jgi.p|Nanoce1779_2|574211, mRNA_808 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|574211
Unique Name	mRNA_808
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	5664
Alignment location	scaffold_2:474759..480767 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	574297
Track	FilteredModels2
ProteinId	574211

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_2	supercontig	scaffold_2:474759..480767 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|574211	gene_808	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|574211	mRNA_808-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_808	CDS_808	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_2:474759..480767-
coding sequence from alignment at scaffold_2:474759..480767-

mRNA sequence

>mRNA_808 ID=mRNA_808|Name=jgi.p|Nanoce1779_2|574211|organism=Nannochloropsis oceanica|type=mRNA|length=5664bp
GTGAGAAATATGAAATTCGAGCTTTTGTTCTTTTTCCTGATGGTGGGTGT
GGTTGTTGCTCAACTACGCCTTTGAGTGTTCTGCGCAAAAGTGTTGACAA
TACAGTCTTCTCCTCTTAATCATTCAGTGTACGCACAAGCTCCTTGCCGT
CTTTGGATAAGGCAACCTCACTTTTTGGGCCACTGTCGTCTCCTGCACTC
GCCTTCCCCTTCAACTATCACACAGGGAGAAGGATGTTCGTCCAGGACAC
AGCAAACTAGGCTCCGAAGCCAACGCACGACCACCCAACGCAGGCCTATC
ATGCTTCAATGCCTTGTGTGCACGTCTGCTATGCCAAGGGCGAGGCGCAT
ATGCGTTCCCCGCCCCCTGGCCCGTCCACCACGACTCATGCTGCAACATA
AATGAAACCCCCCCAGTGTCGAAGAACAACCACAAGTAACCACTGCCACG
CGCACAACGCCCATTCATTGTCCACACGCTCTAACCCTTGCCTCCTGCAC
ACTTTACCAGAGTGAGCTACGGGAAATCACTTTTGTAACAGACTTGCACT
TTTTAATTGAATGAGCAGCTACCAGCACAACAGCAACCACCAGCACGAGG
AACCACCATTGGACCAAACCACTTAACACCTCCGTGCTTCCTGCAAAGCT
TCAAAAAGAAGTACAAAACATGTGCCTCTTGCACATCGCCATCGATATCC
ACCTTGTGCTTACGCTCAAGTGTGTGTTTAACTGGCTGTGCCACATGGAA
GCAACAACGTTCGGATACCTCGTAACGCTGCACCTGCTCCTAGGCCTGTC
GATACCCATCAACTTTCTGCTTTGGTGCAGTTCGCTGCAAAGTGCATGAC
TTCTCGCCATACCTGTGCCTTGTTGCTGCATCTGGGCTTAAAACCCTGCC
CTTTGAACAAGCCGTACTGAACACGAACTCTACTGTAACCAACCTCTCGC
CCACTCATCCTCATCTTCTCTCTACACCCTTCCGTCTCGTCAAAGCAACC
CAACCACAGTCAATCGCCATTAAGACATGAGTGCCATTAAGAGTCTCAAC
