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Properties
| Property Name | Value |
|---|
| TranscriptId | 602496 |
| Track | FilteredModels2 |
| ProteinId | 602410 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_25 | supercontig | scaffold_25:94175..95708 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8076 ID=mRNA_8076|Name=jgi.p|Nanoce1779_2|602410|organism=Nannochloropsis oceanica|type=mRNA|length=1534bp
GAGGACGAGGACGAGGACGAGGACGAGGACGACCACCACGATGGTCTCGG
CCTTATTCCCCCCACGCACGCCCAAGTCGAATCCGAGGACGAATATCTTC
AAGACGAAAACCTCCCCTCCTCCGCCTCCTTGTTCTCCTCCTCATCGCTG
GCCCTCCCTCCCTCCCTTCTCCTCACCCCCACCGAACAATCTCGACTCGA
AAAACTGCACCACCGTCTCATCATGCTCCCTGACTCCTTGACGCATTGGG
TCGCCCCGGGAGACCTCGTCCGTTTCATCCGCACCCATGACCATCTCGAA
AACGCCTGGTCCGCCCTCAAGAAGACGTGTTATTTCCGTCGCGACCAAGG
CGTGGATCTCCTGCTCTCCCCGGGGCTCAAGGCGCACTTCGAGCACTCGG
AGATGAGCAAGGAGCTGTTTTGGTTCGGTCGGGACAGGGAGGGCGACCCC
GTTCTTGTCTTTCGAACGGCATTGCACCGCCCGGGGAGGCACAGCAGTGA
GGAATACCTCAAATACATGCTGTTTCTTATGGAGATGGGGCGGGTGGAAT
ATGGCCTCGGGCAGACGACACAGGTCTCGTTCCTGGTCGATCGGCAGGAT
GGGGGGTTGAGGAATCAGGACCCGGGGGTGGTGCTGGCCCTGGTGCCGCT
GCTGCAGGCGCATTTCCCCGACATGTTGAAGAAGACGTACATTGCTCCCG
TGAATGGCGTCTTCCAATTTATTTGGAGGATTTTCACCATGGTCCTGGCG
AAGGAAACGGCGGGGAGGGTGCAGCTGTTGAGTCGGGGGGAGATAGGGAG
AGAAGGAGGGGTGTTGAGGGAGGTGTTTTTTGAGGAGCAGTTGATGACGT
ATTTGGGAGGAACCTTGGAAGCGTATGAGGACGGGGTGGATGGGGAGGAA
GAGAGGGAGGGTGGAAGGGGGAGGGGGAATGGGAGTATGGCGTCGGTCTT
CTCTTCCGCGTGAAGAGGAAGAGAGGAAAGGAGAGAGGCAAGGAAGGAAG
GAGGAAGGTAGGGGAAGAGGGAGGGAAAGGAAGCGCCTGATTTAGGATAT
GGCAGCGCCTTCTCTTAACTTTGTTTATTGCGCTAGGGAGGAAAGGAGAG
ACAAGGGAGGGACGGATGAAGGAGGAAAGATAAAGAGATTCATTGTTTAT
TTAGCATTTTTGTTTATTTGTCGTCATTATTTCCTGTCATCAGCCAACTT
GTACAAACAAAGCCAAAGTTAAAAAAAAAATACCGGGTTAGGAGAGGAGG
AGGAGAAAGGATGATAAAGAGCAGCAGCAGCAGCAGCAGCAGTAAAAAAG
CGATTTGTCATGTAGAGTACCAGGTGATTTCCACCCGCGAATCAGAGAGA
GAGGATCTTATATGAAAGAGCAAGGGAGACAAAACAAGGAGTGGAGCAAG
GCGGCACAAGAAGAAAAAAGAAGAAGTTTAGAAGAATTCATCAAGGGGGG
GGTAAACGCAAGAAAAAAACGCGAAGCAATTCTCTTTTCGTCCCTGTTAT
TATCACTTTTTTTCTTCTGTGTTGTACACGTGTT back to topprotein sequence of jgi.p|Nanoce1779_2|602410 >mRNA_8076-protein ID=mRNA_8076-protein|Name=jgi.p|Nanoce1779_2|602410|organism=Nannochloropsis oceanica|type=polypeptide|length=247bp
MLPDSLTHWVAPGDLVRFIRTHDHLENAWSALKKTCYFRRDQGVDLLLSP
GLKAHFEHSEMSKELFWFGRDREGDPVLVFRTALHRPGRHSSEEYLKYML
FLMEMGRVEYGLGQTTQVSFLVDRQDGGLRNQDPGVVLALVPLLQAHFPD
MLKKTYIAPVNGVFQFIWRIFTMVLAKETAGRVQLLSRGEIGREGGVLRE
VFFEEQLMTYLGGTLEAYEDGVDGEEEREGGRGRGNGSMASVFSSA* back to topmRNA from alignment at scaffold_25:94175..95708- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8076 ID=mRNA_8076|Name=jgi.p|Nanoce1779_2|602410|organism=Nannochloropsis oceanica|type=mRNA|length=1534bp|location=Sequence derived from alignment at scaffold_25:94175..95708- (Nannochloropsis oceanica)
