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Properties
| Property Name | Value |
|---|
| TranscriptId | 602462 |
| Track | FilteredModels2 |
| ProteinId | 602376 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_25 | supercontig | scaffold_25:69860..72408 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8064 ID=mRNA_8064|Name=jgi.p|Nanoce1779_2|602376|organism=Nannochloropsis oceanica|type=mRNA|length=2063bp
AAACCACAGAGCATCACGGGAACCGCCTTACCTCCGAGTACCCACCACCA
TGAAGACGGCAGCGGCAGCTACGGCGTTTATGCTGCTGCGCTTGGCGGCG
GCCGTGAGACATTCCTCATCCTCCTACCCCTACTCGGCCTCCTTTGGTTC
CCGCATCCGCTTCCCGACTACCTTCCTGGCCACAGTCCCCTCCCACAGTA
ACGCCGCCTTTACTACCGCCAATAAGAATCACCAACAACCGCGTCGCGTC
GCGGTCATCCGAGGCGGAGCCGCTGCTGGTGTGCCTGTGCCAGCCTCGGA
GCGCGGGGATGGGAACAAGGGCTCAGCCACTTCGACGGCTACCTTTAATT
TGATCAAGAATGTCCTTGGTGCAGGCGTTCTTTCCCTTCCTTCTGGCATC
GGGGCTTTCTCCAAGAACCCCCTCGCCATTATTCCTGCCGCTGCTCTTAC
CATGGGCTTGGGCTCCCTGTCCGCCTACTGTTTCACACTTATCGCTCGAG
TATGTGCGCTGAACAAGGTGCAGACATACGGCGAGGCGTGGAAGGAATCC
GTCGGCGAGAAGACTGCGTGGATGGTGCCAGCCGCTTGTACGTTTAAGAC
CTTCTGTGCCTGCACTGCGTACAGCATCATCATTGGTGATTCGTTTTCGT
CGTTGTTTGGTGCTACACCTGGTTTCCCGGCCATGTTAGCCAAGCGCACG
AACGTCATTGCGTGGATGTCCGCCTTTGTGCTGCTGCCTTTATGCATGCT
TAAGAGCTTTGCTCCCTTGGCGCCTTTTTCGCTCCTCGGGATCTTGGGAA
CCATGTTCACTGCTGGTGTGCTTGCTCTGCGTCTGTTCGACGGGTCTTAC
GCGCCGGGAGGACAGTTTCACGAGGCTATTGCTGCCAACCTTCGTCCAGC
CCTTGCTTCAGGGGCGGGTTCTCCCCTGTTCGGTCCGATGATGTTCGTGC
TTGTTTCAATGCTGTCCACGTCGTTTATTGCGCATTACAATGCCCCCAAG
TTCTACACGGAGTTGGAGGATCGCTCGATTCCCAAGCTCAACAAGGTGGT
GCAGAATTCTTTTAATTTTTGCACGGCCGCATTTATCTTTATGATGGGCT
GCGGGTTCTTGACCTTTGGTGGGGCGTCGCAGGGCTTGATTTTGAACAAC
TACGCCGAGAAGGACGTGCTTGCCAAGCTGTGTCGGTTGGCGATTGGGGT
GAGCATAGTCTTTGGTTACCCCTTGACGTTTGTGGGGATTCGCGACGGAG
TGTTGGACTTGATGGGGAAGAAGAATCCAAGCGGGAGAGCGCAGACAATC
ACGACGTTGATTTTGTTGTCTATCACCAGCACCTTGGCTGTGTTCTTAAG
AGATGTCGGGTTTGTTGTCTCGTTTGGTGGGGCGTTGTTAGGGAGTTGCA
