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Properties
| Property Name | Value |
|---|
| TranscriptId | 602536 |
| Track | FilteredModels2 |
| ProteinId | 602450 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_25 | supercontig | scaffold_25:126373..127834 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8091 ID=mRNA_8091|Name=jgi.p|Nanoce1779_2|602450|organism=Nannochloropsis oceanica|type=mRNA|length=1462bp
CATAGATGGCACTGGCAGTAGTAGTAGCATCGGTAGACCGGCTGGAGGAG
AAGGAGGACCGGGAAGCTTGCAGCGCAGCAGCAGCAGCAGCAGCAGCAGC
AGTCCCAATCTCCTTCAATTCAAACCGGCCCGTGAATGTCACTCGGAAGA
GGTCCATCGTTCCTTTTCCCTCCTTCCCATGGGGCCTGCTCAACGCCGCC
TTCTCTCCACCCCTTTCAAGGCCAAGCGTAAAGTGAGCAAGGTCCCGTTC
AAGGTGCTCGACGCCCCTGCACTGCAAGATGATTTTTATCTCAACCTCGT
TGACTGGTCGTCGCTTAATGTCCTCGCCGTCGGCCTGGGTACATGTGTCT
ATCTCTGGAGTGCTTGTACAAGCTCTGTTACGAAACTCTGCGATCTAGGA
GAGGATGATTCCGTGACATCCGTCGCGTGGACGCAGCGAGGAACGCACTT
GGCAGTAGGCACCAATACGGGAGAGGTCCAAATGTGGGATGTTGGGAGAT
GTCAGCGGATTAGGAGCTTGTCCGGTCATTCCGCAAGGATAGGAACCATG
TCGTGGAATGGCCAAGTGCTGGCAAGCGGGAGTCGCGATCGCTTGATTTA
TTTGAGGGATGTCCGAGCACGGGAACCAAGAGTGAAGAAATTGCAGGGGC
ATAGACAGGAAGTATGTGGGTTGAGATGGTCATTTGACGACTGCCAGCTT
GCTTCCGGGGGAAATGACAACAAGCTTTATATATGGACTTTGCATTCTTC
CCAGCCTGTGCAGAAGTTCACGGAGCACACAGCAGCGGTAAAGGCTTTGG
CATGGTCTCCGCATCAGGGGGGGTTGCTTGCGAGTGGGGGCGGAACGGCG
GATAGACATATAAGGTTTTGGAATACCTTAACTGGGGCATCTCTAAGTCG
GGTGGACACTGGCTCGCAGGTATGTAATTTGATGTGGAGCAAAAATGTGA
ACGAGATTGTGAGTACGCATGGGTACAGTTTGAATCAGATTATTTTGTGG
CGGTACCCGAGTATGACGAAGGTGACCACTTTGACGGGGCATACTTTTCG
AGTGCTGTACCTGGCGATTTCTCCCGATGGACAGACGATTGTGACAGGTG
CGGGGGATGAAACGTTGAGGTTTTGGAATGTGTTTCCTGGGGCGAAGAGC
AGGGGGGGGGAGGGGTCGAGGTTGGGAACGAATTTTTTGTTTCCTGTGGG
GCATGACATTCGGTAGAGCTGGACAGGGGTAGAAGAAGCAGGAGGTGGTG
GAAGAAGCGTGGGAGGGGCGTTGATTGGAGAAGAGGAAGGGAAGGAAAAT
GACACATGCAAATTATTCGCAAGCGAGTTTTTACCGTTACGCTTGTGAAG
TGAGGCAACCAGGAACTGGTCATGCTGGCTCGCTGCTTGCTTATGCGTTG
TTTGCCTGTGCACTTTAGCTCTTTTTCAAACCACAGGTGCACGCACGCGC
CTCATCCATCAT back to topprotein sequence of jgi.p|Nanoce1779_2|602450 >mRNA_8091-protein ID=mRNA_8091-protein|Name=jgi.p|Nanoce1779_2|602450|organism=Nannochloropsis oceanica|type=polypeptide|length=346bp
MGPAQRRLLSTPFKAKRKVSKVPFKVLDAPALQDDFYLNLVDWSSLNVLA
VGLGTCVYLWSACTSSVTKLCDLGEDDSVTSVAWTQRGTHLAVGTNTGEV
QMWDVGRCQRIRSLSGHSARIGTMSWNGQVLASGSRDRLIYLRDVRAREP
RVKKLQGHRQEVCGLRWSFDDCQLASGGNDNKLYIWTLHSSQPVQKFTEH
TAAVKALAWSPHQGGLLASGGGTADRHIRFWNTLTGASLSRVDTGSQVCN
LMWSKNVNEIVSTHGYSLNQIILWRYPSMTKVTTLTGHTFRVLYLAISPD
GQTIVTGAGDETLRFWNVFPGAKSRGGEGSRLGTNFLFPVGHDIR* back to topmRNA from alignment at scaffold_25:126373..127834- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8091 ID=mRNA_8091|Name=jgi.p|Nanoce1779_2|602450|organism=Nannochloropsis oceanica|type=mRNA|length=1462bp|location=Sequence derived from alignment at scaffold_25:126373..127834- (Nannochloropsis oceanica)
CATAGATGGCACTGGCAGTAGTAGTAGCATCGGTAGACCGGCTGGAGGAG
