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Properties
| Property Name | Value |
| TranscriptId | 667887 |
| Track | FilteredModels2 |
| ProteinId | 667801 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_2 | supercontig | scaffold_2:469055..472127 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_804 ID=mRNA_804|Name=jgi.p|Nanoce1779_2|667801|organism=Nannochloropsis oceanica|type=mRNA|length=3073bp GACCGATGATTACAATATCACCATCTCCTCCTCCCCTCTCCACCACCACA CCATTCACCAGACTCTCCCGTCCCCCACAACCACAACAACAATAGAAAGC TAGTACCATCATACGCCAAGCTGAAGCTTGCAACAGCAGCAGCAACAGCA CCGCCAGCACTAGCATGAGCCACTACGGCGGCGGAAACTACGGACCACCG CAGGGAGGCGGAAGAGGCGGGTATCAAGGAGGAGGCGGCGACCGCAAACG TTACCGTGGGGACGACTACCAGGGCGGCGGTGGAGGAGGTAGAGGTGGGC ACTATGGCGGAAGTGGGGGTGGTGGGCGCTATCGTAGCGGCGGTGGTGGA CGGCACCAAGACCGTCGAGGGGGAGACAGGGGCCCGCCGGCCAAGAAGCC CAAGACCAAGGAGGACGAGATCAAGGCGCAGATGAAAGCACTCTTGGTGC GTGTCGGGGACTTCCATCACATAAGCACATCACTTTCGAGTCTGGAAGAG AACGTCGAGGGGTTGGCGGGGGCGTTGGGGGACGAGCTGGCAACTTTTGG GGACTTTGTCGCTGACTTTGTCTTGACGGCTGCGGGACAATTGTCGTTAC AAACCCCTGTGTACGCCACCCTGGTGGGGTTGCTTAATGCACGCGACGAG GAGTTCGGGGCAAAGGTAGTTAAGGGCGGTGCGGTGCGGTTGGACGCGAT GATTCGGCAGGGTCGGTGGGTGAACGCCAAGCTGGTGTTGCGCTTTCTGG CCGAGTTGGTCAACGCGCGTGTGGTCAAGGCAGATGGAGAGGGAAGCCTA GGTGAGCTCCTGACAACGTTGCTGGGGCCTTTGAATGAGCCCGATGAAAC TGTTCCGCCGGGGAGGAAAGATTTGTACTTGTACTTGGTTGTCTCGGTGT TGCCGTGGGTGTGGGATGCCTTGGCGAAGGAGTGGCCTGATGGATTACCT GCACTATTGGAGACGGCTTTTGCTTATGGGGATCGACGTGTGCCTTTGTT CAAAAAGCAGGGCGTGCGTTGCGTGCTTGAGGCTGGCTTGGACGACGAGG ATGAGGAGAAAGATGACGAGTCAGAGCCGGCGCAAGATTCGATTCAAACG GCTCTGGGGGTAGCGAAGGCCCTGGCTGCCACCCTGGACGAAGCTCAAGA ATCCATTGAAATCAACTCCATAGTCAAGCCGTGGAGGAGCGTCAAAGACG ATCTCGCCCAAGGCATCCGACACACCATCCCCATCATCGTTCTGCCAGAC CCTGACCCCCCCGCCTTAGCCGCAGGCGCCTTCCCCCTCCCCCTCCACCC CTGCTTCGCGGAGTTCGATCTTTTCGATGCAGAGAGCGGCGGACAAGCTG CCTCCGTTGCTGCCCTCGGTGAAATCGAGCGCTGGGTCCTCCGAGAGTAC CTCAAGGACAGCCTTGTGACCTTCCGCCCATTTGTCAATGAAGCAGGGAA