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Properties
| Property Name | Value |
|---|
| TranscriptId | 632735 |
| Track | FilteredModels2 |
| ProteinId | 632649 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_22 | supercontig | scaffold_22:327484..330131 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7983 ID=mRNA_7983|Name=jgi.p|Nanoce1779_2|632649|organism=Nannochloropsis oceanica|type=mRNA|length=1891bp
GGCTTTGAAAGGAAGAAGCAAGACGCCCGATGACAGCGGGCGATGACCGT
CACGGAAAAGAGCAGACAGCGAAATGCTGGCGCAATACCACATGGCAAAT
ATGTGCAAATCTGGCCTTTATAAACACACGGAATACTCATTAACAAATTA
TTCTCTGTGCCCGAGGCAGGCGGCACAAACACGACAACCTCCCCCACTGC
GAAGCAACGTCTCAATCCACCTCCCGCTTCCGCCTCGAGCCTCCCTGACT
CTATATGGCCTATTCACCAGCGCACGAACCACCAGCAACGCCCGAGCCAC
GTTTTTTGGACGCGCACAGCACGAGCTATACGGCGTGCAGCACGGAGTTC
TGCCCCGTGGAAGGCTGGCGGGACTGGGTAGTGTGCGGGACATATCAGTT
GGTGAAGCATATTGGAGGAGCAGCAGGAAGAGAAAAAGGAGAGAAGGAGG
AAGAAGATGAAGGTGGTGGTGATGGAGAAGGAGAGGATACAAGAGAGGGA
AGCCTGCTTTTATACCGCTTGGTGGTAGAAGCAGCGGACGAGGCGGACGA
AAAGGAGATGAAGAAGCCCTGCCGTCGTCGCTTGGTCCATGTGCAGACAG
TAGAAGTGGGTGCTGGAGTCTTAGACTGCAAGTGGCGCCCTCCCTCGTCC
TCCTCCTCTCCTCCCTGCTCTTCGTCTTCCTCCTTTATGTCTTCGCCCAT
CCTGGCATGTGCCTTGTCCACGGGTGAGACCTCCATATATGCGCTGAGGA
GTTATCTCTCCAACCGTGGAGACGAGGAGGTAGACGGGGAGGTTCAAAAC
GAGACCGAGTATAACTGCGATTTTATAAACGACCTTTCTCCCAATCAGGA
TGCACCGATCGAGGTCTGGGTTGCTGTCTTCGCGGACGAGGAGGAGGAAG
GGAGGGAGGGAGAAAGAGAGGGAGGGGAGGTGATCTGGAGTGGGGGGGAC
GACTCCTGTTTGAAGGGATGGGACCTGAGGGCAGGGGTTAAGCGGCCTGT
GTGGTATGATAGCACCACGCACGGGGCGGGTGTAACGTGCATTGCCAGAC
AGGGAGGGAAGAATGGAGGGCTGTTCGCGACGGGGTGCTATGACGGCGTG
CTGCGGCTGTGGGATGTCAGGGCGATGGACCGACGGCCTCTATGTGTGCA
AGAATGCGGAGAGGTGGGCGGAGGGATCTGGAGGATTAAATGGCACCCGA
CGAAGAAAGGGACGATGGCTGTGGCGGGCATGCATGGAGGGGCATGTGTA
TTGGAGCTTGAAGAGGATGAGCGGAGAGAGGGAGGAGGAGGAGGAGGGGG
AGGGAAGTTGAGGAAGAGGTGGGGGCATGCTATCCTACAAACCTAGAAGT
ATCGCATGCAACCTGACGTCTTCTAGGAATTACATACGAGGGGAAGCCTT
CCAGCGATAGAAAGTTGATAGGCAACTCTTTCTCCTGTGGCTTCCTACAA
TCATAAAATTATCGCATGCAGCCTGTACCTGCAAACAAATGCTACCTACA
AGTGCACAGGTCCGTTGCACATAGTTATTTGCCGTTCCTACACTCTTATA
GAACTATCGCATGCAACCTGACGTCCTCTAGGATATGCTTGCATACGAGG