AAGGAGGACCGGGAAGCTTGCAGCGCAGCAGCAGCAGCAGCAGCAGCAGC
AGTCCCAATCTCCTTCAATTCAAACCGGCCCGTGAATGTCACTCGGAAGA
GGTCCATCGTTCCTTTTCCCTCCTTCCCATGGGGCCTGCTCAACGCCGCC
TTCTCTCCACCCCTTTCAAGGCCAAGCGTAAAGTGAGCAAGGTCCCGTTC
AAGGTGCTCGACGCCCCTGCACTGCAAGATGATTTTTATCTCAACCTCGT
TGACTGGTCGTCGCTTAATGTCCTCGCCGTCGGCCTGGGTACATGTGTCT
ATCTCTGGAGTGCTTGTACAAGCTCTGTTACGAAACTCTGCGATCTAGGA
GAGGATGATTCCGTGACATCCGTCGCGTGGACGCAGCGAGGAACGCACTT
GGCAGTAGGCACCAATACGGGAGAGGTCCAAATGTGGGATGTTGGGAGAT
GTCAGCGGATTAGGAGCTTGTCCGGTCATTCCGCAAGGATAGGAACCATG
TCGTGGAATGGCCAAGTGCTGGCAAGCGGGAGTCGCGATCGCTTGATTTA
TTTGAGGGATGTCCGAGCACGGGAACCAAGAGTGAAGAAATTGCAGGGGC
ATAGACAGGAAGTATGTGGGTTGAGATGGTCATTTGACGACTGCCAGCTT
GCTTCCGGGGGAAATGACAACAAGCTTTATATATGGACTTTGCATTCTTC
CCAGCCTGTGCAGAAGTTCACGGAGCACACAGCAGCGGTAAAGGCTTTGG
CATGGTCTCCGCATCAGGGGGGGTTGCTTGCGAGTGGGGGCGGAACGGCG
GATAGACATATAAGGTTTTGGAATACCTTAACTGGGGCATCTCTAAGTCG
GGTGGACACTGGCTCGCAGGTATGTAATTTGATGTGGAGCAAAAATGTGA
ACGAGATTGTGAGTACGCATGGGTACAGTTTGAATCAGATTATTTTGTGG
CGGTACCCGAGTATGACGAAGGTGACCACTTTGACGGGGCATACTTTTCG
AGTGCTGTACCTGGCGATTTCTCCCGATGGACAGACGATTGTGACAGGTG
CGGGGGATGAAACGTTGAGGTTTTGGAATGTGTTTCCTGGGGCGAAGAGC
AGGGGGGGGGAGGGGTCGAGGTTGGGAACGAATTTTTTGTTTCCTGTGGG
GCATGACATTCGGTAGAGCTGGACAGGGGTAGAAGAAGCAGGAGGTGGTG
GAAGAAGCGTGGGAGGGGCGTTGATTGGAGAAGAGGAAGGGAAGGAAAAT
GACACATGCAAATTATTCGCAAGCGAGTTTTTACCGTTACGCTTGTGAAG
TGAGGCAACCAGGAACTGGTCATGCTGGCTCGCTGCTTGCTTATGCGTTG
TTTGCCTGTGCACTTTAGCTCTTTTTCAAACCACAGGTGCACGCACGCGC
CTCATCCATCAT back to topCoding sequence (CDS) from alignment at scaffold_25:126373..127834- >mRNA_8091 ID=mRNA_8091|Name=jgi.p|Nanoce1779_2|602450|organism=Nannochloropsis oceanica|type=CDS|length=1038bp|location=Sequence derived from alignment at scaffold_25:126373..127834- (Nannochloropsis oceanica)
ATGGGGCCTGCTCAACGCCGCCTTCTCTCCACCCCTTTCAAGGCCAAGCG
TAAAGTGAGCAAGGTCCCGTTCAAGGTGCTCGACGCCCCTGCACTGCAAG
ATGATTTTTATCTCAACCTCGTTGACTGGTCGTCGCTTAATGTCCTCGCC
GTCGGCCTGGGTACATGTGTCTATCTCTGGAGTGCTTGTACAAGCTCTGT
TACGAAACTCTGCGATCTAGGAGAGGATGATTCCGTGACATCCGTCGCGT
GGACGCAGCGAGGAACGCACTTGGCAGTAGGCACCAATACGGGAGAGGTC
CAAATGTGGGATGTTGGGAGATGTCAGCGGATTAGGAGCTTGTCCGGTCA
TTCCGCAAGGATAGGAACCATGTCGTGGAATGGCCAAGTGCTGGCAAGCG
GGAGTCGCGATCGCTTGATTTATTTGAGGGATGTCCGAGCACGGGAACCA
AGAGTGAAGAAATTGCAGGGGCATAGACAGGAAGTATGTGGGTTGAGATG
GTCATTTGACGACTGCCAGCTTGCTTCCGGGGGAAATGACAACAAGCTTT
ATATATGGACTTTGCATTCTTCCCAGCCTGTGCAGAAGTTCACGGAGCAC
ACAGCAGCGGTAAAGGCTTTGGCATGGTCTCCGCATCAGGGGGGGTTGCT
TGCGAGTGGGGGCGGAACGGCGGATAGACATATAAGGTTTTGGAATACCT
TAACTGGGGCATCTCTAAGTCGGGTGGACACTGGCTCGCAGGTATGTAAT
TTGATGTGGAGCAAAAATGTGAACGAGATTGTGAGTACGCATGGGTACAG
TTTGAATCAGATTATTTTGTGGCGGTACCCGAGTATGACGAAGGTGACCA
CTTTGACGGGGCATACTTTTCGAGTGCTGTACCTGGCGATTTCTCCCGAT
GGACAGACGATTGTGACAGGTGCGGGGGATGAAACGTTGAGGTTTTGGAA
TGTGTTTCCTGGGGCGAAGAGCAGGGGGGGGGAGGGGTCGAGGTTGGGAA
CGAATTTTTTGTTTCCTGTGGGGCATGACATTCGGTAG back to top
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