TTATTTATATATTCCCGGCGTTGATTTTCATTAGGACCATGGCGGCCAAG
ATTAAGAGTGGGGAGATCGTGGAGACGCAGGCGGTGAAGAGGGAGGTGCT
TTTGAATAAGGGTATCACGGTTTTGGGGGTGGTGATGGCGATTATTGGCG
CGTCGGTGTCGGTGCTGAAGACGTTCGTGCTGAACAAGTAAGGAGACAGA
TAGATGGATTTCTCTGAGACATTTTTTTTTAAAGTTGTTGTTGTGCTTCC
CTGTCAGTGTGGGTGGGTGCGAGTCAGTATGCGTGCTAAATGTGTGGGAG
GAGCGGAGGGAGAGGGAGAAGGAGTAGGGAACAAATAGCTACACACCCGA
AAGGGGGGGGGGGGGAAGGAGGTGGGGAAAGCGCAATGCACGTGCCCCCC
TCTTCAGCATTCTAGGTGGTGTGGGTCGGTGGACAAATGGGATAGGACAG
ATGGGGATAAGGAGGAGGAAAGAAGCGAAGGAGGGAAGGTACGACTGGGA
GCACAAATAAAAAATCAGTAGGAACGCTGGGGGAAAAGGGTGGAAAGCTC
ACTGTAAGTAGATACTCAATAGTTTGTGACGATGAACGACGGAGGAGAAA
CGAAGGAGAAGGGGAGGGAGTGGAGAAGAAGGTTTGAAAGGAGTACACAC
CAACACATTTTGA back to topprotein sequence of jgi.p|Nanoce1779_2|602376 >mRNA_8064-protein ID=mRNA_8064-protein|Name=jgi.p|Nanoce1779_2|602376|organism=Nannochloropsis oceanica|type=polypeptide|length=514bp
MKTAAAATAFMLLRLAAAVRHSSSSYPYSASFGSRIRFPTTFLATVPSHS
NAAFTTANKNHQQPRRVAVIRGGAAAGVPVPASERGDGNKGSATSTATFN
LIKNVLGAGVLSLPSGIGAFSKNPLAIIPAAALTMGLGSLSAYCFTLIAR
VCALNKVQTYGEAWKESVGEKTAWMVPAACTFKTFCACTAYSIIIGDSFS
SLFGATPGFPAMLAKRTNVIAWMSAFVLLPLCMLKSFAPLAPFSLLGILG
TMFTAGVLALRLFDGSYAPGGQFHEAIAANLRPALASGAGSPLFGPMMFV
LVSMLSTSFIAHYNAPKFYTELEDRSIPKLNKVVQNSFNFCTAAFIFMMG
CGFLTFGGASQGLILNNYAEKDVLAKLCRLAIGVSIVFGYPLTFVGIRDG
VLDLMGKKNPSGRAQTITTLILLSITSTLAVFLRDVGFVVSFGGALLGSC
IIYIFPALIFIRTMAAKIKSGEIVETQAVKREVLLNKGITVLGVVMAIIG
ASVSVLKTFVLNK* back to topmRNA from alignment at scaffold_25:69860..72408+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8064 ID=mRNA_8064|Name=jgi.p|Nanoce1779_2|602376|organism=Nannochloropsis oceanica|type=mRNA|length=2549bp|location=Sequence derived from alignment at scaffold_25:69860..72408+ (Nannochloropsis oceanica)
AAACCACAGAGCATCACGGGAACCGCCTTACCTCCGAGTACCCACCACCA
TGAAGACGGCAGCGGCAGCTACGGCGTTTATGCTGCTGCGCTTGGCGGCG
GCCGTGAGACATTCCTCATCCTCCTACCCCTACTCGGCCTCCTTTGGTTC
CCGCATCCGCTTCCCGACTACCTTCCTGGCCACAGTCCCCTCCCACAGTA
