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Properties
| Property Name | Value |
|---|
| TranscriptId | 182361 |
| Track | FilteredModels2 |
| ProteinId | 182275 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_22 | supercontig | scaffold_22:416882..418268 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8007 ID=mRNA_8007|Name=jgi.p|Nanoce1779_2|182275|organism=Nannochloropsis oceanica|type=mRNA|length=902bp
CCCTTCCTCCTTCCATTCCTCACTCCTTCCTTCTTCAGGTGCTTCCGCAA
CTGCCTCAAGTGTCAGATCCAGAATGTAGCCGATGTGCGCAAGCCAACCC
GTCCTCCCTCCATCCCTCCTTCCCTCTCTCCCTCCGCCGTGCCGATGGGA
GCCCAAATGGCTTGCGAGCCAGGGAAGGTATTGGCAAGGGGGTGGTGGGG
AGGGAGGGAAGGAGGGAGGGAAGGAGGGCGATGTATAATTGTAAAGGCAC
CTTCACCCTCTCTATTATCACTCACTCACTTATTCTTTTTTTTCATTTTT
TAAATTATCCTCATGATTCATATGTTTTATTTGGGGCCTCAGCCACCGGG
CTCTAGTCACAAGAAGGAGTATGGAGGAGGGGATGGAGAGGAAGAGCTGA
AAGGAGGAGGTGATGATGGTTGTGGTGGTGGTGGTGGAGGAGGAGAAGGT
GATGGTGGTGGAGGAGGAGGAGAAGAAGGAGGAGGAGAAGAAGACAGGGG
GAAAGAGAGAGTGAAGGAGGAGGAGGAGGCGGAGGAGTACGACGAGGAGG
AGAGAGGGGAGGGGCGAGGCGCTCCTTACCTTGACCTTGTCTTTCACCGA
CATGAGCCTCAGGCAGCCGTTACTTTATTGCTGGATGCCGTTGTGGTGGC
CCAAAAGGAAGGGAGGATCGACAGAGAGAGGGTGCGGCGTGTGCTCCAAG
GGTGGCAAATACAATCACTTCTCGCGGAGCAGGATATCTCTTGGGGCAGT
AGTCAGGCCATCCAAAGTATCACAGGCCTGGACGCTGACGAGGTGGAAGG
AGGTAAATTGCTTCCTTTGTCGGCACCCTCACCCGTCCGGTAGGTAGGAA
GGAGGGAGAAAGAAGGAGGGAGAACGAGGAGGGAAGCTTAGGAAAAGATT
GA back to topprotein sequence of jgi.p|Nanoce1779_2|182275 >mRNA_8007-protein ID=mRNA_8007-protein|Name=jgi.p|Nanoce1779_2|182275|organism=Nannochloropsis oceanica|type=polypeptide|length=177bp
MIHMFYLGPQPPGSSHKKEYGGGDGEEELKGGGDDGCGGGGGGGEGDGGG
GGGEEGGGEEDRGKERVKEEEEAEEYDEEERGEGRGAPYLDLVFHRHEPQ
AAVTLLLDAVVVAQKEGRIDRERVRRVLQGWQIQSLLAEQDISWGSSQAI
QSITGLDADEVEGGKLLPLSAPSPVR* back to topmRNA from alignment at scaffold_22:416882..418268- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8007 ID=mRNA_8007|Name=jgi.p|Nanoce1779_2|182275|organism=Nannochloropsis oceanica|type=mRNA|length=1387bp|location=Sequence derived from alignment at scaffold_22:416882..418268- (Nannochloropsis oceanica)
CCCTTCCTCCTTCCATTCCTCACTCCTTCCTTCTTCAGGTGCTTCCGCAA
CTGCCTCAAGTGTCAGATCCAGAATGTAGCCGATGTGCGCAAGCCAACCC
GTCCTCCCTCCATCCCTCCTTCCCTCTCTCCCTCCGCCGTGCCGATGGGA
GCCCAAATGGCTTGCGAGCCAGGGAAGGTATTGGCAAGGGGGTGGTGGGG
AGGGAGGGAAGGAGGGAGGGAAGGAGGGCGATGTATAATTGTAAAGGCAC
CTTCACCCTCTCTATTATCACTCACTCACTTATTCTTTTTTTTCATTTTT
TAAATTATCCTCATGATTCATATGTTTTATTTGGGGCCTCAGCCACCGGG
CTCTAGTCACAAGAAGGAGTATGGAGGAGGGGATGGAGAGGAAGAGCTGA
AAGGAGGAGGTGATGATGGTTGTGGTGGTGGTGGTGGAGGAGGAGAAGGT
GATGGTGGTGGAGGAGGAGGAGAAGAAGGAGGAGGAGAAGAAGACAGGGG
GAAAGAGAGAGTGAAGGAGGAGGAGGAGGCGGAGGAGTACGACGAGGAGG
AGAGAGGGGAGGGGCGAGGCGCTCCTTACCTTGACCTTGTCTTTCACCGA
CATGAGCCTCAGGCAGCCGTTACTTTATTGCTGGATGCCGTTGTGGTGGC
