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Properties
| Property Name | Value |
|---|
| TranscriptId | 602427 |
| Track | FilteredModels2 |
| ProteinId | 602341 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_25 | supercontig | scaffold_25:50908..53911 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8056 ID=mRNA_8056|Name=jgi.p|Nanoce1779_2|602341|organism=Nannochloropsis oceanica|type=mRNA|length=2210bp
CAGGACGTACATCCATATTTCCCACCGATTCAGGGTATATAAATGATCAT
GTCTTCCTGGAGCAACAGCAACAGCAGGAGAAGCTGCCTCTCCTTCCCCA
CCATTGTCGCACTCCTTGTCCTGGTCCTCCTCCTGCAGCTCGGCCAGGTA
CAAGCCCGGCTGGGTGGGGGTAGCAGCAAACCCACCAAGAAAACCCCGCC
CGTCTGGCCTCCCCTATTGACAGCACAGCTGTTGCAAAACCGCGGTGGCA
ACTTGAGTGACACCACCCTTGCGTATGATTTGCCGAATGGCCGCAACCTG
AACATCATCAAAGATAGGCAGACAGGATTGACCTTATGGGATAATGAGAG
GGGAAATGGCTCGACCTATTATTATCACAAGCAACCAGAGGTGGAGAGCT
GCCAGGCGCTGAACATGCACGTGGGTCTCCTAAAGCCTGATTGGTTGGCT
GGGGCCCGCTACAAGGGCGTGGAGGACGTGAACGGGCACCAGTGCGACGT
CTGGGCGCAGTCGAGCTCCATACATCACCCTTTTGTCACTTACTTTGCGG
ATGTGGAGACACAGCGGCCGTGGCGGTGGATCTTTTTTGATGGGGCTATC
TTCGATGTGATTGAATGGACCCCTGGAGGCACCCTGCCCGAGGCCGACTG
GCAGCTTCCTGCTTATTGCTTTGGGGAGGATGGGGTAGATCAAGTGCACT
TGGAGGAGCAAAGGCAGAAGGTTCGGTTGTCGATGGCATAAGTAAATGAG
AATGAAATAACAAGAAGCGTGGAAGACTGGAGGGAAAGGAGGAAAAGGCA
TGGTGCGCTGGGGGCTCGCCTTCATCTCGGAAAAAGGATTAATAACAAGA
ACGCGCAGTTTTGTCACCAAAATACTATTTTTCTTGTTATTATCGAAAGG
TTTTGAAAAATTCTCTCTCCATCCACATACCGCCACCCCACTTATATCAC
CCCAGACTTCACAAAATAAAACGAGCAGATGTAATGAGTTGACAGGATAC
TTAGTAAACTCGCTATTCCTGGTTTTGGTAAGATGGAAATATTGCCCTGT
GTCGACAAGAATCAATAATAAATGCTACATGGTAGGAAGAGAATAATAAA
CAACACAGCGGATCGGCACGCATGCTTTCTCCTCCTCCTCTTCCTGATCC
CCGACGACCATGGTCAGACCAGGCCTCTTGCTACTCCGGGGCCCGGGCAT
CGCTTTTTTTCTTTGGCGACGACTAAACACAAGCAAGCACCCGGCATCAT
TTCCCACTGCAAACGACGCCATCACGCCTTCAAAATTCAAACAAACATAC
GAAACCACCCTGCACAAGCACCAGCAAAGCATGGAGACATCAATCCTTCC
GTCGCAGACATCGGTACCAGCGGTACCATCAGCAGGAGACGACGTCACTG
CCCCCTCCACGCTCATCAGCGTCACCTCTACAAACCATGCTCCGCCCACC
TCCACCCCTCCCCGTCGGCTTCCCCTCCTCCCCCCGACCAGCCCCCTCAA