ACGCCGCCTTTACTACCGCCAATAAGAATCACCAACAACCGCGTCGCGTC
GCGGTCATCCGAGGCGGAGCCGCTGCTGGTGTGCCTGTGCCAGCCTCGGA
GCGCGGGGATGGGAACAAGGGCTCAGCCACTTCGACGGCTACCTTTAATT
TGAGTACGTTGGAGCTTAGACAACGAAGGGGAAATGGGGTCAGGTTAGAT
GGGCCGACATATGCCCTTTAGTTTCTATTTCTGTCTGCCGTGATTACGTG
CCCTCTCAATTTAAGTTTTGACGGGACTTGACTTGTTCATTAGGAGTGCA
CATTCGGGTAGCGTTTTTATGGCGCGTGCCGAAGCAGACAGACATGTGCC
ATACGCTAAACTCTTGATGTGCCATACGCTAAACTCTTGTCCTCAGCTCT
CTCTACCTCTTTCCCTCCCCCGTCCCCCCTCCCCCTCCCTCAAAACAGTC
AAGAATGTCCTTGGTGCAGGCGTTCTTTCCCTTCCTTCTGGCATCGGGGC
TTTCTCCAAGAACCCCCTCGCCATTATTCCTGCCGCTGCTCTTACCATGG
GCTTGGGCTCCCTGTCCGCCTACTGTTTCACACTTATCGCTCGAGTATGT
GCGCTGAACAAGGTGCAGACATACGGGTATGTTTTCACTTTTCTTTGTCT
TGTTTCAATGATGGAGGGGACTCAATAAAATATTGAAACGGAAGAGGAAG
AACATGCAAGCACCAGCGTGATGATTCGTCTCGTCATCTCATGACTTCCA
GGAAAGCATGGTTTCTCAGTTGAGCCTTCCCTCAATTCCTACCCTTCCCC
ACCCCCCACACGCACAGCGAGGCGTGGAAGGAATCCGTCGGCGAGAAGAC
TGCGTGGATGGTGCCAGCCGCTTGTACGTTTAAGACCTTCTGTGCCTGCA
CTGCGTACAGCATCATCATTGGTGATTCGTTTTCGTCGTTGTTTGGTGCT
ACACCTGGTTTCCCGGCCATGTTAGCCAAGCGCACGAACGTCATTGCGTG
GATGTCCGCCTTTGTGCTGCTGCCTTTATGCATGCTTAAGAGCTTTGCTC
CCTTGGCGCCTTTTTCGCTCCTCGGGATCTTGGGAACCATGTTCACTGCT
GGTGTGCTTGCTCTGCGTCTGTTCGACGGGTCTTACGCGCCGGGAGGACA
GTTTCACGAGGCTATTGCTGCCAACCTTCGTCCAGCCCTTGCTTCAGGGG
CGGGTTCTCCCCTGTTCGGTCCGATGATGTTCGTGCTTGTTTCAATGCTG
TCCACGTCGTTTATTGCGCATTACAATGCCCCCAAGTTCTACACGGAGTT
GGAGGATCGCTCGATTCCCAAGCTCAACAAGGTGGTGCAGAATTCTTTTA
ATTTTTGCACGGCCGCATTTATCTTTATGATGGGCTGCGGGTTCTTGACC
TTTGGTGGGGCGTCGCAGGGCTTGATTTTGAACAACTACGCCGAGAAGGA
CGTGCTTGCCAAGCTGTGTCGGTTGGCGATTGGGGTGAGCATAGTCTTTG
GTTACCCCTTGACGTTTGTGGGGATTCGCGACGGAGTGTTGGACTTGATG
GGGAAGAAGAATCCAAGCGGGAGAGCGCAGACAATCACGACGTTGATTTT
GTTGTCTATCACCAGCACCTTGGCTGTGTTCTTAAGAGATGTCGGGTTTG
TTGTCTCGTTTGGTGGGGCGTTGTTAGGGAGTTGCATTATTTATATATTC
CCGGCGTTGATTTTCATTAGGACCATGGCGGCCAAGATTAAGAGTGGGGA
GATCGTGGAGACGCAGGCGGTGAAGAGGGAGGTGCTTTTGAATAAGGGTA