GTTCTGACCAGCAACGGCATCGGTGCTCCAACCCGCGCCGCGGATATTGT
CGAGATGGAAAGCCTCATGTCGCTTGACCAGCCCTTCGAGTCCAAGATCA
TGCCCCGTTGGGAGCGCAAGAAGCTGCAGAAGCTGGCTTCTTCCTCAGGT
GGTGGCCTGGACGGAGACAAGGCCGGGAGTCATGACCGTTTTATTCCCAA
CCGCTCGGCGATGCACATGGAGAAGGCCCATTATGTCCTTTCCAAGGAGA
ACGAAAGCTCCAATCCGCAAGGCGACAGTGACAACAGCAACAACAAGGAC
GGACCCGATTTGCCCTCCTCTACTGCTGGCGCGGGCAGTATCGAGGAAGA
CGAGGTCTGCTCCTCTACCGGTAGCGTCACCACAAAAGAAGCCGCTTCCG
TCCAGAAGAAGGAATACCATCAAGCCCTGGAGGCCCAGCTCCTCGACGGC
AAGAAGGACCATCGAGTCCTAGCTTTCAGGAACAAAGCCCCCCTTCCCAA
GGAGGGCTTCCAAAATCAACTTCAAGTCCTCTACAGCCAGAACAAGGGGC
CGGCTCCCAGCAGCTTGCGGAGTTACCGTCACATCCCCTCGGCTCCCGAG
CGCATCCTTGACGCCCCGGATTTGTTGGATGATTACTATTTGAATATCAT
GGACTGGGGCGCGAGCAACATTCTGGCGATTGCTTTGTCGCAGACCTTGT
ATTTGTGGAATGCCGTTACGGGGGATATTACTGAGCTGATGTCAGTGGCG
GACGCCGATGATTACATCACGAGTGTGTCGTGGATCCAAGACACCGGCTC
TCACCTTGCAATTGGCACGGCCTCGGCCCAGACTCAGCTCTGGGACGTGG
CGGGTCAGAAGCAGGTGCGATCGATGGGTGGGCATTCGGCGCGCGTGAGT
GCCTTGTCCTGGAATCGTCACATCCTGTCGTCGGGCTCCCGTGACTCGAC
TATAGTCCATCATGACGTGCGGGTGCAGCAGCACCACATCGCCACCCTAG
CTGGCCACGAGCAAGAGGTGTGTGGCCTGTCCTGGTCCCCTGATGGCTCT
TTGTTGGCATCGGGGGGGAATGACAATTTGTTGTGCCTTTGGGATAATGC
CTCCATCTCCGCCGGTGGTGGCAGCCGGGCGCCACAGACCGTGGCGCCTC
GTTACAAGCTGGCCGAGCACCAGGCGGCCGTCAAGGCCTTGGCTTGGTGT
CCATTCGAGCGTAACATCTTGGCGACGGGCGGGGGGACAGCGGACAGATG
CATCAAATTTTGGAATGGCGGCAATGGCGCCTTGCTGAACTCGATTGACA
CCGGCTCGCAGGTCTGTTCCCTGCTCTGGAGCAAGCACGAGAAGGAGCTC
CTGTCTTCCCATGGCTTCTCGCAGAATCAGCTATGCTTGTGGAAGTATCC
CAGCATGGTCAAGGTGAAAGAGCTGACTGGTCATACATCCCGTGTGCTGC
ATCTGGCGCAATCCCCGGATGGGAACTCGGTGGTCTCGGCTGCACCTGAC
GAGACGATTCGCTTCTGGAATGTCTTCGGGAGTGCCGCGGGCGGGAAGAA
GAAGGATGGAGCCGCTGGAGCTGGGCCGGTGGAACAGAAGCTGTCGCGGG
CGATGCACATCAGATAAGTATGTTGTGTGTGTCTGTTGTCGTTCACGTTC
AAAGAGGGGAGCCCTTGTCCTTTCTCTTCGCCTCCAACCGGTTGCGCCTG
TGTAGGTAAGCTTTTTGCACCCACCACAAGTTTCCTCCTGTGTTTTGAAC
TCCCGACTCCTCTCCCCCATTTCTCCCCTGTGCGCTCTTTCTCTTTCCTC
TTCCTCTTCTATCCCCCACCTTCTACTCTCCTGTTTGTTTCGAGTGGTGA
TTGCATTGTAATGCATGAACTCCCCTCCCCCCCCTCTTCCAAAAAACACA
CCTTGTGTGCGTGCCCGGTTGGGCTTCGTGCCCGGCACACCAACCTTTTT
