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Properties
| Property Name | Value |
|---|
| TranscriptId | 602403 |
| Track | FilteredModels2 |
| ProteinId | 602317 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_25 | supercontig | scaffold_25:36789..38845 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8048 ID=mRNA_8048|Name=jgi.p|Nanoce1779_2|602317|organism=Nannochloropsis oceanica|type=mRNA|length=1325bp
ATAGCAAAAATAATAGCAACAGCCACAGCTACGATCCTCTATTCGATGAC
GTACCGGACCGAAGAAATACTTCCAGTTTGAAGTGGTCCAAATATGGTGA
TGAGATACTACCGCTGTGGGTGGCTGACATGGACTTCCGGGCGCCACAAT
GTGTGATTGACGCGATGCACGCTCGGGCCGAGCACGGCGTCTACGGCTAC
TCTGTTCCGAAAGAGGAGGTGACGATGGAGGTGATAAAGTACTTGAAACG
GACGGCGCATTACCAGATTGAGCCCGACTGGATCGTCTGGAGCCATGGCC
TGGTCCCTGCGCTCACTGTCGCCGCACGCATGGCTGGTGGGCCTGGGGAT
AGCGTGATGACCAACACTCCGATCTACCCTCCCTTCCTGTGGACCCCTAA
AACCGCCGACATGACCACACTGCAAGTGCCCCTCAAATTTGAAGGAGAGG
GGGGGGGGGGGCAATGGAGGATGGACATCGCGAAAATGGAAGAGATGGTG
ACGCCGACGACGAAAATGTTCACGCTTTGTAATCCTCACAATCCGGTGGG
GAAGGTGTTTACAATTGAGGAACTGCGGCAATTGGGTTATTTCTGCAAGC
GTCATGACCTCATCCTTCTCTCCGACGAGATTTACCACGACCTGATCCTC
GACCCAGCACTCACTCCCCACGTCCCCATCGCGGCCCTTGAAGACCCGGA
GCTGATGAAAAGGACGATTATCCTCCACGCCGCGAGCAAGACGTACAATG
TGCCTGGCCTCTCATGCGCCTATGCCATCATTCCCGACCTCGCGCTTCGG
ACGCGGTTCAAAAAGGCCGCAAAGGGCTTTGTGACAGAAATCAACGCCTT
CGGGTACGAATCCTTGTACGCGTCTTACACCGGAGGCGAATCCTGGCGTC
AGTCGATGCTTTCCTACCTCAAGAGCAACAGGGACTTCCTCCACCACTTC
TTTTCCACCCGCCTCCCCCTCCTGAAGCCCTACCCCAACCATGACGCCAC
CTACCTGCTGTGGGTGGATACTTCTGCTTTGGCACCTTATCTCAAGCAAG
GAGAGGAGGCCGCAGAATTCTTCATGAGAGAGGCGAAGGTGGCTGTGTCG
GACGGAAGGGACTTTGGAGCTAAGCACCACGTGAGGATTAATTTTGGATG
TCCACGCGCACGACTGCTGGAAGGGTTGGAAAAAATGGAAAAGGCCGTGA
ATGAGCTCGTGGCAGCCAGAGGAAAGAAAGAGGGAAAGTGAGAAGGGATG
GACCCGGGGGGGGAGGAAGGGAGGAAGAGGATGGGAGGGAGCTGGAAAGG
GTTATCTTTAATGTATGGGAACGAG back to topprotein sequence of jgi.p|Nanoce1779_2|602317 >mRNA_8048-protein ID=mRNA_8048-protein|Name=jgi.p|Nanoce1779_2|602317|organism=Nannochloropsis oceanica|type=polypeptide|length=371bp