TCACGGTTTTGGGGGTGGTGATGGCGATTATTGGCGCGTCGGTGTCGGTG
CTGAAGACGTTCGTGCTGAACAAGTAAGGAGACAGATAGATGGATTTCTC
TGAGACATTTTTTTTTAAAGTTGTTGTTGTGCTTCCCTGTCAGTGTGGGT
GGGTGCGAGTCAGTATGCGTGCTAAATGTGTGGGAGGAGCGGAGGGAGAG
GGAGAAGGAGTAGGGAACAAATAGCTACACACCCGAAAGGGGGGGGGGGG
GAAGGAGGTGGGGAAAGCGCAATGCACGTGCCCCCCTCTTCAGCATTCTA
GGTGGTGTGGGTCGGTGGACAAATGGGATAGGACAGATGGGGATAAGGAG
GAGGAAAGAAGCGAAGGAGGGAAGGTACGACTGGGAGCACAAATAAAAAA
TCAGTAGGAACGCTGGGGGAAAAGGGTGGAAAGCTCACTGTAAGTAGATA
CTCAATAGTTTGTGACGATGAACGACGGAGGAGAAACGAAGGAGAAGGGG
AGGGAGTGGAGAAGAAGGTTTGAAAGGAGTACACACCAACACATTTTGA back to topCoding sequence (CDS) from alignment at scaffold_25:69860..72408+ >mRNA_8064 ID=mRNA_8064|Name=jgi.p|Nanoce1779_2|602376|organism=Nannochloropsis oceanica|type=CDS|length=4626bp|location=Sequence derived from alignment at scaffold_25:69860..72408+ (Nannochloropsis oceanica)
ATGAAGACGGCAGCGGCAGCTACGGCGTTTATGCTGCTGCGCTTGGCGGC
GGCCGTGAGACATTCCTCATCCTCCTACCCCTACTCGGCCTCCTTTGGTT
CCCGCATCCGCTTCCCGACTACCTTCCTGGCCACAGTCCCCTCCCACAGT
AACGCCGCCTTTACTACCGCCAATAAGAATCACCAACAACCGCGTCGCGT
CGCGGTCATCCGAGGCGGAGCCGCTGCTGGTGTGCCTGTGCCAGCCTCGG
AGCGCGGGGATGGGAACAAGGGCTCAGCCACTTCGACGGCTACCTTTAAT
TTGATCAAGAATGTCCTTGGTGCAGGCGTTCTTTCCCTTCCTTCTGGCAT
CGGGGCTTTCTCCAAGAACCCCCTCGCCATTATTCCTGCCGCTGCTCTTA
CCATGGGCTTGGGCTCCCTGTCCGCCTACTGTTTCACACTTATCGCTCGA
GTATGTGCGCTGAACAAGGTGCAGACATACGGCGAGGCGTGGAAGGAATC
CGTCGGCGAGAAGACTGCGTGGATGGTGCCAGCCGCTTGTACGTTTAAGA
CCTTCTGTGCCTGCACTGCGTACAGCATCATCATTGGTGATTCGTTTTCG
TCGTTGTTTGGTGCTACACCTGGTTTCCCGGCCATGTTAGCCAAGCGCAC
GAACGTCATTGCGTGGATGTCCGCCTTTGTGCTGCTGCCTTTATGCATGC
TTAAGAGCTTTGCTCCCTTGGCGCCTTTTTCGCTCCTCGGGATCTTGGGA
ACCATGTTCACTGCTGGTGTGCTTGCTCTGCGTCTGTTCGACGGGTCTTA
CGCGCCGGGAGGACAGTTTCACGAGGCTATTGCTGCCAACCTTCGTCCAG
CCCTTGCTTCAGGGGCGGGTTCTCCCCTGTTCGGTCCGATGATGTTCGTG
CTTGTTTCAATGCTGTCCACGTCGTTTATTGCGCATTACAATGCCCCCAA
GTTCTACACGGAGTTGGAGGATCGCTCGATTCCCAAGCTCAACAAGGTGG