CCTGTGTAAGAGATTCAATCCTCGCCTCATTCAACTTGCTCAACTATAAT
TGTAAAAGCTTTGTGAAGCCTATTCGTCGATTGTTGCTTTTTGTCTTGTC
TCTTTTACTTGCGCTTTTGCTTGGGGAGAGATGCCGGGACAAAGAACATA
GGGAAGACAAGCCGGTGCAGGAAACAAGCAGCAAACAGGGATGGTGGAGC
AGCAGCAATGGGGGCGATCAGCACCGGCAACGAGCACCGGATACGGGGAT
AGAATTGTGAAGGGGTCGGGCCAGGTCAGAGGAGCCTTGGAAAAGGGAAA
ATAGGAAATCAGCACTCACGGAGACCAGGCATCGCGCCAACTTGCAGGAC
AAGTATGACTGCGTGAGAGGGGACAGGGATGAAAATATCCGATTTATAGA
AAATATAAAACGAAACGGATCTCAAACAATAAGAGAGAGGGGGTTTCCCA
ATTCCACACCAGCCATTTATTATTGTACATTATTTTCTAGTGAGGAGGTT
GTCGACATAAGTAATGGCCTTGCTCTACCATTTTGCGGGCAGACAGTCAA
AACACATATTGTCAGATATGTGAGTGAACAGATTGCGGTTATATGTCGGC
AGTTTCTTAAAAAAAAATCGTGGGGGGTATAATAGAATGGGCCGCTGGGC
CGTTGGGGTGTGAAGCCGGCCGAATCGGATGCACCAAGATTTCGCTATTT
AATATGCTGTTGTGAACCTTGTTGGCCTACTCCACTAACATGCCGTCATT
AAAATATTCTGTTTCAACCTTCTTGCACAGTCGTTCTGGAGTGCCGGGCC
TGCCACGCATTTCCCCCCCCCTTTTTCAACTCTCCCGACGTAGGGATCCC
CTGCTCGATTACTTGGACATAATGGAGCAACACTACCGATATCACTTACA
CCGCGCGTGTCTGTGGCTCCAGACACGTTCGTCCTGTAAAGATTACCAGT
CATGGCAGTGTCGCTTGCCTTGGTGGTGCTGGAGGGTAATGATGCTTTTA
AAGCGTGCCCTTATGATGTCTGGCCGCTTTGCTCGCACACAACAGCACGC
ATGCTCACTCATTTTTCCACCACATGAACACCACGATGCACAGGCGCACC
ACGGTAGACTACGCCAAAGTAACCACACGCCATGAGGGTGCGCCTAACGC
CACATTTGGCATTGCTTCTTTCCTCTATGCTGCCTTTGTGCCATACCTTG
CCATACTGCATTTCCCGCTGCTCAGTGCAAGGCTATCAACGAGGATGGTA
ATGATGAGTCGCTCAAATTCAAATAGTACACGCCCCGTGAAACCGTGTAG
TAGGAGTTGTTACGGCGCTCCGTGGCAGAGGTGAGGCGCGTTTCAAAATT
TGAGGAGTTGGGATTTGAGATCAAGGGCGAGGACGTGAAGGAGCGCGTGG
GGAAGCACTCAATCAAAAGCACCATCCAACCGGATGAAGCATCCTTTTTG
CTTTACTACGTGATAACTCCAGTAAATTAATGCATGGCTCCCAAAAACGT
GCCTTGGCGGCATCAGTGCCATGAGTCGGCTCGCTGCGAAGACACGGAGG
AAAGCTACCATTACGTTTGCCCATCGGGGTTTGAAGGAGAGCAAGGGACA
GGTCAAGGCCGCTGCACCGGAGCCATTTCCACGCAGTCCTGCTGTGGTAT
CGTGGGTAGAGATGCCTGTAAACATAGCTTTATATGCACCCATTCAACAC
CGATTGGGAAGAACGACAATTGCAAAGGCCAGTGTGTGGAGAACACCAAC
TGTACCCTTATCTCCCAGGAGCTTGATTTGTATGGCTACGTTTGCCCAGA
CGGGTACTTCGGGACTGCGCGGCATTGTCCCCGGGGTCGTGAGCCTCCGC
CTACTTTCTTTGACGAGGCTGGAAATTTGTTGGGGAAGATGCAGGCGGAT
GAATATTGTGGGTGTCAACCCAAGGTCACGGATTGGTGCATGGGCAAAGA