MDFRAPQCVIDAMHARAEHGVYGYSVPKEEVTMEVIKYLKRTAHYQIEPD
WIVWSHGLVPALTVAARMAGGPGDSVMTNTPIYPPFLWTPKTADMTTLQV
PLKFEGEGGGGQWRMDIAKMEEMVTPTTKMFTLCNPHNPVGKVFTIEELR
QLGYFCKRHDLILLSDEIYHDLILDPALTPHVPIAALEDPELMKRTIILH
AASKTYNVPGLSCAYAIIPDLALRTRFKKAAKGFVTEINAFGYESLYASY
TGGESWRQSMLSYLKSNRDFLHHFFSTRLPLLKPYPNHDATYLLWVDTSA
LAPYLKQGEEAAEFFMREAKVAVSDGRDFGAKHHVRINFGCPRARLLEGL
EKMEKAVNELVAARGKKEGK* back to topmRNA from alignment at scaffold_25:36789..38845- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8048 ID=mRNA_8048|Name=jgi.p|Nanoce1779_2|602317|organism=Nannochloropsis oceanica|type=mRNA|length=2057bp|location=Sequence derived from alignment at scaffold_25:36789..38845- (Nannochloropsis oceanica)
ATAGCAAAAATAATAGCAACAGCCACAGCTACGATCCTCTATTCGATGAC
GTACCGGACCGAAGGTAAATGCTCTCCATATAGATCTCTTCGCTGTTTGG
TTTTTTAGGAAAGAGCTCCCATTTGGGTGCTTTTTAGCAAAGTCTGTCGG
GTCAAATAAATCTCTGAGCTCAACAGCGAGACCTCTGCTTACTACCCTTG
ATCCATTCCCTTTCCCTCCCTCCCTTCCCCATCCTCCAACCATCAAAACA
GAAATACTTCCAGTTTGAAGTGGTCCAAATATGGTGATGAGATACTACCG
CTGTGGGTGGCTGACATGGACTTCCGGGCGCCACAATGTGTGATTGACGC
GATGCACGCTCGGGCCGAGCACGGCGTCTACGGCTACTCTGTTCCGAAAG
AGGAGGTGACGATGGAGGTGATAAAGTACTTGAAACGGACGGCGCATTAC
CAGGTACGCAGCAGTTTTTATCTCCTCCGGTGTTGTTTTCCTCGTGTTAT
CCTACATATTATGGGTGCATTACAGTCTTGCCATACTGTGTAGATACTGG
CACCTATCCTCACCCTTCCTTCCGTGCTTTTTCCTTTACTTTACTCTCCA
ACCACAGATTGAGCCCGACTGGATCGTCTGGAGCCATGGCCTGGTCCCTG
CGCTCACTGTCGCCGCACGCATGGCTGGTGGGCCTGGGGATAGCGTGATG
ACCAACACTCCGATCTACCCTCCCTTCCTGTGGACCCCTAAAACCGCCGA
CATGACCACACTGCAAGTGCCCCTCAAATTTGAAGGAGAGGGGGGGGGGG
GGCAATGGAGGATGGACATCGCGAAAATGGAAGAGATGGTGACGCCGACG
ACGAAAATGTTCACGCTTTGTAATCCTCACAATCCGGTGGGGAAGGTGTT
TACAATTGAGGTACGGGTGGGGGGGGTGTCGAGGGCTTCAATTATCCATC
GCCCTGCTTTTCATGTCCTTGTTTTTTCAAGGGACAGGTATATATTCTTT
CCGCCCTCCCTCCCTCCCTCCTCCCCCTCTTCACAGGAACTGCGGCAATT
GGGTTATTTCTGCAAGCGTCATGACCTCATCCTTCTCTCCGACGAGATTT
ACCACGACCTGATCCTCGACCCAGCACTCACTCCCCACGTCCCCATCGCG
