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Properties
| Property Name | Value |
|---|
| TranscriptId | 142609 |
| Track | FilteredModels2 |
| ProteinId | 142523 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:473897..475213 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_806 ID=mRNA_806|Name=jgi.p|Nanoce1779_2|142523|organism=Nannochloropsis oceanica|type=mRNA|length=1317bp
CTCGACGATGTTGGTACCTATTTCATTAGCTACACCGTCAAGGCCCCCTG
GACCAGCACCCCCACTGTGACCATTCGCCGAACGATTGTCGTGAAAGATT
TGAACGAGTGCAGCCTCCGACCCACCGATGCGAAATGGAACAAATGGCGG
CCACGCTGTCATAAGTGGGCGAAATGCTCCAACATCAACGGGGATATACG
TGCTCGTGCCGCCCTGGCACCATTGGAGATGGTGCAGAAGGCAACAGCAC
GTGTCTCAAGGAGGAAGGGAACTTTACCCCGAGGAATGCGAAGAACGGCA
CTGGCTGCGTGGATGTGAAAGCACCTGTGTTGGTGGTGCCTTCGTTTGAG
AAGACGTTTCAAACATGTAAATGTGAGGGGCTGGGAGGACCGGGCACGCC
AGCGCCTCCTGGATGTGCTGCTCGTGGCTATGGCAAGGAGCTCAGGGAGT
TGACCGTGGGGGGAGGGGGGGAGGGAAGGGGTTTGTTGTGTACAGACGGG
TGGCCTTGTTTTGAGGCCTATGATGACTTGCCGGACGGCACGCGGGTGAA
TTTGACTCGGCGAGTGGTAATGGGACCAGACGTAGAAGAAGATGTAGAGA
ACCACACGGCGGTGAAGGCTGGGAAGAAAACGAAGTTTTTTGTGTTGCCT
TTGAGTGTGGAGGATGATGCCGGTAACAAGGCACGCTCACAGTTGCGGTT
TTCGGTGGAAGAGGTGTCCTTGTTCTCGCACACGTCTCTGCTGGGAAGGG
GAGGAAAGAATAACAAGCCGAACTGGTCTCGCGCCCCCCCTTCAACTCCT
CCTACACCTGTTGCTCCTTCTGTTTTGAAAGTAGCGAAAATGAGGAGGAG
GGGGAGGACAACGACAGTGAGGAGGAGTTGCGGCAGGATGAGAAGAGGGA
GAAAAGTAAGCTTGCGAAGCGCGACGTTGGTGCTGGTACGACTGCTGCCG
CTGCTGCTGCCGCCGCTGTGTCAAGTCCTCCAGCTCATCGACCAAGCTGT
GATAGCGACGCCGAGCCTACGGGAGAAACAGAGGTCAATAAGGAGGAGGA
TTTTGATGGAGAAGCTGTGTTGTTGGTCATCCTCCTCATTTTGTGCAGTC
TTGGGGCTTGGATTTACAGCAGCAGCAACAACTGCGGTGATGTGCTCGCT
CCGGATGAAATAAGCGTGGGAGGGGGCGAAACAAGGGATGTGGGGGACGA
TGCGTTTGTGTACCAGGAGGGTCTTACTCCAAATAGTCGACGAAATAGAT
TTAGTTCGCCAGGAGTGAGGTTAGGCGTATCCCCTTATGCATCACCGCAA
TCATACCGTGAGGGAGA back to topprotein sequence of jgi.p|Nanoce1779_2|142523 >mRNA_806-protein ID=mRNA_806-protein|Name=jgi.p|Nanoce1779_2|142523|organism=Nannochloropsis oceanica|type=polypeptide|length=330bp
MLQHQRGYTCSCRPGTIGDGAEGNSTCLKEEGNFTPRNAKNGTGCVDVKA
PVLVVPSFEKTFQTCKCEGLGGPGTPAPPGCAARGYGKELRELTVGGGGE
GRGLLCTDGWPCFEAYDDLPDGTRVNLTRRVVMGPDVEEDVENHTAVKAG
KKTKFFVLPLSVEDDAGNKARSQLRFSVEEVSLFSHTSLLGRGGKNNKPN
WSRAPPSTPPTPVAPSVLKVAKMRRRGRTTTVRRSCGRMRRGRKVSLRSA
TLVLVRLLPLLLPPLCQVLQLIDQAVIATPSLREKQRSIRRRILMEKLCC
WSSSSFCAVLGLGFTAAATTAVMCSLRMK* back to topmRNA from alignment at scaffold_2:473897..475213- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_806 ID=mRNA_806|Name=jgi.p|Nanoce1779_2|142523|organism=Nannochloropsis oceanica|type=mRNA|length=1317bp|location=Sequence derived from alignment at scaffold_2:473897..475213- (Nannochloropsis oceanica)
CTCGACGATGTTGGTACCTATTTCATTAGCTACACCGTCAAGGCCCCCTG