CCCATCCAGCAGCACTGCCGATGCCTTTGCCCAATCTACGTCATGCAAAA
CACCTCGCACATCTGACGATGACGATGGAGGAGGATTCAGCACCCCCGTC
GCTCCTACAACCGGCGCGCTGCACAGCACAGGCTCCGCTCTTCACCACAA
TCACCACCGCCGTCACTCCCACTGCTTGCAACACTCCCCTTCTCCTTCTC
CTTCCCAATCCATCAAACCTGATGCCTACGAAGGACGTGATCATGACCAA
GATTGTCCCATATGCATGAGTCCCCTTGCCTCCAGGTCCATATACAAAAC
GCGTTGCTCCCACAGGTTCCACAAATCGTGTCTGGTCGAGTCAAGGGCCG
CACACATAAATGGATGTCCTTTCTGTAGGGGAGAAATCACCCCGGGGCTG
ACGCCGTTCGAAGCATGCCTGGGAAGGGTGTTAAGTGAGAGGGAACAGAT
CATCTCGAGGGCAAGAACAGCGAGGCAGGCTGTGCTGGCACGGATGCAGC
AACGAGGGGAAGGGAGGGAAGGTGGAGGGAGGAGCTTGGCCTTTTCTGTG
TTGAGGGAGGAGGAGGTCCCGTATAGGGGAAGGAGGGGATTAGAGGAGCG
GTTTGAGACAGAGGCGATGGTAGGGGAAGGGGAGGAAGGGAGGGTGGGAG
GGGAGGGAGGGAGGAGGGTGGTGATGGCCTTGACGACGGAGGATTTGGGC
CATCGGATTG back to topprotein sequence of jgi.p|Nanoce1779_2|602341 >mRNA_8056-protein ID=mRNA_8056-protein|Name=jgi.p|Nanoce1779_2|602341|organism=Nannochloropsis oceanica|type=polypeptide|length=233bp
MIMSSWSNSNSRRSCLSFPTIVALLVLVLLLQLGQVQARLGGGSSKPTKK
TPPVWPPLLTAQLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWD
NERGNGSTYYYHKQPEVESCQALNMHVGLLKPDWLAGARYKGVEDVNGHQ
CDVWAQSSSIHHPFVTYFADVETQRPWRWIFFDGAIFDVIEWTPGGTLPE
ADWQLPAYCFGEDGVDQVHLEEQRQKVRLSMA* back to topmRNA from alignment at scaffold_25:50908..53911- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8056 ID=mRNA_8056|Name=jgi.p|Nanoce1779_2|602341|organism=Nannochloropsis oceanica|type=mRNA|length=3004bp|location=Sequence derived from alignment at scaffold_25:50908..53911- (Nannochloropsis oceanica)
CAGGACGTACATCCATATTTCCCACCGATTCAGGGTATATAAATGATCAT
GTCTTCCTGGAGCAACAGCAACAGCAGGAGAAGCTGCCTCTCCTTCCCCA
CCATTGTCGCACTCCTTGTCCTGGTCCTCCTCCTGCAGCTCGGCCAGGTA
CAAGCCCGGCTGGGTGGGGGTAGCAGCAAACCCACCAAGAAAACCCCGCC
CGTCTGGCCTCCCCTATTGACAGCACGTAAGTCTTAAGTGGAAGTTGTGG
TGGCTGCTTCGTTGTCCTTTTCTACTGTCCTTTAATCTACCTCCCCATCC
ATGAGGTTAAAAACCAAAGTTTCCGCTGCAGCCGTAGCTATGCACTTAGA
GTCATCTTAATGACAGCTTGGGTCATTGTCATGGCGGAGCTGTGTCTCTA
TTATCCCCCCTTGATCTCCCCAGGCTTACTCCCGCAATCGTCTTCTTTTC