TTGTGGGGAACACGCCGTGTGTCAAAATGCAGCCAACTCCCACCGCTGCG
TGTGCGATGCAGGCTACGTAGAAGAACAGGGTTGATGTGTGGATAAGGCG
GGTGTGCCGTTGTTGTTGGAAGGCCCGGAGGTAGTGACGGTGGTGCAGGG
GGACGCTTACGAAGATCGCTTAGTCCGCATCATGGACACTAATGAGATGT
TAGCCGAGCCAAGGTACATCTCTATCTCCTACGACTCCCCCAGCTTGAAT
GCCGATACCCTCGACGATGTTGGTACCTATTTCATTAGCTACACCGTCAA
GGCCCCCTGGACCAGCACCCCCACTGTGACCATTCGCCGAACGATTGTCG
TGAAAGATTTGAACGAGTGCAGCCTCCGACCCACCGATGCGAAATGGAAC
AAATGGCGGCCACGCTGTCATAAGTGGGCGAAATGCTCCAACATCAACGG
GGATATACGTGCTCGTGCCGCCCTGGCACCATTGGAGATGGTGCAGAAGG
CAACAGCACGTGTCTCAAGGAGGAAGGGAACTTTACCCCGAGGAATGCGA
AGAACGGCACTGGCTGCGTGGATGTGAAAGCACCTGTGTTGGTGGTGCCT
TCGTTTGAGAAGACGTTTCAAACATGTAAATGTGAGGGGCTGGGAGGACC
GGGCACGCCAGCGCCTCCTGGATGTGCTGCTCGTGGCTATGGCAAGGAGC
TCAGGGAGTTGACC

protein sequence of jgi.p|Nanoce1779_2|574211

>mRNA_808-protein ID=mRNA_808-protein|Name=jgi.p|Nanoce1779_2|574211|organism=Nannochloropsis oceanica|type=polypeptide|length=547bp
MSAIKSLNVLTSNGIGAPTRAADIVEMESLMSLDQPFESKIMPRWERKKL
QKLASSSGGGLDGDKAGSHDRFIPNRSAMHMEKAHYVLSKENESSNPQGD
SDNSNNKDGPDLPSSTAGAGSIEEDEVCSSTGSVTTKEAASVQKKEYHQA
LEAQLLDGKKDHRVLAFRNKAPLPKEGFQNQLQVLYSQNKGPAPSSLRSY
RHIPSAPERILDAPDLLDDYYLNIMDWGASNILAIALSQTLYLWNAVTGD
ITELMSVADADDYITSVSWIQDTGSHLAIGTASAQTQLWDVAGQKQVRSM
GGHSARVSALSWNRHILSSGSRDSTIVHHDVRVQQHHIATLAGHEQEVCG
LSWSPDGSLLASGGNDNLLCLWDNASISAGGGSRAPQTVAPRYKLAEHQA
AVKALAWCPFERNILATGGGTADRCIKFWNGGNGALLNSIDTGSQVCSLL
WSKHEKELLSSHGFSQNQLCLWKYPSMVKVKELTGHTSRVLHLAQSPDGN
SVVSAAPDETIRFWNVFGSAAGGKKKDGAAGAGPVEQKLSRAMHIR*

mRNA from alignment at scaffold_2:474759..480767-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_808 ID=mRNA_808|Name=jgi.p|Nanoce1779_2|574211|organism=Nannochloropsis oceanica|type=mRNA|length=6009bp|location=Sequence derived from alignment at scaffold_2:474759..480767- (Nannochloropsis oceanica)
GTGAGAAATATGAAATTCGAGCTTTTGTTCTTTTTCCTGATGGTGGGTGT
GGTTGTTGCTCAACTACGCCTTTGAGTGTTCTGCGCAAAAGTGTTGACAA
TACAGTCTTCTCCTCTTAATCATTCAGTGTACGCACAAGCTCCTTGCCGT
CTTTGGATAAGGCAACCTCACTTTTTGGGCCACTGTCGTCTCCTGCACTC