GCCCTTGAAGACCCGGAGCTGATGAAAAGGACGATTATCCTCCACGCCGC
GAGCAAGACGTACAATGTGCCTGGCCTCTCATGCGCCTATGCCATCATTC
CCGACCTCGCGCTTCGGACGCGGTTCAAAAAGGCCGCAAAGGGCTTTGTG
ACAGGTGAACAAATCGTGTCTTCATTTTAATTAACAAAACGTTTCTTTTA
TTTTTCAAATCGTCTAGGCTGGTTGGCTTTCGATTCCCAAGGTTTTGGGA
AGGCTTACGCTTGCCTTTCTCTTCTCGTCGTCTTTTTGTTTTTGGTCCCC
ACTACCAGTCAAACCTTCAGTCACGCATTCCCATTACCCTCCTGCACCGG
CAACTAGAGCCAGGCATCCATATCTTCTCATCTTGCCCCCCCTCTCTCCC
TTACCCTCTCCTTCCCAAGAAATCAACGCCTTCGGGTACGAATCCTTGTA
CGCGTCTTACACCGGAGGCGAATCCTGGCGTCAGTCGATGCTTTCCTACC
TCAAGAGCAACAGGGACTTCCTCCACCACTTCTTTTCCACCCGCCTCCCC
CTCCTGAAGCCCTACCCCAACCATGACGCCACCTACCTGCTGTGGGTGGA
TACTTCTGCTTTGGCACCTTATCTCAAGCAAGGAGAGGAGGCCGCAGAAT
TCTTCATGAGAGAGGCGAAGGTGGCTGTGTCGGACGGAAGGGACTTTGGA
GCTAAGCACCACGTGAGGATTAATTTTGGATGTCCACGCGCACGACTGCT
GGAAGGGTTGGAAAAAATGGAAAAGGCCGTGAATGAGCTCGTGGCAGCCA
GAGGAAAGAAAGAGGGAAAGTGAGAAGGGATGGACCCGGGGGGGGAGGAA
GGGAGGAAGAGGATGGGAGGGAGCTGGAAAGGGTTATCTTTAATGTATGG
GAACGAG back to topCoding sequence (CDS) from alignment at scaffold_25:36789..38845- >mRNA_8048 ID=mRNA_8048|Name=jgi.p|Nanoce1779_2|602317|organism=Nannochloropsis oceanica|type=CDS|length=4452bp|location=Sequence derived from alignment at scaffold_25:36789..38845- (Nannochloropsis oceanica)
AAATCAACGCCTTCGGGTACGAATCCTTGTACGCGTCTTACACCGGAGGC
GAATCCTGGCGTCAGTCGATGCTTTCCTACCTCAAGAGCAACAGGGACTT
CCTCCACCACTTCTTTTCCACCCGCCTCCCCCTCCTGAAGCCCTACCCCA
ACCATGACGCCACCTACCTGCTGTGGGTGGATACTTCTGCTTTGGCACCT
TATCTCAAGCAAGGAGAGGAGGCCGCAGAATTCTTCATGAGAGAGGCGAA
GGTGGCTGTGTCGGACGGAAGGGACTTTGGAGCTAAGCACCACGTGAGGA
TTAATTTTGGATGTCCACGCGCACGACTGCTGGAAGGGTTGGAAAAAATG
GAAAAGGCCGTGAATGAGCTCGTGGCAGCCAGAGGAAAGAAAGAGGGAAA
GTGAGAACTGCGGCAATTGGGTTATTTCTGCAAGCGTCATGACCTCATCC
TTCTCTCCGACGAGATTTACCACGACCTGATCCTCGACCCAGCACTCACT
CCCCACGTCCCCATCGCGGCCCTTGAAGACCCGGAGCTGATGAAAAGGAC
GATTATCCTCCACGCCGCGAGCAAGACGTACAATGTGCCTGGCCTCTCAT
GCGCCTATGCCATCATTCCCGACCTCGCGCTTCGGACGCGGTTCAAAAAG
GCCGCAAAGGGCTTTGTGACAGATTGAGCCCGACTGGATCGTCTGGAGCC