CCAAAAGGAAGGGAGGATCGACAGAGAGAGGGTGCGGCGTGTGCTGTGAG
TAGGGAGTGAGGGAGGGAGGAAGTGAGGGGGGAAGGAGGGGGGGAGGGAG
CGAGGGAAAAGGAGGGGAGAATTATAGAGAGAGGGTGCGGCGATGACCAT
GAGGAGGGAGGAAGGGAGGGACGGAGGGAGGAGGAAGAAGGAGGGGACAG
AGAAGAGTGAGCATCCTGCCTTCACACTCATCATTCTTAAAACACACACT
CTGGCCTTCATTTGATAACGCAGCGCCCCTCCCTCCTCCCCCTTTCCTCC
CCCTCCAACTCCAAGCCCTAAAGTAGAGCGCGAAGCTCACCCCTCCCTCC
CTCCCCCCCTCCTCCCCTCCTTTCCTTTCAGCCAAGGGTGGCAAATACAA
TCACTTCTCGCGGAGCAGGATATCTCTTGGGGCAGTAGTCAGGCCATCCA
AAGTATCACAGGCCTGGACGCTGACGAGGTACGCCCTCCCTCCCTCCCTC
CCTCCATCTCTCTTTCCTTGTCCATGGCACCACACACATGCACCCATTTT
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCTTCCCTTCTTCAGGTGGAAGGAGGTAAATTGCTTCC
TTTGTCGGCACCCTCACCCGTCCGGTAGGTAGGAAGGAGGGAGAAAGAAG
GAGGGAGAACGAGGAGGGAAGCTTAGGAAAAGATTGA back to topCoding sequence (CDS) from alignment at scaffold_22:416882..418268- >mRNA_8007 ID=mRNA_8007|Name=jgi.p|Nanoce1779_2|182275|organism=Nannochloropsis oceanica|type=CDS|length=1593bp|location=Sequence derived from alignment at scaffold_22:416882..418268- (Nannochloropsis oceanica)
GTGGAAGGAGGTAAATTGCTTCCTTTGTCGGCACCCTCACCCGTCCGGTA
GCCAAGGGTGGCAAATACAATCACTTCTCGCGGAGCAGGATATCTCTTGG
GGCAGTAGTCAGGCCATCCAAAGTATCACAGGCCTGGACGCTGACGAGAT
GATTCATATGTTTTATTTGGGGCCTCAGCCACCGGGCTCTAGTCACAAGA
AGGAGTATGGAGGAGGGGATGGAGAGGAAGAGCTGAAAGGAGGAGGTGAT
GATGGTTGTGGTGGTGGTGGTGGAGGAGGAGAAGGTGATGGTGGTGGAGG
AGGAGGAGAAGAAGGAGGAGGAGAAGAAGACAGGGGGAAAGAGAGAGTGA
AGGAGGAGGAGGAGGCGGAGGAGTACGACGAGGAGGAGAGAGGGGAGGGG
CGAGGCGCTCCTTACCTTGACCTTGTCTTTCACCGACATGAGCCTCAGGC
AGCCGTTACTTTATTGCTGGATGCCGTTGTGGTGGCCCAAAAGGAAGGGA
GGATCGACAGAGAGAGGGTGCGGCGTGTGCTGTGGAAGGAGGTAAATTGC
TTCCTTTGTCGGCACCCTCACCCGTCCGGTAGCCAAGGGTGGCAAATACA
ATCACTTCTCGCGGAGCAGGATATCTCTTGGGGCAGTAGTCAGGCCATCC
AAAGTATCACAGGCCTGGACGCTGACGAGATGATTCATATGTTTTATTTG
GGGCCTCAGCCACCGGGCTCTAGTCACAAGAAGGAGTATGGAGGAGGGGA
TGGAGAGGAAGAGCTGAAAGGAGGAGGTGATGATGGTTGTGGTGGTGGTG
GTGGAGGAGGAGAAGGTGATGGTGGTGGAGGAGGAGGAGAAGAAGGAGGA
GGAGAAGAAGACAGGGGGAAAGAGAGAGTGAAGGAGGAGGAGGAGGCGGA
GGAGTACGACGAGGAGGAGAGAGGGGAGGGGCGAGGCGCTCCTTACCTTG
ACCTTGTCTTTCACCGACATGAGCCTCAGGCAGCCGTTACTTTATTGCTG
GATGCCGTTGTGGTGGCCCAAAAGGAAGGGAGGATCGACAGAGAGAGGGT
GCGGCGTGTGCTGTGGAAGGAGGTAAATTGCTTCCTTTGTCGGCACCCTC
ACCCGTCCGGTAGCCAAGGGTGGCAAATACAATCACTTCTCGCGGAGCAG
GATATCTCTTGGGGCAGTAGTCAGGCCATCCAAAGTATCACAGGCCTGGA
CGCTGACGAGATGATTCATATGTTTTATTTGGGGCCTCAGCCACCGGGCT
CTAGTCACAAGAAGGAGTATGGAGGAGGGGATGGAGAGGAAGAGCTGAAA
GGAGGAGGTGATGATGGTTGTGGTGGTGGTGGTGGAGGAGGAGAAGGTGA
TGGTGGTGGAGGAGGAGGAGAAGAAGGAGGAGGAGAAGAAGACAGGGGGA
AAGAGAGAGTGAAGGAGGAGGAGGAGGCGGAGGAGTACGACGAGGAGGAG
AGAGGGGAGGGGCGAGGCGCTCCTTACCTTGACCTTGTCTTTCACCGACA
TGAGCCTCAGGCAGCCGTTACTTTATTGCTGGATGCCGTTGTGGTGGCCC
AAAAGGAAGGGAGGATCGACAGAGAGAGGGTGCGGCGTGTGCT back to top
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