CTCCTTCTTTCCCCGTCCCGTAGAGCTGTTGCAAAACCGCGGTGGCAACT
TGAGTGACACCACCCTTGCGTATGATTTGCCGAATGGCCGCAACCTGAAC
ATCATCAAAGATAGGCAGACAGGATTGACCTTATGGGATAATGAGAGGGG
AAATGGCTCGACCTATTATTATCACAAGCAACCAGAGGTGGAGAGCTGCC
AGGCGCTGGTAAGGAAAGGAGGGAGGGACTGGAGGAGGAACGGAAATAGG
GTTAAAGTCTGCGGATTGAGCTAAATTTATCTGGTCAACACCATCTTTAC
CCTGTCCGAAATAATGCAGAACATGCACGTGGGTCTCCTAAAGCCTGATT
GGTTGGCTGGGGCCCGCTACAAGGGCGTGGAGGACGTGAACGGGCACCAG
TGCGACGTCTGGGCGCAGTCGAGCTCCATACATCACCCTTTTGTCACTTA
CTTTGCGGATGTGGAGACACAGCGGCCGTGGCGGTGGATCTTTTTTGATG
GGGCTATCTTCGATGTAAGTCTTCCTTTATTTAGTTATTTATTTGTTTCA
ATTTATTTATCTACTTATCGGTTTACACTTTCGTCGATTCATAGGGATGT
CTGGTAAATTTGAAGCTACATAAACTATTTGTCGAGCTCATTTAAGATAC
CCATGTCTTTCCTTTCTTTCCTCTCATACACGCTTACATTCACATCCCTC
CCTCTTTTCAGGTGATTGAATGGACCCCTGGAGGCACCCTGCCCGAGGCC
GACTGGCAGCTTCCTGCTTATTGCTTTGGGGAGGATGGGGTAGATCAAGT
GCACTTGGAGGAGCAAAGGCAGAAGGTTCGGTTGTCGATGGCATAAGTAA
ATGAGAATGAAATAACAAGAAGCGTGGAAGACTGGAGGGAAAGGAGGAAA
AGGCATGGTGCGCTGGGGGCTCGCCTTCATCTCGGAAAAAGGATTAATAA
CAAGAACGCGCAGTTTTGTCACCAAAATACTATTTTTCTTGTTATTATCG
AAAGGTTTTGAAAAATTCTCTCTCCATCCACATACCGCCACCCCACTTAT
ATCACCCCAGACTTCACAAAATAAAACGAGCAGATGTAATGAGTTGACAG
GATACTTAGTAAACTCGCTATTCCTGGTTTTGGTAAGATGGAAATATTGC
CCTGTGTCGACAAGAATCAATAATAAATGCTACATGGTAGGAAGAGAATA
ATAAACAACACAGCGGATCGGCACGCATGCTTTCTCCTCCTCCTCTTCCT
GATCCCCGACGACCATGGCAAGTGACAGTCGTGTATAATCGGTGTACAGG
ACAACTTACGATTTCCTTCATGATAGTAGTTGTCATTCAGGGAGTTCTAT
ACACCGTGAAACTTGTGAGAGCTGTTTCTGGGAGTCGAGGATACGGTCTT
CTGACGATGATGACGATCCCCAAGTGCAAGCACACCCAAATGCCCCATGC
TTCATGCTTATGCATATATGTCCCTGCATCTACACCCACCACATACGCAC
ATGCAGGTCAGACCAGGCCTCTTGCTACTCCGGGGCCCGGGCATCGCTTT
TTTTCTTTGGCGACGACTAAACACAAGCAAGCACCCGGCATCATTTCCCA
CTGCAAACGACGCCATCACGCCTTCAAAATTCAAACAAACATACGAAACC
ACCCTGCACAAGCACCAGCAAAGCATGGAGACATCAATCCTTCCGTCGCA
GACATCGGTACCAGCGGTACCATCAGCAGGAGACGACGTCACTGCCCCCT
CCACGCTCATCAGCGTCACCTCTACAAACCATGCTCCGCCCACCTCCACC
CCTCCCCGTCGGCTTCCCCTCCTCCCCCCGACCAGCCCCCTCAACCCATC
CAGCAGCACTGCCGATGCCTTTGCCCAATCTACGTCATGCAAAACACCTC