GCCTTCCCCTTCAACTATCACACAGGGAGAAGGATGTTCGTCCAGGACAC
AGCAAACTAGGCTCCGAAGCCAACGCACGACCACCCAACGCAGGCCTATC
ATGCTTCAATGCCTTGTGTGCACGTCTGCTATGCCAAGGGCGAGGCGCAT
ATGCGTTCCCCGCCCCCTGGCCCGTCCACCACGACTCATGCTGCAACATA
AATGAAACCCCCCCAGTGTCGAAGAACAACCACAAGTAACCACTGCCACG
CGCACAACGCCCATTCATTGTCCACACGCTCTAACCCTTGCCTCCTGCAC
ACTTTACCAGAGTGAGCTACGGGAAATCACTTTTGTAACAGACTTGCACT
TTTTAATTGAATGAGCAGCTACCAGCACAACAGCAACCACCAGCACGAGG
AACCACCATTGGACCAAACCACTTAACACCTCCGTGCTTCCTGCAAAGCT
TCAAAAAGAAGTACAAAACATGTGCCTCTTGCACATCGCCATCGATATCC
ACCTTGTGCTTACGCTCAAGTGTGTGTTTAACTGGCTGTGCCACATGGAA
GCAACAACGTTCGGATACCTCGTAACGCTGCACCTGCTCCTAGGCCTGTC
GATACCCATCAACTTTCTGCTTTGGTGCAGTTCGCTGCAAAGTGCATGAC
TTCTCGCCATACCTGTGCCTTGTTGCTGCATCTGGGCTTAAAACCCTGCC
CTTTGAACAAGCCGTACTGAACACGAACTCTACTGTAACCAACCTCTCGC
CCACTCATCCTCATCTTCTCTCTACACCCTTCCGTCTCGTCAAAGCAACC
CAACCACAGTCAATCGCCATTAAGACATGAGTGCCATTAAGAGTCTCAAC
GTTCTGACCAGCAACGGCATCGGTGCTCCAACCCGCGCCGCGGATATTGT
CGAGATGGAAAGCCTCATGTCGCTTGACCAGCCCTTCGAGTCCAAGATCA
TGCCCCGTTGGGAGCGCAAGAAGCTGCAGAAGCTGGCTTCTTCCTCAGGT
GGTGGCCTGGACGGAGACAAGGCCGGGAGTCATGACCGTTTTATTCCCAA
CCGCTCGGCGATGCACATGGAGAAGGCCCATTATGTCCTTTCCAAGGAGA
ACGAAAGCTCCAATCCGCAAGGCGACAGTGACAACAGCAACAACAAGGAC
GGACCCGATTTGCCCTCCTCTACTGCTGGCGCGGGCAGTATCGAGGAAGA
CGAGGTCTGCTCCTCTACCGGTAGCGTCACCACAAAAGAAGCCGCTTCCG
TCCAGAAGAAGGAATACCATCAAGCCCTGGAGGCCCAGCTCCTCGACGGC
AAGAAGGACCATCGAGTCCTAGCTTTCAGGAACAAAGCCCCCCTTCCCAA
GGAGGGCTTCCAAAATCAACTTCAAGTCCTCTACAGCCAGAACAAGGGGC
CGGCTCCCAGCAGCTTGCGGAGTTACCGTCACATCCCCTCGGCTCCCGAG
CGCATCCTTGACGCCCCGGATTTGTTGGATGATTACTATTTGAATATCAT
GGACTGGGGCGCGAGCAACATTCTGGCGATTGCTTTGTCGCAGACCTTGT
ATTTGTGGAATGCCGTTACGGGGGATATTACTGAGCTGATGTCAGTGGCG
GACGCCGATGATTACATCACGAGTGTGTCGTGGATCCAAGACACCGGCTC
TCACCTTGCAATTGGCACGGCCTCGGCCCAGACTCAGCTCTGGGACGTGG
CGGGTCAGAAGCAGGTGCGATCGATGGGTGGGCATTCGGCGCGCGTGAGT
GCCTTGTCCTGGAATCGTCACATCCTGTCGTCGGGCTCCCGTGACTCGAC
TATAGTCCATCATGACGTGCGGGTGCAGCAGCACCACATCGCCACCCTAG
CTGGCCACGAGCAAGAGGTGTGTGGCCTGTCCTGGTCCCCTGATGGCTCT
TTGTTGGCATCGGGGGGGAATGACAATTTGTTGTGCCTTTGGGATAATGC