CAAGCGAGGCTCCTTTGTCGCTGAAGTCGAACAGCTTTATTCTATCTCTT ACCTTGCCCCTCCCGATGTTGCCACGGAGCACCTCGTTGCCGAGGCCTTG CTCCTGTGGCTGCTGCAGCGTCCAGGACGTGACTTGGCGTACCTCCATCG GTTGTTGCTTCAAGTGGTCCAGACGCCCAAGGCGGCCGGCTCCTTGGCAT TAGGGCTGCATTTATTGTTTCAAGACAATTTGGACGTGCTAGATCACGGG GCAATCGTGCAGCTGGCGGATTGGTTTGGCGCCCACTTAACCAACACCTC GTTTGTCTTCCCCTACTGGGATGCGTGGGCGGGGCTGCTTGCGGAGCAGG AGGGGGAGGAGGGAGGGGAAGATAGCCCACAGCAGTTTTTCTTGAGACGG GTGTTGGACGTGGCAGCGAGGCAGACTTATGTGGCAAAGGTGAAGGAGCA CGTCCCTTCCTCCCTGCATGCGTATGTGCCCGGGGACCCTTACTCCCTGT CACCGTACCTCGCGCGTGAGGCGGCGGTGGAGGAGAACGTGGAGACAGAT TCGCCCCCGACTCGTATCTTGAAGGAGCTGGTACGTCACTTTCGGGCTGT GCTACAGGGAGAGATCTCTCCGAGCGAGGTACAAGACTGGCTCGATAATG TCGCCAATCCTCCTGCAGAGCTTGCGGCGAGGGATCCGTATTGGAGAGTG ACGTTGGTGACGCATGCCTTGTCGAGGATTAGCGACGACACGGTGGCACA CTTGCCGGCGTTGCTTGAAAAGTGCTTGGGCTGGTTCAGGGTATTGTTTG AAGCGGACGAGCACCAGCTTAGGATGGTGGAGGCCTTTTCGGAGGTTTGG GTTGGGTCGCCACAGATGTTGCTGTTGGCGTTGAATGCCGTGATGAGGAT GCATATGGTGTTGCCGGTTAATGTCATGGGGTGGTTGGTGAGACCGGAGG TGGCAAGGAGGTATGGCAGGGATGGGTTGTACTGTGATTTGTTTTCGGAC GCCATCGACAGGTCTTTGGAATCGGTCGCCGTGTACGGTGAGTTGATTAA GAGGGCATTGGGACCTCATCCACCTGTGGCTGAACAGGGTGAGGAGGCAC GGGCGAGGCAATTGGCGGGGGAGGAGACGATGGAGCATGGAGTGGTGGCA GTTGAAAATGCGCAGGATTTGGTTTTGGAGCTGGTGGAGGGGTTATGCAA GGTCTTGGCAGAGGGGTTGGGATCGGAGGAGGAAAAGGGAAAGGAGTGGG TGAGGGCGGGATTGAGTTATTTGAGGGGGAGTTTGCAGACGTTTTTGAAG TTGGAGGAGAAGGGGGTGAATAGGGCGATTCCCGGGACGGAGGCTGTCTT TGACATGGAGAAGGTGGAGGAGGCGGTGGGGGATCTGGAGGCGGTGCCCG CTGCGTTGCAGGAAGTGCTGAAGGATTCACGGAGATATGTGGAGGAGAGG CAGGTTTTGGGGGGAGGATTTTCTCATGGGCAGGTGTTCACTGATGAGGA GTAAAGAAGGAGTTTAGTGTGGGAGGGAATATGGAAGATTAGAGGAAGGT GATGTAAGAAGCAGTAAAGTGTGGAAGGGTGAAAGAGGGGGATATAAAGA ACAAAAGCAATGGATAACATTTG back to topprotein sequence of jgi.p|Nanoce1779_2|667801 >mRNA_804-protein ID=mRNA_804-protein|Name=jgi.p|Nanoce1779_2|667801|organism=Nannochloropsis oceanica|type=polypeptide|length=930bp MSHYGGGNYGPPQGGGRGGYQGGGGDRKRYRGDDYQGGGGGGRGGHYGGS