGACGGGGGATAGTAA
GAAGAGGAGGGTAGGGAAGAAGAAAGGGCTTTGTACAGTGCTGTATGTGT
AGTAAATTTGTGTCCTAGGGGAAAAGAGGAACTTTCACGACAGGTGGTAT
GACAAAGAAGAAGAGGGCCGTCTCTCTCGCTTTAA back to topprotein sequence of jgi.p|Nanoce1779_2|602525 >mRNA_8110-protein ID=mRNA_8110-protein|Name=jgi.p|Nanoce1779_2|602525|organism=Nannochloropsis oceanica|type=polypeptide|length=317bp
MGCATARGSVVFVVLPLVLLTSLLLHPSQARYSLSSSSSTSGPSIWGAIL
DEEPYLPFVGSGIKPSCRSSSSDASGMVTDSWLSSLEASLPTHRPQAYKW
GPEMVEDNGGTVLALAGSDYCIIGADTRLSSDYRIRTRNVSRLMEVSSHT
YMGMAGSWADSTALRREMAYDLSCFEAKHGRPIGTAALGTFLSNCLYLHR
LQPMYALNLVAGLDDKGRGAIYSYDVIGSFNRVAAACCGRGQELMQPVLD
QFTTEDRNQSVRQGCVPLSCEEALRVMKDAFLSGAEREISIGDGVEIVVL
RKGHRPRVEKLKLPQH* back to topmRNA from alignment at scaffold_25:184423..186801+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8110 ID=mRNA_8110|Name=jgi.p|Nanoce1779_2|602525|organism=Nannochloropsis oceanica|type=mRNA|length=2379bp|location=Sequence derived from alignment at scaffold_25:184423..186801+ (Nannochloropsis oceanica)
AGTCAACAGGGTATCGTACTATGGGTTGCGCAACTGCGCGTGGTAGTGTT
GTCTTCGTTGTCCTACCCCTCGTCCTCCTCACTTCTCTCCTTCTCCATCC
TTCTCAAGCCCGCTACTCGTTATCGTCGTCCTCCTCGACAAGCGGACCTT
CCATTTGGGGCGCCATCCTAGACGAAGAGCCTTACCTACCCTTTGTAGGA
AGTGGGATAAAACCTTCCTGCAGAAGTTCAAGCTCGGATGCCTCGGGCAT
GGTTACCGACTCTTGGTTGTCCTCCCTCGAGGCGTCGCTTCCGACGCACC
GCCCTCAAGCTTACAAATGGGGGCCCGAGATGGTGGAGGACAACGGCGGC
ACGGTCCTAGCATTGGCCGGGTCCGATTATTGCATTATCGGGGCAGATAC
GCGGTTGAGCTCCGATTATCGGATTCGGACGCGGAATGTGAGTCGGCTGA
TGGAGGTGTCGTCGCACACGTACATGGGCATGGCGGGGAGCTGGGCAGAT
TCGACGGCCTTGCGTCGCGAGGTAAGAAACATGAGTACGGTCAAATCAGG
TCACTTCCTACTGCGAACTTTATACTGCTTTGATGAATTTAAGGTCCTGA
TTTACTTGTCTTTCTACTCCATTCGTAATGGACTAGATGGCGTATGACTT
GAGCTGCTTCGAAGCTAAGCATGGACGGCCGATTGGTACGGCGGCCCTTG
GCACATTCTTGTCGAATTGCCTTTATTTGCACCGCCTGCAGCCTATGTAT
GCCCTCAATTTGGTCGCGGGTTTGGATGATAAAGGTAGGGGAGGAATGAA
TGGAAAGCAGAGGCGGACCTCTTTCTCATCGCGCACTCACATCTTTCTTT
TTCTTTCTCTCCATCCACATACACCACACCAGGCCGGGGCGCTATTTACA
