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Properties
| Property Name | Value |
|---|
| TranscriptId | 602599 |
| Track | FilteredModels2 |
| ProteinId | 602513 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_25 | supercontig | scaffold_25:177833..179257 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8108 ID=mRNA_8108|Name=jgi.p|Nanoce1779_2|602513|organism=Nannochloropsis oceanica|type=mRNA|length=1127bp
TCACGTTGCTGTGGCCCACCTGGGCGAGGGGAGATTTGGGTGTTTATGAG
AATGACCCACCCGCACGAGCAATCTGCCCCTGAGCTAGTTTGGGGGTAAA
ATCACACCATGCATGGAACCAATTGTTTATTTTTTCCGCCTGTTGCCCCA
ACACTACGCCAATTACCATGAACGAGTCGTCTTAATAATGTGTCGTTCCT
TTCTGATTTCCTCGCTTCCCTCATGCTCATGACCGCGCGACTCACGCACC
ACATCCAACCCGCGAGGGCAGAGGGGAGCTGCAGCTGTAAATCAGGCAAG
AGTTAGAGCTTAGGAGCTGGCTCCGTTCCCGCGACTGGTGCAGCCTCTCC
ATCTCCGCCTCCAGCCATTATCGTTATCAAGCCTCTCTGCATCACGAGCC
TGACGCGGGAGGCCAACCATGTTCTCCCTCCTAGCCGGCTTCCTCAAGTA
CCTCTTCTCCAAAACGGAGGTGCACATCCTCATCCTCGGCCTGGATCATG
CAGGGAAGACCACCCTCCTCGAACAGTCCAAAGGAATCTTTCGCAAAATG
CAAGGCATCCCCCCCGAGAAAATCACTCCCACCGTCGGTCTGAACGTAGG
GAAAATGGACATTGAAGGCTGTTATGTAATTTTGTGGGACCTAGGGGGAC
AGGTAAGAATGAGGTCTATCTGGGATAAGTACTATGCAGATGCCCATGGG
GTTGTTTTTGTATTGGATGCAGCAGATGTGGGGAGATTTGAGGAGGCCAA
GTTAGCTTTTGCTTCGATCCTAGAGCACGAAGATTTGGGAGATGTCCCCG
TGTTGTTGTTTGCGAATAAGCAGGACTTGCCGGGGGCGTTGTCCGAGGAA
GATGTGTCGGAAACTTTTGAAGTGGAGAAGTTACAGAGACAAAGGGTGGT
CCAGGTGCAGCCGTGTAGTGCGTTGACTTGTGATGGGATTGAGAGCGGAG
TAAGGTGGGTGGTACAGGAAGCGAAGGGGATGGCAAGGAAATTGGACTAG
ACTGTCCGGGACAGCAAGGGAAAAGGAAAACCTGAATAAATAAACAAATT
AACAAAAAGAAAGAAATGTATGATATTCAAAGACAGCCCAAAAAGGATAA
TGAAAGAAATCGCGATATCCAAGAAAA back to topprotein sequence of jgi.p|Nanoce1779_2|602513 >mRNA_8108-protein ID=mRNA_8108-protein|Name=jgi.p|Nanoce1779_2|602513|organism=Nannochloropsis oceanica|type=polypeptide|length=194bp
MFSLLAGFLKYLFSKTEVHILILGLDHAGKTTLLEQSKGIFRKMQGIPPE
KITPTVGLNVGKMDIEGCYVILWDLGGQVRMRSIWDKYYADAHGVVFVLD
AADVGRFEEAKLAFASILEHEDLGDVPVLLFANKQDLPGALSEEDVSETF
EVEKLQRQRVVQVQPCSALTCDGIESGVRWVVQEAKGMARKLD* back to topmRNA from alignment at scaffold_25:177833..179257- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8108 ID=mRNA_8108|Name=jgi.p|Nanoce1779_2|602513|organism=Nannochloropsis oceanica|type=mRNA|length=1425bp|location=Sequence derived from alignment at scaffold_25:177833..179257- (Nannochloropsis oceanica)
TCACGTTGCTGTGGCCCACCTGGGCGAGGGGAGATTTGGGTGTTTATGAG
AATGACCCACCCGCACGAGCAATCTGCCCCTGAGCTAGTTTGGGGGTAAA
ATCACACCATGCATGGAACCAATTGTTTATTTTTTCCGCCTGTTGCCCCA
ACACTACGCCAATTACCATGAACGAGTCGTCTTAATAATGTGTCGTTCCT
TTCTGATTTCCTCGCTTCCCTCATGCTCATGACCGCGCGACTCACGCACC
ACATCCAACCCGCGAGGGCAGAGGGGAGCTGCAGCTGTAAATCAGGCAAG
AGTTAGAGCTTAGGAGCTGGCTCCGTTCCCGCGACTGGTGCAGCCTCTCC