GGGGRYRSGGGGRHQDRRGGDRGPPAKKPKTKEDEIKAQMKALLVRVGDF HHISTSLSSLEENVEGLAGALGDELATFGDFVADFVLTAAGQLSLQTPVY ATLVGLLNARDEEFGAKVVKGGAVRLDAMIRQGRWVNAKLVLRFLAELVN ARVVKADGEGSLGELLTTLLGPLNEPDETVPPGRKDLYLYLVVSVLPWVW DALAKEWPDGLPALLETAFAYGDRRVPLFKKQGVRCVLEAGLDDEDEEKD DESEPAQDSIQTALGVAKALAATLDEAQESIEINSIVKPWRSVKDDLAQG IRHTIPIIVLPDPDPPALAAGAFPLPLHPCFAEFDLFDAESGGQAASVAA LGEIERWVLREYLKDSLVTFRPFVNEAGNKRGSFVAEVEQLYSISYLAPP DVATEHLVAEALLLWLLQRPGRDLAYLHRLLLQVVQTPKAAGSLALGLHL LFQDNLDVLDHGAIVQLADWFGAHLTNTSFVFPYWDAWAGLLAEQEGEEG GEDSPQQFFLRRVLDVAARQTYVAKVKEHVPSSLHAYVPGDPYSLSPYLA REAAVEENVETDSPPTRILKELVRHFRAVLQGEISPSEVQDWLDNVANPP AELAARDPYWRVTLVTHALSRISDDTVAHLPALLEKCLGWFRVLFEADEH QLRMVEAFSEVWVGSPQMLLLALNAVMRMHMVLPVNVMGWLVRPEVARRY GRDGLYCDLFSDAIDRSLESVAVYGELIKRALGPHPPVAEQGEEARARQL AGEETMEHGVVAVENAQDLVLELVEGLCKVLAEGLGSEEEKGKEWVRAGL SYLRGSLQTFLKLEEKGVNRAIPGTEAVFDMEKVEEAVGDLEAVPAALQE VLKDSRRYVEERQVLGGGFSHGQVFTDEE* back to topmRNA from alignment at scaffold_2:469055..472127+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_804 ID=mRNA_804|Name=jgi.p|Nanoce1779_2|667801|organism=Nannochloropsis oceanica|type=mRNA|length=3073bp|location=Sequence derived from alignment at scaffold_2:469055..472127+ (Nannochloropsis oceanica) GACCGATGATTACAATATCACCATCTCCTCCTCCCCTCTCCACCACCACA
CCATTCACCAGACTCTCCCGTCCCCCACAACCACAACAACAATAGAAAGC
TAGTACCATCATACGCCAAGCTGAAGCTTGCAACAGCAGCAGCAACAGCA
CCGCCAGCACTAGCATGAGCCACTACGGCGGCGGAAACTACGGACCACCG
CAGGGAGGCGGAAGAGGCGGGTATCAAGGAGGAGGCGGCGACCGCAAACG
TTACCGTGGGGACGACTACCAGGGCGGCGGTGGAGGAGGTAGAGGTGGGC
ACTATGGCGGAAGTGGGGGTGGTGGGCGCTATCGTAGCGGCGGTGGTGGA
CGGCACCAAGACCGTCGAGGGGGAGACAGGGGCCCGCCGGCCAAGAAGCC
CAAGACCAAGGAGGACGAGATCAAGGCGCAGATGAAAGCACTCTTGGTGC
GTGTCGGGGACTTCCATCACATAAGCACATCACTTTCGAGTCTGGAAGAG
AACGTCGAGGGGTTGGCGGGGGCGTTGGGGGACGAGCTGGCAACTTTTGG
GGACTTTGTCGCTGACTTTGTCTTGACGGCTGCGGGACAATTGTCGTTAC
AAACCCCTGTGTACGCCACCCTGGTGGGGTTGCTTAATGCACGCGACGAG