GACCAGCACCCCCACTGTGACCATTCGCCGAACGATTGTCGTGAAAGATT
TGAACGAGTGCAGCCTCCGACCCACCGATGCGAAATGGAACAAATGGCGG
CCACGCTGTCATAAGTGGGCGAAATGCTCCAACATCAACGGGGATATACG
TGCTCGTGCCGCCCTGGCACCATTGGAGATGGTGCAGAAGGCAACAGCAC
GTGTCTCAAGGAGGAAGGGAACTTTACCCCGAGGAATGCGAAGAACGGCA
CTGGCTGCGTGGATGTGAAAGCACCTGTGTTGGTGGTGCCTTCGTTTGAG
AAGACGTTTCAAACATGTAAATGTGAGGGGCTGGGAGGACCGGGCACGCC
AGCGCCTCCTGGATGTGCTGCTCGTGGCTATGGCAAGGAGCTCAGGGAGT
TGACCGTGGGGGGAGGGGGGGAGGGAAGGGGTTTGTTGTGTACAGACGGG
TGGCCTTGTTTTGAGGCCTATGATGACTTGCCGGACGGCACGCGGGTGAA
TTTGACTCGGCGAGTGGTAATGGGACCAGACGTAGAAGAAGATGTAGAGA
ACCACACGGCGGTGAAGGCTGGGAAGAAAACGAAGTTTTTTGTGTTGCCT
TTGAGTGTGGAGGATGATGCCGGTAACAAGGCACGCTCACAGTTGCGGTT
TTCGGTGGAAGAGGTGTCCTTGTTCTCGCACACGTCTCTGCTGGGAAGGG
GAGGAAAGAATAACAAGCCGAACTGGTCTCGCGCCCCCCCTTCAACTCCT
CCTACACCTGTTGCTCCTTCTGTTTTGAAAGTAGCGAAAATGAGGAGGAG
GGGGAGGACAACGACAGTGAGGAGGAGTTGCGGCAGGATGAGAAGAGGGA
GAAAAGTAAGCTTGCGAAGCGCGACGTTGGTGCTGGTACGACTGCTGCCG
CTGCTGCTGCCGCCGCTGTGTCAAGTCCTCCAGCTCATCGACCAAGCTGT
GATAGCGACGCCGAGCCTACGGGAGAAACAGAGGTCAATAAGGAGGAGGA
TTTTGATGGAGAAGCTGTGTTGTTGGTCATCCTCCTCATTTTGTGCAGTC
TTGGGGCTTGGATTTACAGCAGCAGCAACAACTGCGGTGATGTGCTCGCT
CCGGATGAAATAAGCGTGGGAGGGGGCGAAACAAGGGATGTGGGGGACGA
TGCGTTTGTGTACCAGGAGGGTCTTACTCCAAATAGTCGACGAAATAGAT
TTAGTTCGCCAGGAGTGAGGTTAGGCGTATCCCCTTATGCATCACCGCAA
TCATACCGTGAGGGAGA back to topCoding sequence (CDS) from alignment at scaffold_2:473897..475213- >mRNA_806 ID=mRNA_806|Name=jgi.p|Nanoce1779_2|142523|organism=Nannochloropsis oceanica|type=CDS|length=990bp|location=Sequence derived from alignment at scaffold_2:473897..475213- (Nannochloropsis oceanica)
ATGCTCCAACATCAACGGGGATATACGTGCTCGTGCCGCCCTGGCACCAT
TGGAGATGGTGCAGAAGGCAACAGCACGTGTCTCAAGGAGGAAGGGAACT
TTACCCCGAGGAATGCGAAGAACGGCACTGGCTGCGTGGATGTGAAAGCA
CCTGTGTTGGTGGTGCCTTCGTTTGAGAAGACGTTTCAAACATGTAAATG
TGAGGGGCTGGGAGGACCGGGCACGCCAGCGCCTCCTGGATGTGCTGCTC
GTGGCTATGGCAAGGAGCTCAGGGAGTTGACCGTGGGGGGAGGGGGGGAG
GGAAGGGGTTTGTTGTGTACAGACGGGTGGCCTTGTTTTGAGGCCTATGA
TGACTTGCCGGACGGCACGCGGGTGAATTTGACTCGGCGAGTGGTAATGG
GACCAGACGTAGAAGAAGATGTAGAGAACCACACGGCGGTGAAGGCTGGG
AAGAAAACGAAGTTTTTTGTGTTGCCTTTGAGTGTGGAGGATGATGCCGG
TAACAAGGCACGCTCACAGTTGCGGTTTTCGGTGGAAGAGGTGTCCTTGT
TCTCGCACACGTCTCTGCTGGGAAGGGGAGGAAAGAATAACAAGCCGAAC
TGGTCTCGCGCCCCCCCTTCAACTCCTCCTACACCTGTTGCTCCTTCTGT
TTTGAAAGTAGCGAAAATGAGGAGGAGGGGGAGGACAACGACAGTGAGGA
GGAGTTGCGGCAGGATGAGAAGAGGGAGAAAAGTAAGCTTGCGAAGCGCG
ACGTTGGTGCTGGTACGACTGCTGCCGCTGCTGCTGCCGCCGCTGTGTCA
AGTCCTCCAGCTCATCGACCAAGCTGTGATAGCGACGCCGAGCCTACGGG
AGAAACAGAGGTCAATAAGGAGGAGGATTTTGATGGAGAAGCTGTGTTGT
TGGTCATCCTCCTCATTTTGTGCAGTCTTGGGGCTTGGATTTACAGCAGC
AGCAACAACTGCGGTGATGTGCTCGCTCCGGATGAAATAA back to top
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