ATGGCCTGGTCCCTGCGCTCACTGTCGCCGCACGCATGGCTGGTGGGCCT
GGGGATAGCGTGATGACCAACACTCCGATCTACCCTCCCTTCCTGTGGAC
CCCTAAAACCGCCGACATGACCACACTGCAAGTGCCCCTCAAATTTGAAG
GAGAGGGGGGGGGGGGGCAATGGAGGATGGACATCGCGAAAATGGAAGAG
ATGGTGACGCCGACGACGAAAATGTTCACGCTTTGTAATCCTCACAATCC
GGTGGGGAAGGTGTTTACAATTGAGATGGACTTCCGGGCGCCACAATGTG
TGATTGACGCGATGCACGCTCGGGCCGAGCACGGCGTCTACGGCTACTCT
GTTCCGAAAGAGGAGGTGACGATGGAGGTGATAAAGTACTTGAAACGGAC
GGCGCATTACCAGAAATCAACGCCTTCGGGTACGAATCCTTGTACGCGTC
TTACACCGGAGGCGAATCCTGGCGTCAGTCGATGCTTTCCTACCTCAAGA
GCAACAGGGACTTCCTCCACCACTTCTTTTCCACCCGCCTCCCCCTCCTG
AAGCCCTACCCCAACCATGACGCCACCTACCTGCTGTGGGTGGATACTTC
TGCTTTGGCACCTTATCTCAAGCAAGGAGAGGAGGCCGCAGAATTCTTCA
TGAGAGAGGCGAAGGTGGCTGTGTCGGACGGAAGGGACTTTGGAGCTAAG
CACCACGTGAGGATTAATTTTGGATGTCCACGCGCACGACTGCTGGAAGG
GTTGGAAAAAATGGAAAAGGCCGTGAATGAGCTCGTGGCAGCCAGAGGAA
AGAAAGAGGGAAAGTGAGAACTGCGGCAATTGGGTTATTTCTGCAAGCGT
CATGACCTCATCCTTCTCTCCGACGAGATTTACCACGACCTGATCCTCGA
CCCAGCACTCACTCCCCACGTCCCCATCGCGGCCCTTGAAGACCCGGAGC
TGATGAAAAGGACGATTATCCTCCACGCCGCGAGCAAGACGTACAATGTG
CCTGGCCTCTCATGCGCCTATGCCATCATTCCCGACCTCGCGCTTCGGAC
GCGGTTCAAAAAGGCCGCAAAGGGCTTTGTGACAGATTGAGCCCGACTGG
ATCGTCTGGAGCCATGGCCTGGTCCCTGCGCTCACTGTCGCCGCACGCAT
GGCTGGTGGGCCTGGGGATAGCGTGATGACCAACACTCCGATCTACCCTC
CCTTCCTGTGGACCCCTAAAACCGCCGACATGACCACACTGCAAGTGCCC
CTCAAATTTGAAGGAGAGGGGGGGGGGGGGCAATGGAGGATGGACATCGC
GAAAATGGAAGAGATGGTGACGCCGACGACGAAAATGTTCACGCTTTGTA
ATCCTCACAATCCGGTGGGGAAGGTGTTTACAATTGAGATGGACTTCCGG
GCGCCACAATGTGTGATTGACGCGATGCACGCTCGGGCCGAGCACGGCGT
CTACGGCTACTCTGTTCCGAAAGAGGAGGTGACGATGGAGGTGATAAAGT
ACTTGAAACGGACGGCGCATTACCAGAAATCAACGCCTTCGGGTACGAAT
CCTTGTACGCGTCTTACACCGGAGGCGAATCCTGGCGTCAGTCGATGCTT
TCCTACCTCAAGAGCAACAGGGACTTCCTCCACCACTTCTTTTCCACCCG
CCTCCCCCTCCTGAAGCCCTACCCCAACCATGACGCCACCTACCTGCTGT
GGGTGGATACTTCTGCTTTGGCACCTTATCTCAAGCAAGGAGAGGAGGCC
GCAGAATTCTTCATGAGAGAGGCGAAGGTGGCTGTGTCGGACGGAAGGGA
CTTTGGAGCTAAGCACCACGTGAGGATTAATTTTGGATGTCCACGCGCAC
GACTGCTGGAAGGGTTGGAAAAAATGGAAAAGGCCGTGAATGAGCTCGTG