GAGTTCGGGGCAAAGGTAGTTAAGGGCGGTGCGGTGCGGTTGGACGCGAT
GATTCGGCAGGGTCGGTGGGTGAACGCCAAGCTGGTGTTGCGCTTTCTGG
CCGAGTTGGTCAACGCGCGTGTGGTCAAGGCAGATGGAGAGGGAAGCCTA
GGTGAGCTCCTGACAACGTTGCTGGGGCCTTTGAATGAGCCCGATGAAAC
TGTTCCGCCGGGGAGGAAAGATTTGTACTTGTACTTGGTTGTCTCGGTGT
TGCCGTGGGTGTGGGATGCCTTGGCGAAGGAGTGGCCTGATGGATTACCT
GCACTATTGGAGACGGCTTTTGCTTATGGGGATCGACGTGTGCCTTTGTT
CAAAAAGCAGGGCGTGCGTTGCGTGCTTGAGGCTGGCTTGGACGACGAGG
ATGAGGAGAAAGATGACGAGTCAGAGCCGGCGCAAGATTCGATTCAAACG
GCTCTGGGGGTAGCGAAGGCCCTGGCTGCCACCCTGGACGAAGCTCAAGA
ATCCATTGAAATCAACTCCATAGTCAAGCCGTGGAGGAGCGTCAAAGACG
ATCTCGCCCAAGGCATCCGACACACCATCCCCATCATCGTTCTGCCAGAC
CCTGACCCCCCCGCCTTAGCCGCAGGCGCCTTCCCCCTCCCCCTCCACCC
CTGCTTCGCGGAGTTCGATCTTTTCGATGCAGAGAGCGGCGGACAAGCTG
CCTCCGTTGCTGCCCTCGGTGAAATCGAGCGCTGGGTCCTCCGAGAGTAC
CTCAAGGACAGCCTTGTGACCTTCCGCCCATTTGTCAATGAAGCAGGGAA
CAAGCGAGGCTCCTTTGTCGCTGAAGTCGAACAGCTTTATTCTATCTCTT
ACCTTGCCCCTCCCGATGTTGCCACGGAGCACCTCGTTGCCGAGGCCTTG
CTCCTGTGGCTGCTGCAGCGTCCAGGACGTGACTTGGCGTACCTCCATCG
GTTGTTGCTTCAAGTGGTCCAGACGCCCAAGGCGGCCGGCTCCTTGGCAT
TAGGGCTGCATTTATTGTTTCAAGACAATTTGGACGTGCTAGATCACGGG
GCAATCGTGCAGCTGGCGGATTGGTTTGGCGCCCACTTAACCAACACCTC
GTTTGTCTTCCCCTACTGGGATGCGTGGGCGGGGCTGCTTGCGGAGCAGG
AGGGGGAGGAGGGAGGGGAAGATAGCCCACAGCAGTTTTTCTTGAGACGG
GTGTTGGACGTGGCAGCGAGGCAGACTTATGTGGCAAAGGTGAAGGAGCA
CGTCCCTTCCTCCCTGCATGCGTATGTGCCCGGGGACCCTTACTCCCTGT
CACCGTACCTCGCGCGTGAGGCGGCGGTGGAGGAGAACGTGGAGACAGAT
TCGCCCCCGACTCGTATCTTGAAGGAGCTGGTACGTCACTTTCGGGCTGT
GCTACAGGGAGAGATCTCTCCGAGCGAGGTACAAGACTGGCTCGATAATG
TCGCCAATCCTCCTGCAGAGCTTGCGGCGAGGGATCCGTATTGGAGAGTG
ACGTTGGTGACGCATGCCTTGTCGAGGATTAGCGACGACACGGTGGCACA
CTTGCCGGCGTTGCTTGAAAAGTGCTTGGGCTGGTTCAGGGTATTGTTTG
AAGCGGACGAGCACCAGCTTAGGATGGTGGAGGCCTTTTCGGAGGTTTGG
GTTGGGTCGCCACAGATGTTGCTGTTGGCGTTGAATGCCGTGATGAGGAT
GCATATGGTGTTGCCGGTTAATGTCATGGGGTGGTTGGTGAGACCGGAGG
TGGCAAGGAGGTATGGCAGGGATGGGTTGTACTGTGATTTGTTTTCGGAC
GCCATCGACAGGTCTTTGGAATCGGTCGCCGTGTACGGTGAGTTGATTAA