GAGGACGAGGACGAGGACGAGGACGAGGACGACCACCACGATGGTCTCGG
CCTTATTCCCCCCACGCACGCCCAAGTCGAATCCGAGGACGAATATCTTC
AAGACGAAAACCTCCCCTCCTCCGCCTCCTTGTTCTCCTCCTCATCGCTG
GCCCTCCCTCCCTCCCTTCTCCTCACCCCCACCGAACAATCTCGACTCGA
AAAACTGCACCACCGTCTCATCATGCTCCCTGACTCCTTGACGCATTGGG
TCGCCCCGGGAGACCTCGTCCGTTTCATCCGCACCCATGACCATCTCGAA
AACGCCTGGTCCGCCCTCAAGAAGACGTGTTATTTCCGTCGCGACCAAGG
CGTGGATCTCCTGCTCTCCCCGGGGCTCAAGGCGCACTTCGAGCACTCGG
AGATGAGCAAGGAGCTGTTTTGGTTCGGTCGGGACAGGGAGGGCGACCCC
GTTCTTGTCTTTCGAACGGCATTGCACCGCCCGGGGAGGCACAGCAGTGA
GGAATACCTCAAATACATGCTGTTTCTTATGGAGATGGGGCGGGTGGAAT
ATGGCCTCGGGCAGACGACACAGGTCTCGTTCCTGGTCGATCGGCAGGAT
GGGGGGTTGAGGAATCAGGACCCGGGGGTGGTGCTGGCCCTGGTGCCGCT
GCTGCAGGCGCATTTCCCCGACATGTTGAAGAAGACGTACATTGCTCCCG
TGAATGGCGTCTTCCAATTTATTTGGAGGATTTTCACCATGGTCCTGGCG
AAGGAAACGGCGGGGAGGGTGCAGCTGTTGAGTCGGGGGGAGATAGGGAG
AGAAGGAGGGGTGTTGAGGGAGGTGTTTTTTGAGGAGCAGTTGATGACGT
ATTTGGGAGGAACCTTGGAAGCGTATGAGGACGGGGTGGATGGGGAGGAA
GAGAGGGAGGGTGGAAGGGGGAGGGGGAATGGGAGTATGGCGTCGGTCTT
CTCTTCCGCGTGAAGAGGAAGAGAGGAAAGGAGAGAGGCAAGGAAGGAAG
GAGGAAGGTAGGGGAAGAGGGAGGGAAAGGAAGCGCCTGATTTAGGATAT
GGCAGCGCCTTCTCTTAACTTTGTTTATTGCGCTAGGGAGGAAAGGAGAG
ACAAGGGAGGGACGGATGAAGGAGGAAAGATAAAGAGATTCATTGTTTAT
TTAGCATTTTTGTTTATTTGTCGTCATTATTTCCTGTCATCAGCCAACTT
GTACAAACAAAGCCAAAGTTAAAAAAAAAATACCGGGTTAGGAGAGGAGG
AGGAGAAAGGATGATAAAGAGCAGCAGCAGCAGCAGCAGCAGTAAAAAAG
CGATTTGTCATGTAGAGTACCAGGTGATTTCCACCCGCGAATCAGAGAGA
GAGGATCTTATATGAAAGAGCAAGGGAGACAAAACAAGGAGTGGAGCAAG
GCGGCACAAGAAGAAAAAAGAAGAAGTTTAGAAGAATTCATCAAGGGGGG
GGTAAACGCAAGAAAAAAACGCGAAGCAATTCTCTTTTCGTCCCTGTTAT
TATCACTTTTTTTCTTCTGTGTTGTACACGTGTT back to topCoding sequence (CDS) from alignment at scaffold_25:94175..95708- >mRNA_8076 ID=mRNA_8076|Name=jgi.p|Nanoce1779_2|602410|organism=Nannochloropsis oceanica|type=CDS|length=741bp|location=Sequence derived from alignment at scaffold_25:94175..95708- (Nannochloropsis oceanica)
ATGCTCCCTGACTCCTTGACGCATTGGGTCGCCCCGGGAGACCTCGTCCG
TTTCATCCGCACCCATGACCATCTCGAAAACGCCTGGTCCGCCCTCAAGA
AGACGTGTTATTTCCGTCGCGACCAAGGCGTGGATCTCCTGCTCTCCCCG
GGGCTCAAGGCGCACTTCGAGCACTCGGAGATGAGCAAGGAGCTGTTTTG
GTTCGGTCGGGACAGGGAGGGCGACCCCGTTCTTGTCTTTCGAACGGCAT
TGCACCGCCCGGGGAGGCACAGCAGTGAGGAATACCTCAAATACATGCTG
TTTCTTATGGAGATGGGGCGGGTGGAATATGGCCTCGGGCAGACGACACA
GGTCTCGTTCCTGGTCGATCGGCAGGATGGGGGGTTGAGGAATCAGGACC
CGGGGGTGGTGCTGGCCCTGGTGCCGCTGCTGCAGGCGCATTTCCCCGAC
ATGTTGAAGAAGACGTACATTGCTCCCGTGAATGGCGTCTTCCAATTTAT
TTGGAGGATTTTCACCATGGTCCTGGCGAAGGAAACGGCGGGGAGGGTGC
AGCTGTTGAGTCGGGGGGAGATAGGGAGAGAAGGAGGGGTGTTGAGGGAG
GTGTTTTTTGAGGAGCAGTTGATGACGTATTTGGGAGGAACCTTGGAAGC
GTATGAGGACGGGGTGGATGGGGAGGAAGAGAGGGAGGGTGGAAGGGGGA
GGGGGAATGGGAGTATGGCGTCGGTCTTCTCTTCCGCGTGA back to top
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