TGCAGAATTCTTTTAATTTTTGCACGGCCGCATTTATCTTTATGATGGGC
TGCGGGTTCTTGACCTTTGGTGGGGCGTCGCAGGGCTTGATTTTGAACAA
CTACGCCGAGAAGGACGTGCTTGCCAAGCTGTGTCGGTTGGCGATTGGGG
TGAGCATAGTCTTTGGTTACCCCTTGACGTTTGTGGGGATTCGCGACGGA
GTGTTGGACTTGATGGGGAAGAAGAATCCAAGCGGGAGAGCGCAGACAAT
CACGACGTTGATTTTGTTGTCTATCACCAGCACCTTGGCTGTGTTCTTAA
GAGATGTCGGGTTTGTTGTCTCGTTTGGTGGGGCGTTGTTAGGGAGTTGC
ATTATTTATATATTCCCGGCGTTGATTTTCATTAGGACCATGGCGGCCAA
GATTAAGAGTGGGGAGATCGTGGAGACGCAGGCGGTGAAGAGGGAGGTGC
TTTTGAATAAGGGTATCACGGTTTTGGGGGTGGTGATGGCGATTATTGGC
GCGTCGGTGTCGGTGCTGAAGACGTTCGTGCTGAACAAGTAAATGAAGAC
GGCAGCGGCAGCTACGGCGTTTATGCTGCTGCGCTTGGCGGCGGCCGTGA
GACATTCCTCATCCTCCTACCCCTACTCGGCCTCCTTTGGTTCCCGCATC
CGCTTCCCGACTACCTTCCTGGCCACAGTCCCCTCCCACAGTAACGCCGC
CTTTACTACCGCCAATAAGAATCACCAACAACCGCGTCGCGTCGCGGTCA
TCCGAGGCGGAGCCGCTGCTGGTGTGCCTGTGCCAGCCTCGGAGCGCGGG
GATGGGAACAAGGGCTCAGCCACTTCGACGGCTACCTTTAATTTGATCAA
GAATGTCCTTGGTGCAGGCGTTCTTTCCCTTCCTTCTGGCATCGGGGCTT
TCTCCAAGAACCCCCTCGCCATTATTCCTGCCGCTGCTCTTACCATGGGC
TTGGGCTCCCTGTCCGCCTACTGTTTCACACTTATCGCTCGAGTATGTGC
GCTGAACAAGGTGCAGACATACGGCGAGGCGTGGAAGGAATCCGTCGGCG
AGAAGACTGCGTGGATGGTGCCAGCCGCTTGTACGTTTAAGACCTTCTGT
GCCTGCACTGCGTACAGCATCATCATTGGTGATTCGTTTTCGTCGTTGTT
TGGTGCTACACCTGGTTTCCCGGCCATGTTAGCCAAGCGCACGAACGTCA
TTGCGTGGATGTCCGCCTTTGTGCTGCTGCCTTTATGCATGCTTAAGAGC
TTTGCTCCCTTGGCGCCTTTTTCGCTCCTCGGGATCTTGGGAACCATGTT
CACTGCTGGTGTGCTTGCTCTGCGTCTGTTCGACGGGTCTTACGCGCCGG
GAGGACAGTTTCACGAGGCTATTGCTGCCAACCTTCGTCCAGCCCTTGCT
TCAGGGGCGGGTTCTCCCCTGTTCGGTCCGATGATGTTCGTGCTTGTTTC
AATGCTGTCCACGTCGTTTATTGCGCATTACAATGCCCCCAAGTTCTACA
CGGAGTTGGAGGATCGCTCGATTCCCAAGCTCAACAAGGTGGTGCAGAAT
TCTTTTAATTTTTGCACGGCCGCATTTATCTTTATGATGGGCTGCGGGTT
CTTGACCTTTGGTGGGGCGTCGCAGGGCTTGATTTTGAACAACTACGCCG
AGAAGGACGTGCTTGCCAAGCTGTGTCGGTTGGCGATTGGGGTGAGCATA
GTCTTTGGTTACCCCTTGACGTTTGTGGGGATTCGCGACGGAGTGTTGGA
CTTGATGGGGAAGAAGAATCCAAGCGGGAGAGCGCAGACAATCACGACGT
TGATTTTGTTGTCTATCACCAGCACCTTGGCTGTGTTCTTAAGAGATGTC