GAGGGCATTGGGACCTCATCCACCTGTGGCTGAACAGGGTGAGGAGGCAC
GGGCGAGGCAATTGGCGGGGGAGGAGACGATGGAGCATGGAGTGGTGGCA
GTTGAAAATGCGCAGGATTTGGTTTTGGAGCTGGTGGAGGGGTTATGCAA
GGTCTTGGCAGAGGGGTTGGGATCGGAGGAGGAAAAGGGAAAGGAGTGGG
TGAGGGCGGGATTGAGTTATTTGAGGGGGAGTTTGCAGACGTTTTTGAAG
TTGGAGGAGAAGGGGGTGAATAGGGCGATTCCCGGGACGGAGGCTGTCTT
TGACATGGAGAAGGTGGAGGAGGCGGTGGGGGATCTGGAGGCGGTGCCCG
CTGCGTTGCAGGAAGTGCTGAAGGATTCACGGAGATATGTGGAGGAGAGG
CAGGTTTTGGGGGGAGGATTTTCTCATGGGCAGGTGTTCACTGATGAGGA
GTAAAGAAGGAGTTTAGTGTGGGAGGGAATATGGAAGATTAGAGGAAGGT
GATGTAAGAAGCAGTAAAGTGTGGAAGGGTGAAAGAGGGGGATATAAAGA
ACAAAAGCAATGGATAACATTTG back to topCoding sequence (CDS) from alignment at scaffold_2:469055..472127+ >mRNA_804 ID=mRNA_804|Name=jgi.p|Nanoce1779_2|667801|organism=Nannochloropsis oceanica|type=CDS|length=2790bp|location=Sequence derived from alignment at scaffold_2:469055..472127+ (Nannochloropsis oceanica) ATGAGCCACTACGGCGGCGGAAACTACGGACCACCGCAGGGAGGCGGAAG AGGCGGGTATCAAGGAGGAGGCGGCGACCGCAAACGTTACCGTGGGGACG ACTACCAGGGCGGCGGTGGAGGAGGTAGAGGTGGGCACTATGGCGGAAGT GGGGGTGGTGGGCGCTATCGTAGCGGCGGTGGTGGACGGCACCAAGACCG TCGAGGGGGAGACAGGGGCCCGCCGGCCAAGAAGCCCAAGACCAAGGAGG ACGAGATCAAGGCGCAGATGAAAGCACTCTTGGTGCGTGTCGGGGACTTC CATCACATAAGCACATCACTTTCGAGTCTGGAAGAGAACGTCGAGGGGTT GGCGGGGGCGTTGGGGGACGAGCTGGCAACTTTTGGGGACTTTGTCGCTG ACTTTGTCTTGACGGCTGCGGGACAATTGTCGTTACAAACCCCTGTGTAC GCCACCCTGGTGGGGTTGCTTAATGCACGCGACGAGGAGTTCGGGGCAAA GGTAGTTAAGGGCGGTGCGGTGCGGTTGGACGCGATGATTCGGCAGGGTC GGTGGGTGAACGCCAAGCTGGTGTTGCGCTTTCTGGCCGAGTTGGTCAAC GCGCGTGTGGTCAAGGCAGATGGAGAGGGAAGCCTAGGTGAGCTCCTGAC AACGTTGCTGGGGCCTTTGAATGAGCCCGATGAAACTGTTCCGCCGGGGA GGAAAGATTTGTACTTGTACTTGGTTGTCTCGGTGTTGCCGTGGGTGTGG GATGCCTTGGCGAAGGAGTGGCCTGATGGATTACCTGCACTATTGGAGAC GGCTTTTGCTTATGGGGATCGACGTGTGCCTTTGTTCAAAAAGCAGGGCG TGCGTTGCGTGCTTGAGGCTGGCTTGGACGACGAGGATGAGGAGAAAGAT GACGAGTCAGAGCCGGCGCAAGATTCGATTCAAACGGCTCTGGGGGTAGC GAAGGCCCTGGCTGCCACCCTGGACGAAGCTCAAGAATCCATTGAAATCA