CTCCATCTCCGCCGGTGGTGGCAGCCGGGCGCCACAGACCGTGGCGCCTC
GTTACAAGCTGGCCGAGCACCAGGCGGCCGTCAAGGCCTTGGCTTGGTGT
CCATTCGAGCGTAACATCTTGGCGACGGGCGGGGGGACAGCGGACAGATG
CATCAAATTTTGGAATGGCGGCAATGGCGCCTTGCTGAACTCGATTGACA
CCGGCTCGCAGGTCTGTTCCCTGCTCTGGAGCAAGCACGAGAAGGAGCTC
CTGTCTTCCCATGGCTTCTCGCAGAATCAGCTATGCTTGTGGAAGTATCC
CAGCATGGTCAAGGTGAAAGAGCTGACTGGTCATACATCCCGTGTGCTGC
ATCTGGCGCAATCCCCGGATGGGAACTCGGTGGTCTCGGCTGCACCTGAC
GAGACGATTCGCTTCTGGAATGTCTTCGGGAGTGCCGCGGGCGGGAAGAA
GAAGGATGGAGCCGCTGGAGCTGGGCCGGTGGAACAGAAGCTGTCGCGGG
CGATGCACATCAGATAAGTATGTTGTGTGTGTCTGTTGTCGTTCACGTTC
AAAGAGGGGAGCCCTTGTCCTTTCTCTTCGCCTCCAACCGGTTGCGCCTG
TGTAGGTAAGCTTTTTGCACCCACCACAAGTTTCCTCCTGTGTTTTGAAC
TCCCGACTCCTCTCCCCCATTTCTCCCCTGTGCGCTCTTTCTCTTTCCTC
TTCCTCTTCTATCCCCCACCTTCTACTCTCCTGTTTGTTTCGAGTGGTGA
TTGCATTGTAATGCATGAACTCCCCTCCCCCCCCTCTTCCAAAAAACACA
CCTTGTGTGCGTGCCCGGTTGGGCTTCGTGCCCGGCACACCAACCTTTTT
CCTGTGTAAGAGATTCAATCCTCGCCTCATTCAACTTGCTCAACTATAAT
TGTAAAAGCTTTGTGAAGCCTATTCGTCGATTGTTGCTTTTTGTCTTGTC
TCTTTTACTTGCGCTTTTGCTTGGGGAGAGATGCCGGGACAAAGAACATA
GGGAAGACAAGCCGGTGCAGGAAACAAGCAGCAAACAGGGATGGTGGAGC
AGCAGCAATGGGGGCGATCAGCACCGGCAACGAGCACCGGATACGGGGAT
AGAATTGTGAAGGGGTCGGGCCAGGTCAGAGGAGCCTTGGAAAAGGGAAA
ATAGGAAATCAGCACTCACGGAGACCAGGCATCGCGCCAACTTGCAGGAC
AAGTATGACTGCGTGAGAGGGGACAGGGATGAAAATATCCGATTTATAGA
AAATATAAAACGAAACGGATCTCAAACAATAAGAGAGAGGGGGTTTCCCA
ATTCCACACCAGCCATTTATTATTGTACATTATTTTCTAGTGAGGAGGTT
GTCGACATAAGTAATGGCCTTGCTCTACCATTTTGCGGGCAGACAGTCAA
AACACATATTGTCAGATATGTGAGTGAACAGATTGCGGTTATATGTCGGC
AGTTTCTTAAAAAAAAATCGTGGGGGGTATAATAGAATGGGCCGCTGGGC
CGTTGGGGTGTGAAGCCGGCCGAATCGGATGCACCAAGATTTCGCTATTT
AATATGCTGTTGTGAACCTTGTTGGCCTACTCCACTAACATGCCGTCATT
AAAATATTCTGTTTCAACCTTCTTGCACAGTCGTTCTGGAGTGCCGGGCC
TGCCACGCATTTCCCCCCCCCTTTTTCAACTCTCCCGACGTAGGGATCCC
CTGCTCGATTACTTGGACATAATGGAGCAACACTACCGATATCACTTACA
CCGCGCGTGTCTGTGGCTCCAGACACGTTCGTCCTGTAAAGATTACCAGT
CATGGCAGTGTCGCTTGCCTTGGTGGTGCTGGAGGGTAATGATGCTTTTA
AAGCGTGCCCTTATGATGTCTGGCCGCTTTGCTCGCACACAACAGCACGC