ATCTCCGCCTCCAGCCATTATCGTTATCAAGCCTCTCTGCATCACGAGCC
TGACGCGGGAGGCCAACCATGGTAAGTCTTAGCGCATAGGAGGGTGATTG
CCCCTTGCAACGTCATTATGTGATATGGAGGGACCAGATGCTTCTCTAGG
GAACAATAAGGGTGGACTTTACTCCGTCTCCACTTATCAACCCCTCCGTC
TCCTCCTCCCCTTCATGCTCCATCCCATCTCTCCATGCGGCCATCCATCC
AGTTCTTGCGAGTTCTGCTTGAAAAGTCACGTCTTTGCCAGTACAACTAG
AGCTCACCTTTTCACGGCCTCTCTTTATCCCCCGCTTACGTACGCTATCC
TTTCCTTTTCCCCACACAGTTCTCCCTCCTAGCCGGCTTCCTCAAGTACC
TCTTCTCCAAAACGGAGGTGCACATCCTCATCCTCGGCCTGGATCATGCA
GGGAAGACCACCCTCCTCGAACAGTCCAAAGGAATCTTTCGCAAAATGCA
AGGCATCCCCCCCGAGAAAATCACTCCCACCGTCGGTCTGAACGTAGGGA
AAATGGACATTGAAGGCTGTTATGTAATTTTGTGGGACCTAGGGGGACAG
GTAAGAATGAGGTCTATCTGGGATAAGTACTATGCAGATGCCCATGGGGT
TGTTTTTGTATTGGATGCAGCAGATGTGGGGAGATTTGAGGAGGCCAAGT
TAGCTTTTGCTTCGATCCTAGAGCACGAAGATTTGGGAGATGTCCCCGTG
TTGTTGTTTGCGAATAAGCAGGACTTGCCGGGGGCGTTGTCCGAGGAAGA
TGTGTCGGAAACTTTTGAAGTGGAGAAGTTACAGAGACAAAGGGTGGTCC
AGGTGCAGCCGTGTAGTGCGTTGACTTGTGATGGGATTGAGAGCGGAGTA
AGGTGGGTGGTACAGGAAGCGAAGGGGATGGCAAGGAAATTGGACTAGAC
TGTCCGGGACAGCAAGGGAAAAGGAAAACCTGAATAAATAAACAAATTAA
CAAAAAGAAAGAAATGTATGATATTCAAAGACAGCCCAAAAAGGATAATG
AAAGAAATCGCGATATCCAAGAAAA back to topCoding sequence (CDS) from alignment at scaffold_25:177833..179257- >mRNA_8108 ID=mRNA_8108|Name=jgi.p|Nanoce1779_2|602513|organism=Nannochloropsis oceanica|type=CDS|length=1164bp|location=Sequence derived from alignment at scaffold_25:177833..179257- (Nannochloropsis oceanica)
TTCTCCCTCCTAGCCGGCTTCCTCAAGTACCTCTTCTCCAAAACGGAGGT
GCACATCCTCATCCTCGGCCTGGATCATGCAGGGAAGACCACCCTCCTCG
AACAGTCCAAAGGAATCTTTCGCAAAATGCAAGGCATCCCCCCCGAGAAA
ATCACTCCCACCGTCGGTCTGAACGTAGGGAAAATGGACATTGAAGGCTG
TTATGTAATTTTGTGGGACCTAGGGGGACAGGTAAGAATGAGGTCTATCT
GGGATAAGTACTATGCAGATGCCCATGGGGTTGTTTTTGTATTGGATGCA
GCAGATGTGGGGAGATTTGAGGAGGCCAAGTTAGCTTTTGCTTCGATCCT
AGAGCACGAAGATTTGGGAGATGTCCCCGTGTTGTTGTTTGCGAATAAGC
AGGACTTGCCGGGGGCGTTGTCCGAGGAAGATGTGTCGGAAACTTTTGAA
GTGGAGAAGTTACAGAGACAAAGGGTGGTCCAGGTGCAGCCGTGTAGTGC
GTTGACTTGTGATGGGATTGAGAGCGGAGTAAGGTGGGTGGTACAGGAAG
CGAAGGGGATGGCAAGGAAATTGGACTAGATGTTCTCCCTCCTAGCCGGC
TTCCTCAAGTACCTCTTCTCCAAAACGGAGGTGCACATCCTCATCCTCGG
CCTGGATCATGCAGGGAAGACCACCCTCCTCGAACAGTCCAAAGGAATCT
TTCGCAAAATGCAAGGCATCCCCCCCGAGAAAATCACTCCCACCGTCGGT
CTGAACGTAGGGAAAATGGACATTGAAGGCTGTTATGTAATTTTGTGGGA
CCTAGGGGGACAGGTAAGAATGAGGTCTATCTGGGATAAGTACTATGCAG
ATGCCCATGGGGTTGTTTTTGTATTGGATGCAGCAGATGTGGGGAGATTT
GAGGAGGCCAAGTTAGCTTTTGCTTCGATCCTAGAGCACGAAGATTTGGG
AGATGTCCCCGTGTTGTTGTTTGCGAATAAGCAGGACTTGCCGGGGGCGT
TGTCCGAGGAAGATGTGTCGGAAACTTTTGAAGTGGAGAAGTTACAGAGA
CAAAGGGTGGTCCAGGTGCAGCCGTGTAGTGCGTTGACTTGTGATGGGAT
TGAGAGCGGAGTAAGGTGGGTGGTACAGGAAGCGAAGGGGATGGCAAGGA
AATTGGACTAGATG back to top
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