GGGTTTGTTGTCTCGTTTGGTGGGGCGTTGTTAGGGAGTTGCATTATTTA
TATATTCCCGGCGTTGATTTTCATTAGGACCATGGCGGCCAAGATTAAGA
GTGGGGAGATCGTGGAGACGCAGGCGGTGAAGAGGGAGGTGCTTTTGAAT
AAGGGTATCACGGTTTTGGGGGTGGTGATGGCGATTATTGGCGCGTCGGT
GTCGGTGCTGAAGACGTTCGTGCTGAACAAGTAAATGAAGACGGCAGCGG
CAGCTACGGCGTTTATGCTGCTGCGCTTGGCGGCGGCCGTGAGACATTCC
TCATCCTCCTACCCCTACTCGGCCTCCTTTGGTTCCCGCATCCGCTTCCC
GACTACCTTCCTGGCCACAGTCCCCTCCCACAGTAACGCCGCCTTTACTA
CCGCCAATAAGAATCACCAACAACCGCGTCGCGTCGCGGTCATCCGAGGC
GGAGCCGCTGCTGGTGTGCCTGTGCCAGCCTCGGAGCGCGGGGATGGGAA
CAAGGGCTCAGCCACTTCGACGGCTACCTTTAATTTGATCAAGAATGTCC
TTGGTGCAGGCGTTCTTTCCCTTCCTTCTGGCATCGGGGCTTTCTCCAAG
AACCCCCTCGCCATTATTCCTGCCGCTGCTCTTACCATGGGCTTGGGCTC
CCTGTCCGCCTACTGTTTCACACTTATCGCTCGAGTATGTGCGCTGAACA
AGGTGCAGACATACGGCGAGGCGTGGAAGGAATCCGTCGGCGAGAAGACT
GCGTGGATGGTGCCAGCCGCTTGTACGTTTAAGACCTTCTGTGCCTGCAC
TGCGTACAGCATCATCATTGGTGATTCGTTTTCGTCGTTGTTTGGTGCTA
CACCTGGTTTCCCGGCCATGTTAGCCAAGCGCACGAACGTCATTGCGTGG
ATGTCCGCCTTTGTGCTGCTGCCTTTATGCATGCTTAAGAGCTTTGCTCC
CTTGGCGCCTTTTTCGCTCCTCGGGATCTTGGGAACCATGTTCACTGCTG
GTGTGCTTGCTCTGCGTCTGTTCGACGGGTCTTACGCGCCGGGAGGACAG
TTTCACGAGGCTATTGCTGCCAACCTTCGTCCAGCCCTTGCTTCAGGGGC
GGGTTCTCCCCTGTTCGGTCCGATGATGTTCGTGCTTGTTTCAATGCTGT
CCACGTCGTTTATTGCGCATTACAATGCCCCCAAGTTCTACACGGAGTTG
GAGGATCGCTCGATTCCCAAGCTCAACAAGGTGGTGCAGAATTCTTTTAA
TTTTTGCACGGCCGCATTTATCTTTATGATGGGCTGCGGGTTCTTGACCT
TTGGTGGGGCGTCGCAGGGCTTGATTTTGAACAACTACGCCGAGAAGGAC
GTGCTTGCCAAGCTGTGTCGGTTGGCGATTGGGGTGAGCATAGTCTTTGG
TTACCCCTTGACGTTTGTGGGGATTCGCGACGGAGTGTTGGACTTGATGG
GGAAGAAGAATCCAAGCGGGAGAGCGCAGACAATCACGACGTTGATTTTG
TTGTCTATCACCAGCACCTTGGCTGTGTTCTTAAGAGATGTCGGGTTTGT
TGTCTCGTTTGGTGGGGCGTTGTTAGGGAGTTGCATTATTTATATATTCC
CGGCGTTGATTTTCATTAGGACCATGGCGGCCAAGATTAAGAGTGGGGAG
ATCGTGGAGACGCAGGCGGTGAAGAGGGAGGTGCTTTTGAATAAGGGTAT
CACGGTTTTGGGGGTGGTGATGGCGATTATTGGCGCGTCGGTGTCGGTGC
TGAAGACGTTCGTGCTGAACAAGTAA back to top
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