ATGCTCACTCATTTTTCCACCACATGAACACCACGATGCACAGGCGCACC
ACGGTAGACTACGCCAAAGTAACCACACGCCATGAGGGTGCGCCTAACGC
CACATTTGGCATTGCTTCTTTCCTCTATGCTGCCTTTGTGCCATACCTTG
CCATACTGCATTTCCCGCTGCTCAGTGCAAGGCTATCAACGAGGATGGTA
ATGATGAGTCGCTCAAATTCAAATAGTACACGCCCCGTGAAACCGTGTAG
TAGGAGTTGTTACGGCGCTCCGTGGCAGAGGTGAGGCGCGTTTCAAAATT
TGAGGAGTTGGGATTTGAGATCAAGGGCGAGGACGTGAAGGAGCGCGTGG
GGAAGCACTCAATCAAAAGCACCATCCAACCGGATGAAGCATCCTTTTTG
CTTTACTACGTGATAACTCCAGTAAATTAATGCATGGCTCCCAAAAACGT
GCCTTGGCGGCATCAGTGCCATGAGTCGGCTCGCTGCGAAGACACGGAGG
AAAGCTACCATTACGTTTGCCCATCGGGGTTTGAAGGAGAGCAAGGGACA
GGTCAAGGCCGCTGCACCGGAGCCATTTCCACGCAGTCCTGCTGTGGTAT
CGTGGGTAGAGATGCCTGTAAACATAGCTTTATATGCACCCATTCAACAC
CGATTGGGAAGAACGACAATTGCAAAGGCCAGTGTGTGGAGAACACCAAC
TGTACCCTTATCTCCCAGGAGCTTGATTTGTATGGCTACGTTTGCCCAGA
CGGGTACTTCGGGACTGCGCGGCATTGTCCCCGGGGTCGTGAGCCTCCGC
CTACTTTCTTTGACGAGGCTGGAAATTTGTTGGGGAAGATGCAGGCGGAT
GAATATTGTGGGTGTCAACCCAAGGTAAGCAGAAGAGGAGGGAGGATGTC
ACTGCCCTGCTTGCTTGATTCAATCCTGTAATTTTTTCATGTAAGGCAGT
TTTCTTGTATTATGACGCGTCGTCTCCTTGAATTTCACGACACTTACTGC
ATTCCTCCCTCCCTCCCCTTTACTTCCTCCCTTGCCCTCCTGACAGGTCA
CGGATTGGTGCATGGGCAAAGATTGTGGGGAACACGCCGTGTGTCAAAAT
GCAGCCAACTCCCACCGCTGCGTGTGCGATGCAGGCTACGTAGAAGAACA
GGGTTGATGTGTGGATAAGGCGGGTGTGCCGTTGTTGTTGGAAGGCCCGG
AGGTAGTGACGGTGGTGCAGGGGGACGCTTACGAAGATCGCTTAGTCCGC
ATCATGGACACTAATGAGATGTTAGCCGAGCCAAGGTACGTGAGGTGTAA
AAAAAAGGCGAAAGAATTGTTAATGCTTGGAAATCCCATTCCTTGCAGTA
GACCCAGTAGCTGCAGCAGTTGCAGCGGCAAGAACATCATTATCACCTTT
CACCCCCCTCCCTCCCACCCTCCCTCCCTCCCTCCCTCCTCCCTCCTCCT
GCCGTTAGGTACATCTCTATCTCCTACGACTCCCCCAGCTTGAATGCCGA
TACCCTCGACGATGTTGGTACCTATTTCATTAGCTACACCGTCAAGGCCC
CCTGGACCAGCACCCCCACTGTGACCATTCGCCGAACGATTGTCGTGAAA
GATTTGAACGAGTGCAGCCTCCGACCCACCGATGCGAAATGGAACAAATG
GCGGCCACGCTGTCATAAGTGGGCGAAATGCTCCAACATCAACGGGGATA
TACGTGCTCGTGCCGCCCTGGCACCATTGGAGATGGTGCAGAAGGCAACA
GCACGTGTCTCAAGGAGGAAGGGAACTTTACCCCGAGGAATGCGAAGAAC
GGCACTGGCTGCGTGGATGTGAAAGCACCTGTGTTGGTGGTGCCTTCGTT
TGAGAAGACGTTTCAAACATGTAAATGTGAGGGGCTGGGAGGACCGGGCA
CGCCAGCGCCTCCTGGATGTGCTGCTCGTGGCTATGGCAAGGAGCTCAGG
GAGTTGACC