ACTCCATAGTCAAGCCGTGGAGGAGCGTCAAAGACGATCTCGCCCAAGGC ATCCGACACACCATCCCCATCATCGTTCTGCCAGACCCTGACCCCCCCGC CTTAGCCGCAGGCGCCTTCCCCCTCCCCCTCCACCCCTGCTTCGCGGAGT TCGATCTTTTCGATGCAGAGAGCGGCGGACAAGCTGCCTCCGTTGCTGCC CTCGGTGAAATCGAGCGCTGGGTCCTCCGAGAGTACCTCAAGGACAGCCT TGTGACCTTCCGCCCATTTGTCAATGAAGCAGGGAACAAGCGAGGCTCCT TTGTCGCTGAAGTCGAACAGCTTTATTCTATCTCTTACCTTGCCCCTCCC GATGTTGCCACGGAGCACCTCGTTGCCGAGGCCTTGCTCCTGTGGCTGCT GCAGCGTCCAGGACGTGACTTGGCGTACCTCCATCGGTTGTTGCTTCAAG TGGTCCAGACGCCCAAGGCGGCCGGCTCCTTGGCATTAGGGCTGCATTTA TTGTTTCAAGACAATTTGGACGTGCTAGATCACGGGGCAATCGTGCAGCT GGCGGATTGGTTTGGCGCCCACTTAACCAACACCTCGTTTGTCTTCCCCT ACTGGGATGCGTGGGCGGGGCTGCTTGCGGAGCAGGAGGGGGAGGAGGGA GGGGAAGATAGCCCACAGCAGTTTTTCTTGAGACGGGTGTTGGACGTGGC AGCGAGGCAGACTTATGTGGCAAAGGTGAAGGAGCACGTCCCTTCCTCCC TGCATGCGTATGTGCCCGGGGACCCTTACTCCCTGTCACCGTACCTCGCG CGTGAGGCGGCGGTGGAGGAGAACGTGGAGACAGATTCGCCCCCGACTCG TATCTTGAAGGAGCTGGTACGTCACTTTCGGGCTGTGCTACAGGGAGAGA TCTCTCCGAGCGAGGTACAAGACTGGCTCGATAATGTCGCCAATCCTCCT GCAGAGCTTGCGGCGAGGGATCCGTATTGGAGAGTGACGTTGGTGACGCA TGCCTTGTCGAGGATTAGCGACGACACGGTGGCACACTTGCCGGCGTTGC TTGAAAAGTGCTTGGGCTGGTTCAGGGTATTGTTTGAAGCGGACGAGCAC CAGCTTAGGATGGTGGAGGCCTTTTCGGAGGTTTGGGTTGGGTCGCCACA GATGTTGCTGTTGGCGTTGAATGCCGTGATGAGGATGCATATGGTGTTGC CGGTTAATGTCATGGGGTGGTTGGTGAGACCGGAGGTGGCAAGGAGGTAT GGCAGGGATGGGTTGTACTGTGATTTGTTTTCGGACGCCATCGACAGGTC TTTGGAATCGGTCGCCGTGTACGGTGAGTTGATTAAGAGGGCATTGGGAC CTCATCCACCTGTGGCTGAACAGGGTGAGGAGGCACGGGCGAGGCAATTG GCGGGGGAGGAGACGATGGAGCATGGAGTGGTGGCAGTTGAAAATGCGCA GGATTTGGTTTTGGAGCTGGTGGAGGGGTTATGCAAGGTCTTGGCAGAGG GGTTGGGATCGGAGGAGGAAAAGGGAAAGGAGTGGGTGAGGGCGGGATTG AGTTATTTGAGGGGGAGTTTGCAGACGTTTTTGAAGTTGGAGGAGAAGGG GGTGAATAGGGCGATTCCCGGGACGGAGGCTGTCTTTGACATGGAGAAGG TGGAGGAGGCGGTGGGGGATCTGGAGGCGGTGCCCGCTGCGTTGCAGGAA GTGCTGAAGGATTCACGGAGATATGTGGAGGAGAGGCAGGTTTTGGGGGG AGGATTTTCTCATGGGCAGGTGTTCACTGATGAGGAGTAA back to top
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