GCAGCCAGAGGAAAGAAAGAGGGAAAGTGAGAACTGCGGCAATTGGGTTA
TTTCTGCAAGCGTCATGACCTCATCCTTCTCTCCGACGAGATTTACCACG
ACCTGATCCTCGACCCAGCACTCACTCCCCACGTCCCCATCGCGGCCCTT
GAAGACCCGGAGCTGATGAAAAGGACGATTATCCTCCACGCCGCGAGCAA
GACGTACAATGTGCCTGGCCTCTCATGCGCCTATGCCATCATTCCCGACC
TCGCGCTTCGGACGCGGTTCAAAAAGGCCGCAAAGGGCTTTGTGACAGAT
TGAGCCCGACTGGATCGTCTGGAGCCATGGCCTGGTCCCTGCGCTCACTG
TCGCCGCACGCATGGCTGGTGGGCCTGGGGATAGCGTGATGACCAACACT
CCGATCTACCCTCCCTTCCTGTGGACCCCTAAAACCGCCGACATGACCAC
ACTGCAAGTGCCCCTCAAATTTGAAGGAGAGGGGGGGGGGGGGCAATGGA
GGATGGACATCGCGAAAATGGAAGAGATGGTGACGCCGACGACGAAAATG
TTCACGCTTTGTAATCCTCACAATCCGGTGGGGAAGGTGTTTACAATTGA
GATGGACTTCCGGGCGCCACAATGTGTGATTGACGCGATGCACGCTCGGG
CCGAGCACGGCGTCTACGGCTACTCTGTTCCGAAAGAGGAGGTGACGATG
GAGGTGATAAAGTACTTGAAACGGACGGCGCATTACCAGAAATCAACGCC
TTCGGGTACGAATCCTTGTACGCGTCTTACACCGGAGGCGAATCCTGGCG
TCAGTCGATGCTTTCCTACCTCAAGAGCAACAGGGACTTCCTCCACCACT
TCTTTTCCACCCGCCTCCCCCTCCTGAAGCCCTACCCCAACCATGACGCC
ACCTACCTGCTGTGGGTGGATACTTCTGCTTTGGCACCTTATCTCAAGCA
AGGAGAGGAGGCCGCAGAATTCTTCATGAGAGAGGCGAAGGTGGCTGTGT
CGGACGGAAGGGACTTTGGAGCTAAGCACCACGTGAGGATTAATTTTGGA
TGTCCACGCGCACGACTGCTGGAAGGGTTGGAAAAAATGGAAAAGGCCGT
GAATGAGCTCGTGGCAGCCAGAGGAAAGAAAGAGGGAAAGTGAGAACTGC
GGCAATTGGGTTATTTCTGCAAGCGTCATGACCTCATCCTTCTCTCCGAC
GAGATTTACCACGACCTGATCCTCGACCCAGCACTCACTCCCCACGTCCC
CATCGCGGCCCTTGAAGACCCGGAGCTGATGAAAAGGACGATTATCCTCC
ACGCCGCGAGCAAGACGTACAATGTGCCTGGCCTCTCATGCGCCTATGCC
ATCATTCCCGACCTCGCGCTTCGGACGCGGTTCAAAAAGGCCGCAAAGGG
CTTTGTGACAGATTGAGCCCGACTGGATCGTCTGGAGCCATGGCCTGGTC
CCTGCGCTCACTGTCGCCGCACGCATGGCTGGTGGGCCTGGGGATAGCGT
GATGACCAACACTCCGATCTACCCTCCCTTCCTGTGGACCCCTAAAACCG
CCGACATGACCACACTGCAAGTGCCCCTCAAATTTGAAGGAGAGGGGGGG
GGGGGGCAATGGAGGATGGACATCGCGAAAATGGAAGAGATGGTGACGCC
GACGACGAAAATGTTCACGCTTTGTAATCCTCACAATCCGGTGGGGAAGG
TGTTTACAATTGAGATGGACTTCCGGGCGCCACAATGTGTGATTGACGCG
ATGCACGCTCGGGCCGAGCACGGCGTCTACGGCTACTCTGTTCCGAAAGA
GGAGGTGACGATGGAGGTGATAAAGTACTTGAAACGGACGGCGCATTACC
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