GCTATGACGTTATTGGCTCGTTTAATCGAGTAGCCGCCGCGTGCTGTGGC
AGGGGGCAGGTGAGTATAATGTACACGGCAAGGAACCTCCAAAGCACCAA
CATCCTCCCTTCCCTCCCTTCACTCCCTGCCCATTTCCAGGAATTGATGC
AGCCTGTCCTGGATCAGTTCACGACCGAAGATCGTAATCAGAGCGTACGA
CAGGGGTGTGTGCCCTTGTCGTGTGAAGAGGCACTGAGGGTGATGAAGGA
CGCGTTTTTGTCCGGGGCCGAAAGAGAGATAAGCATTGGGGATGGGGTGG
AGATTGTGGTTTTGCGAAAAGGACACCGACCTAGGGTGGAGAAATTAAAG
CTACCACAGCACTGAACCAAAAAATCCATAGACCTGTCTTAAGCTTTGAC
CCTTGTTTCATGGAAAATGAGTTTTTGCTTTCCGTTTTTATGCTGGAGAT
CGGATCCGTTCTGCAGTTCGACGAGCATGATCAGGACGACGGCCCTTGTG
CGTGTCTCACAAGCCAAACTCAAACATGCCCTTCCTTCCACCTGGAAACA
AGATAAAGACAGGGGTGCATTTGCACTGACTTGATTGTCCGGCTGTGGGC
CGTGGAGGATGCCACAATCCAACCTTTTTTCGATCACCCGCAGCACCATC
ATCGCCCTTACTACCATTATGTCCGCCATCCTGACTACGCTGGCCAGGGC
TGGCCTCAGCAGCCTAACCACAGCAGTTTCCAGAACAACAACAACAACAA
CGACAACAAGAGGAGGGTGGTACGTAGGGCGTCTTATTCCCACCGTCCAA
GCTTTTGCCCCTCCCGCCTCCAGCCGTTCCTTCCGCCTGACCCCTCGCTG
CGACATGCCCCGCAGCGGGCTGACCATTCCCCATGATCGCCTCGACTTCA
GCTACTCCAAGTCATCGGGCCCGGGTGGACAGAATGTCAATAAACTTAAC
ACACGGGTGGAATTGCGTTTCCATGTGGAGAGTGCTGAATGGATACCGCA
GGGCATGCGCGGGCGGCTTTTGGAGCAGCAGCGGCATCGAGTCAACAAGG
CGGGGGAGCTGGTACTATCCTCGCAGGAGCATCGGACACAGCTTAAGAAT
CGTGAAGATTGCCTATCAAAGTTAGAGGAGGCATTGGCTCGGGCGGCGAT
TGTGCCCAAGACGAGGAATATGCGAGTTGGATTGCAGGAATGGGAGAAGG
AAAACAGGTTGCGGGAGAAGAAAAAGAGGTCTGAAACGAAGAGCGCGCGG
AGGCAGAATAGAAAGTGGGATGAGTAGAAAGACAACTGCACACTGGTGAG
TAGGTTAACATTCAGTGGAGCAGTCACTGGACGGGGGATAGTAAGAAGAG
GAGGGTAGGGAAGAAGAAAGGGCTTTGTACAGTGCTGTATGTGTAGTAAA
TTTGTGTCCTAGGGGAAAAGAGGAACTTTCACGACAGGTGGTATGACAAA
GAAGAAGAGGGCCGTCTCTCTCGCTTTAA back to topCoding sequence (CDS) from alignment at scaffold_25:184423..186801+ >mRNA_8110 ID=mRNA_8110|Name=jgi.p|Nanoce1779_2|602525|organism=Nannochloropsis oceanica|type=CDS|length=3804bp|location=Sequence derived from alignment at scaffold_25:184423..186801+ (Nannochloropsis oceanica)
ATGGGTTGCGCAACTGCGCGTGGTAGTGTTGTCTTCGTTGTCCTACCCCT
CGTCCTCCTCACTTCTCTCCTTCTCCATCCTTCTCAAGCCCGCTACTCGT