GCACATCTGACGATGACGATGGAGGAGGATTCAGCACCCCCGTCGCTCCT
ACAACCGGCGCGCTGCACAGCACAGGCTCCGCTCTTCACCACAATCACCA
CCGCCGTCACTCCCACTGCTTGCAACACTCCCCTTCTCCTTCTCCTTCCC
AATCCATCAAACCTGATGCCTACGAAGGACGTGATCATGACCAAGATTGT
CCCATATGCATGAGTCCCCTTGCCTCCAGGTCCATATACAAAACGCGTTG
CTCCCACAGGTTCCACAAATCGTGTCTGGTCGAGTCAAGGGCCGCACACA
TAAATGGATGTCCTTTCTGTAGGGGAGAAATCACCCCGGGGCTGACGCCG
TTCGAAGCATGCCTGGGAAGGGTGTTAAGTGAGAGGGAACAGATCATCTC
GAGGGCAAGAACAGCGAGGCAGGCTGTGCTGGCACGGATGCAGCAACGAG
GGGAAGGGAGGGAAGGTGGAGGGAGGAGCTTGGCCTTTTCTGTGTTGAGG
GAGGAGGAGGTCCCGTATAGGGGAAGGAGGGGATTAGAGGAGCGGTTTGA
GACAGAGGCGATGGTAGGGGAAGGGGAGGAAGGGAGGGTGGGAGGGGAGG
GAGGGAGGAGGGTGGTGATGGCCTTGACGACGGAGGATTTGGGCCATCGG
ATTG back to topCoding sequence (CDS) from alignment at scaffold_25:50908..53911- >mRNA_8056 ID=mRNA_8056|Name=jgi.p|Nanoce1779_2|602341|organism=Nannochloropsis oceanica|type=CDS|length=2796bp|location=Sequence derived from alignment at scaffold_25:50908..53911- (Nannochloropsis oceanica)
GTGATTGAATGGACCCCTGGAGGCACCCTGCCCGAGGCCGACTGGCAGCT
TCCTGCTTATTGCTTTGGGGAGGATGGGGTAGATCAAGTGCACTTGGAGG
AGCAAAGGCAGAAGGTTCGGTTGTCGATGGCATAAAACATGCACGTGGGT
CTCCTAAAGCCTGATTGGTTGGCTGGGGCCCGCTACAAGGGCGTGGAGGA
CGTGAACGGGCACCAGTGCGACGTCTGGGCGCAGTCGAGCTCCATACATC
ACCCTTTTGTCACTTACTTTGCGGATGTGGAGACACAGCGGCCGTGGCGG
TGGATCTTTTTTGATGGGGCTATCTTCGATAGCTGTTGCAAAACCGCGGT
GGCAACTTGAGTGACACCACCCTTGCGTATGATTTGCCGAATGGCCGCAA
CCTGAACATCATCAAAGATAGGCAGACAGGATTGACCTTATGGGATAATG
AGAGGGGAAATGGCTCGACCTATTATTATCACAAGCAACCAGAGGTGGAG
AGCTGCCAGGCGCTGATGATCATGTCTTCCTGGAGCAACAGCAACAGCAG
GAGAAGCTGCCTCTCCTTCCCCACCATTGTCGCACTCCTTGTCCTGGTCC
TCCTCCTGCAGCTCGGCCAGGTACAAGCCCGGCTGGGTGGGGGTAGCAGC
AAACCCACCAAGAAAACCCCGCCCGTCTGGCCTCCCCTATTGACAGCACG
TGATTGAATGGACCCCTGGAGGCACCCTGCCCGAGGCCGACTGGCAGCTT
CCTGCTTATTGCTTTGGGGAGGATGGGGTAGATCAAGTGCACTTGGAGGA
GCAAAGGCAGAAGGTTCGGTTGTCGATGGCATAAAACATGCACGTGGGTC
TCCTAAAGCCTGATTGGTTGGCTGGGGCCCGCTACAAGGGCGTGGAGGAC
GTGAACGGGCACCAGTGCGACGTCTGGGCGCAGTCGAGCTCCATACATCA