Coding sequence (CDS) from alignment at scaffold_2:474759..480767-

>mRNA_808 ID=mRNA_808|Name=jgi.p|Nanoce1779_2|574211|organism=Nannochloropsis oceanica|type=CDS|length=1641bp|location=Sequence derived from alignment at scaffold_2:474759..480767- (Nannochloropsis oceanica)
ATGAGTGCCATTAAGAGTCTCAACGTTCTGACCAGCAACGGCATCGGTGC
TCCAACCCGCGCCGCGGATATTGTCGAGATGGAAAGCCTCATGTCGCTTG
ACCAGCCCTTCGAGTCCAAGATCATGCCCCGTTGGGAGCGCAAGAAGCTG
CAGAAGCTGGCTTCTTCCTCAGGTGGTGGCCTGGACGGAGACAAGGCCGG
GAGTCATGACCGTTTTATTCCCAACCGCTCGGCGATGCACATGGAGAAGG
CCCATTATGTCCTTTCCAAGGAGAACGAAAGCTCCAATCCGCAAGGCGAC
AGTGACAACAGCAACAACAAGGACGGACCCGATTTGCCCTCCTCTACTGC
TGGCGCGGGCAGTATCGAGGAAGACGAGGTCTGCTCCTCTACCGGTAGCG
TCACCACAAAAGAAGCCGCTTCCGTCCAGAAGAAGGAATACCATCAAGCC
CTGGAGGCCCAGCTCCTCGACGGCAAGAAGGACCATCGAGTCCTAGCTTT
CAGGAACAAAGCCCCCCTTCCCAAGGAGGGCTTCCAAAATCAACTTCAAG
TCCTCTACAGCCAGAACAAGGGGCCGGCTCCCAGCAGCTTGCGGAGTTAC
CGTCACATCCCCTCGGCTCCCGAGCGCATCCTTGACGCCCCGGATTTGTT
GGATGATTACTATTTGAATATCATGGACTGGGGCGCGAGCAACATTCTGG
CGATTGCTTTGTCGCAGACCTTGTATTTGTGGAATGCCGTTACGGGGGAT
ATTACTGAGCTGATGTCAGTGGCGGACGCCGATGATTACATCACGAGTGT
GTCGTGGATCCAAGACACCGGCTCTCACCTTGCAATTGGCACGGCCTCGG
CCCAGACTCAGCTCTGGGACGTGGCGGGTCAGAAGCAGGTGCGATCGATG
GGTGGGCATTCGGCGCGCGTGAGTGCCTTGTCCTGGAATCGTCACATCCT
GTCGTCGGGCTCCCGTGACTCGACTATAGTCCATCATGACGTGCGGGTGC
AGCAGCACCACATCGCCACCCTAGCTGGCCACGAGCAAGAGGTGTGTGGC
CTGTCCTGGTCCCCTGATGGCTCTTTGTTGGCATCGGGGGGGAATGACAA
TTTGTTGTGCCTTTGGGATAATGCCTCCATCTCCGCCGGTGGTGGCAGCC
GGGCGCCACAGACCGTGGCGCCTCGTTACAAGCTGGCCGAGCACCAGGCG
GCCGTCAAGGCCTTGGCTTGGTGTCCATTCGAGCGTAACATCTTGGCGAC
GGGCGGGGGGACAGCGGACAGATGCATCAAATTTTGGAATGGCGGCAATG
GCGCCTTGCTGAACTCGATTGACACCGGCTCGCAGGTCTGTTCCCTGCTC
TGGAGCAAGCACGAGAAGGAGCTCCTGTCTTCCCATGGCTTCTCGCAGAA
TCAGCTATGCTTGTGGAAGTATCCCAGCATGGTCAAGGTGAAAGAGCTGA
CTGGTCATACATCCCGTGTGCTGCATCTGGCGCAATCCCCGGATGGGAAC
TCGGTGGTCTCGGCTGCACCTGACGAGACGATTCGCTTCTGGAATGTCTT
CGGGAGTGCCGCGGGCGGGAAGAAGAAGGATGGAGCCGCTGGAGCTGGGC
CGGTGGAACAGAAGCTGTCGCGGGCGATGCACATCAGATAA

Synonyms

Publications