TATCGTCGTCCTCCTCGACAAGCGGACCTTCCATTTGGGGCGCCATCCTA
GACGAAGAGCCTTACCTACCCTTTGTAGGAAGTGGGATAAAACCTTCCTG
CAGAAGTTCAAGCTCGGATGCCTCGGGCATGGTTACCGACTCTTGGTTGT
CCTCCCTCGAGGCGTCGCTTCCGACGCACCGCCCTCAAGCTTACAAATGG
GGGCCCGAGATGGTGGAGGACAACGGCGGCACGGTCCTAGCATTGGCCGG
GTCCGATTATTGCATTATCGGGGCAGATACGCGGTTGAGCTCCGATTATC
GGATTCGGACGCGGAATGTGAGTCGGCTGATGGAGGTGTCGTCGCACACG
TACATGGGCATGGCGGGGAGCTGGGCAGATTCGACGGCCTTGCGTCGCGA
GATGGCGTATGACTTGAGCTGCTTCGAAGCTAAGCATGGACGGCCGATTG
GTACGGCGGCCCTTGGCACATTCTTGTCGAATTGCCTTTATTTGCACCGC
CTGCAGCCTATGTATGCCCTCAATTTGGTCGCGGGTTTGGATGATAAAGG
CCGGGGCGCTATTTACAGCTATGACGTTATTGGCTCGTTTAATCGAGTAG
CCGCCGCGTGCTGTGGCAGGGGGCAGGAATTGATGCAGCCTGTCCTGGAT
CAGTTCACGACCGAAGATCGTAATCAGAGCGTACGACAGGGGTGTGTGCC
CTTGTCGTGTGAAGAGGCACTGAGGGTGATGAAGGACGCGTTTTTGTCCG
GGGCCGAAAGAGAGATAAGCATTGGGGATGGGGTGGAGATTGTGGTTTTG
CGAAAAGGACACCGACCTAGGGTGGAGAAATTAAAGCTACCACAGCACTG
AATGGGTTGCGCAACTGCGCGTGGTAGTGTTGTCTTCGTTGTCCTACCCC
TCGTCCTCCTCACTTCTCTCCTTCTCCATCCTTCTCAAGCCCGCTACTCG
TTATCGTCGTCCTCCTCGACAAGCGGACCTTCCATTTGGGGCGCCATCCT
AGACGAAGAGCCTTACCTACCCTTTGTAGGAAGTGGGATAAAACCTTCCT
GCAGAAGTTCAAGCTCGGATGCCTCGGGCATGGTTACCGACTCTTGGTTG
TCCTCCCTCGAGGCGTCGCTTCCGACGCACCGCCCTCAAGCTTACAAATG
GGGGCCCGAGATGGTGGAGGACAACGGCGGCACGGTCCTAGCATTGGCCG
GGTCCGATTATTGCATTATCGGGGCAGATACGCGGTTGAGCTCCGATTAT
CGGATTCGGACGCGGAATGTGAGTCGGCTGATGGAGGTGTCGTCGCACAC
GTACATGGGCATGGCGGGGAGCTGGGCAGATTCGACGGCCTTGCGTCGCG
AGATGGCGTATGACTTGAGCTGCTTCGAAGCTAAGCATGGACGGCCGATT
GGTACGGCGGCCCTTGGCACATTCTTGTCGAATTGCCTTTATTTGCACCG
CCTGCAGCCTATGTATGCCCTCAATTTGGTCGCGGGTTTGGATGATAAAG
GCCGGGGCGCTATTTACAGCTATGACGTTATTGGCTCGTTTAATCGAGTA
GCCGCCGCGTGCTGTGGCAGGGGGCAGGAATTGATGCAGCCTGTCCTGGA
TCAGTTCACGACCGAAGATCGTAATCAGAGCGTACGACAGGGGTGTGTGC
CCTTGTCGTGTGAAGAGGCACTGAGGGTGATGAAGGACGCGTTTTTGTCC
GGGGCCGAAAGAGAGATAAGCATTGGGGATGGGGTGGAGATTGTGGTTTT
GCGAAAAGGACACCGACCTAGGGTGGAGAAATTAAAGCTACCACAGCACT
GAATGGGTTGCGCAACTGCGCGTGGTAGTGTTGTCTTCGTTGTCCTACCC
CTCGTCCTCCTCACTTCTCTCCTTCTCCATCCTTCTCAAGCCCGCTACTC