CCCTTTTGTCACTTACTTTGCGGATGTGGAGACACAGCGGCCGTGGCGGT
GGATCTTTTTTGATGGGGCTATCTTCGATAGCTGTTGCAAAACCGCGGTG
GCAACTTGAGTGACACCACCCTTGCGTATGATTTGCCGAATGGCCGCAAC
CTGAACATCATCAAAGATAGGCAGACAGGATTGACCTTATGGGATAATGA
GAGGGGAAATGGCTCGACCTATTATTATCACAAGCAACCAGAGGTGGAGA
GCTGCCAGGCGCTGATGATCATGTCTTCCTGGAGCAACAGCAACAGCAGG
AGAAGCTGCCTCTCCTTCCCCACCATTGTCGCACTCCTTGTCCTGGTCCT
CCTCCTGCAGCTCGGCCAGGTACAAGCCCGGCTGGGTGGGGGTAGCAGCA
AACCCACCAAGAAAACCCCGCCCGTCTGGCCTCCCCTATTGACAGCACGT
GATTGAATGGACCCCTGGAGGCACCCTGCCCGAGGCCGACTGGCAGCTTC
CTGCTTATTGCTTTGGGGAGGATGGGGTAGATCAAGTGCACTTGGAGGAG
CAAAGGCAGAAGGTTCGGTTGTCGATGGCATAAAACATGCACGTGGGTCT
CCTAAAGCCTGATTGGTTGGCTGGGGCCCGCTACAAGGGCGTGGAGGACG
TGAACGGGCACCAGTGCGACGTCTGGGCGCAGTCGAGCTCCATACATCAC
CCTTTTGTCACTTACTTTGCGGATGTGGAGACACAGCGGCCGTGGCGGTG
GATCTTTTTTGATGGGGCTATCTTCGATAGCTGTTGCAAAACCGCGGTGG
CAACTTGAGTGACACCACCCTTGCGTATGATTTGCCGAATGGCCGCAACC
TGAACATCATCAAAGATAGGCAGACAGGATTGACCTTATGGGATAATGAG
AGGGGAAATGGCTCGACCTATTATTATCACAAGCAACCAGAGGTGGAGAG
CTGCCAGGCGCTGATGATCATGTCTTCCTGGAGCAACAGCAACAGCAGGA
GAAGCTGCCTCTCCTTCCCCACCATTGTCGCACTCCTTGTCCTGGTCCTC
CTCCTGCAGCTCGGCCAGGTACAAGCCCGGCTGGGTGGGGGTAGCAGCAA
ACCCACCAAGAAAACCCCGCCCGTCTGGCCTCCCCTATTGACAGCACGTG
ATTGAATGGACCCCTGGAGGCACCCTGCCCGAGGCCGACTGGCAGCTTCC
TGCTTATTGCTTTGGGGAGGATGGGGTAGATCAAGTGCACTTGGAGGAGC
AAAGGCAGAAGGTTCGGTTGTCGATGGCATAAAACATGCACGTGGGTCTC
CTAAAGCCTGATTGGTTGGCTGGGGCCCGCTACAAGGGCGTGGAGGACGT
GAACGGGCACCAGTGCGACGTCTGGGCGCAGTCGAGCTCCATACATCACC
CTTTTGTCACTTACTTTGCGGATGTGGAGACACAGCGGCCGTGGCGGTGG
ATCTTTTTTGATGGGGCTATCTTCGATAGCTGTTGCAAAACCGCGGTGGC
AACTTGAGTGACACCACCCTTGCGTATGATTTGCCGAATGGCCGCAACCT
GAACATCATCAAAGATAGGCAGACAGGATTGACCTTATGGGATAATGAGA
GGGGAAATGGCTCGACCTATTATTATCACAAGCAACCAGAGGTGGAGAGC
TGCCAGGCGCTGATGATCATGTCTTCCTGGAGCAACAGCAACAGCAGGAG
AAGCTGCCTCTCCTTCCCCACCATTGTCGCACTCCTTGTCCTGGTCCTCC
TCCTGCAGCTCGGCCAGGTACAAGCCCGGCTGGGTGGGGGTAGCAGCAAA
CCCACCAAGAAAACCCCGCCCGTCTGGCCTCCCCTATTGACAGCAC back to top
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