GTTATCGTCGTCCTCCTCGACAAGCGGACCTTCCATTTGGGGCGCCATCC
TAGACGAAGAGCCTTACCTACCCTTTGTAGGAAGTGGGATAAAACCTTCC
TGCAGAAGTTCAAGCTCGGATGCCTCGGGCATGGTTACCGACTCTTGGTT
GTCCTCCCTCGAGGCGTCGCTTCCGACGCACCGCCCTCAAGCTTACAAAT
GGGGGCCCGAGATGGTGGAGGACAACGGCGGCACGGTCCTAGCATTGGCC
GGGTCCGATTATTGCATTATCGGGGCAGATACGCGGTTGAGCTCCGATTA
TCGGATTCGGACGCGGAATGTGAGTCGGCTGATGGAGGTGTCGTCGCACA
CGTACATGGGCATGGCGGGGAGCTGGGCAGATTCGACGGCCTTGCGTCGC
GAGATGGCGTATGACTTGAGCTGCTTCGAAGCTAAGCATGGACGGCCGAT
TGGTACGGCGGCCCTTGGCACATTCTTGTCGAATTGCCTTTATTTGCACC
GCCTGCAGCCTATGTATGCCCTCAATTTGGTCGCGGGTTTGGATGATAAA
GGCCGGGGCGCTATTTACAGCTATGACGTTATTGGCTCGTTTAATCGAGT
AGCCGCCGCGTGCTGTGGCAGGGGGCAGGAATTGATGCAGCCTGTCCTGG
ATCAGTTCACGACCGAAGATCGTAATCAGAGCGTACGACAGGGGTGTGTG
CCCTTGTCGTGTGAAGAGGCACTGAGGGTGATGAAGGACGCGTTTTTGTC
CGGGGCCGAAAGAGAGATAAGCATTGGGGATGGGGTGGAGATTGTGGTTT
TGCGAAAAGGACACCGACCTAGGGTGGAGAAATTAAAGCTACCACAGCAC
TGAATGGGTTGCGCAACTGCGCGTGGTAGTGTTGTCTTCGTTGTCCTACC
CCTCGTCCTCCTCACTTCTCTCCTTCTCCATCCTTCTCAAGCCCGCTACT
CGTTATCGTCGTCCTCCTCGACAAGCGGACCTTCCATTTGGGGCGCCATC
CTAGACGAAGAGCCTTACCTACCCTTTGTAGGAAGTGGGATAAAACCTTC
CTGCAGAAGTTCAAGCTCGGATGCCTCGGGCATGGTTACCGACTCTTGGT
TGTCCTCCCTCGAGGCGTCGCTTCCGACGCACCGCCCTCAAGCTTACAAA
TGGGGGCCCGAGATGGTGGAGGACAACGGCGGCACGGTCCTAGCATTGGC
CGGGTCCGATTATTGCATTATCGGGGCAGATACGCGGTTGAGCTCCGATT
ATCGGATTCGGACGCGGAATGTGAGTCGGCTGATGGAGGTGTCGTCGCAC
ACGTACATGGGCATGGCGGGGAGCTGGGCAGATTCGACGGCCTTGCGTCG
CGAGATGGCGTATGACTTGAGCTGCTTCGAAGCTAAGCATGGACGGCCGA
TTGGTACGGCGGCCCTTGGCACATTCTTGTCGAATTGCCTTTATTTGCAC
CGCCTGCAGCCTATGTATGCCCTCAATTTGGTCGCGGGTTTGGATGATAA
AGGCCGGGGCGCTATTTACAGCTATGACGTTATTGGCTCGTTTAATCGAG
TAGCCGCCGCGTGCTGTGGCAGGGGGCAGGAATTGATGCAGCCTGTCCTG
GATCAGTTCACGACCGAAGATCGTAATCAGAGCGTACGACAGGGGTGTGT
GCCCTTGTCGTGTGAAGAGGCACTGAGGGTGATGAAGGACGCGTTTTTGT
CCGGGGCCGAAAGAGAGATAAGCATTGGGGATGGGGTGGAGATTGTGGTT
TTGCGAAAAGGACACCGACCTAGGGTGGAGAAATTAAAGCTACCACAGCA
CTGA back to top
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