GAGAGCCTTCTAACATTTCACTACGTGACTTGGTATGCATATTCTTTCCT
TATTCCGAGTTGGTAAGCGACTTTTGACAGGTTTGAAATAGGTAGAGGAA
GGAAGGGAGGGAAGAAAGGGGAGTGGGGAGGTTGCGTGCCCTCCTGGGCG
TCACCTACGGTAGCAGTGACACTACCAAATGTTTTGAACATGCATAGAAT
GAAGCAATGAAGCATTTGTAATTTGAAATGATAACGTTTTACCTTTGTTG
AGAGGGCTTTGCTTGGCCTTGGAGTCGTTGGAGACCCGGTG back to topprotein sequence of jgi.p|Nanoce1779_2|632649 >mRNA_7983-protein ID=mRNA_7983-protein|Name=jgi.p|Nanoce1779_2|632649|organism=Nannochloropsis oceanica|type=polypeptide|length=364bp
MAYSPAHEPPATPEPRFLDAHSTSYTACSTEFCPVEGWRDWVVCGTYQLV
KHIGGAAGREKGEKEEEDEGGGDGEGEDTREGSLLLYRLVVEAADEADEK
EMKKPCRRRLVHVQTVEVGAGVLDCKWRPPSSSSSPPCSSSSSFMSSPIL
ACALSTGETSIYALRSYLSNRGDEEVDGEVQNETEYNCDFINDLSPNQDA
PIEVWVAVFADEEEEGREGEREGGEVIWSGGDDSCLKGWDLRAGVKRPVW
YDSTTHGAGVTCIARQGGKNGGLFATGCYDGVLRLWDVRAMDRRPLCVQE
CGEVGGGIWRIKWHPTKKGTMAVAGMHGGACVLELEEDERREGGGGGGGG
KLRKRWGHAILQT* back to topmRNA from alignment at scaffold_22:327484..330131- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7983 ID=mRNA_7983|Name=jgi.p|Nanoce1779_2|632649|organism=Nannochloropsis oceanica|type=mRNA|length=2648bp|location=Sequence derived from alignment at scaffold_22:327484..330131- (Nannochloropsis oceanica)
GGCTTTGAAAGGAAGAAGCAAGACGCCCGATGACAGCGGGCGATGACCGT
CACGGAAAAGAGCAGACAGCGAAATGCTGGCGCAATACCACATGGCAAAT
ATGTGCAAATCTGGCCTTTATAAACACACGGAATACTCATTAACAAATTA
TTCTCTGTGCCCGAGGCAGGCGGCACAAACACGACAACCTCCCCCACTGC
GAAGCAACGTCTCAATCCACCTCCCGCTTCCGCCTCGAGCCTCCCTGACT
CTATATGGCCTATTCACCAGCGCACGAACCACCAGCAACGCCCGAGCCAC
GTTTTTTGGACGCGCACAGCACGAGCTATACGGCGTGCAGCACGGAGTTC
TGCCCCGTGGAAGGCTGGCGGGACTGGGTAGTGTGCGGGACATATCAGTT
GGTGAAGCATATTGGAGGAGCAGCAGGAAGAGAAAAAGGAGAGAAGGAGG
AAGAAGATGAAGGTGGTGGTGATGGAGAAGGAGAGGATACAAGAGAGGGA
AGCCTGCTTTTATACCGCTTGGTGGTAGAAGCAGCGGACGAGGCGGACGA
AAAGGAGATGAAGAAGCCCTGCCGTCGTCGCTTGGTCCATGTGCAGACAG
TAGAAGTGGGTGCTGGAGTCTTAGACTGCAAGTGGCGCCCTCCCTCGTCC
TCCTCCTCTCCTCCCTGCTCTTCGTCTTCCTCCTTTATGTCTTCGCCCAT
CCTGGCATGTGCCTTGTCCACGGGTGAGACCTCCATATATGCGCTGAGGA
GTTATCTCTCCAACCGTGGAGACGAGGAGGTAGACGGGGAGGTTCAAAAC
GAGACCGAGTATAACTGCGATTTTATAAACGACCTTTCTCCCAATCAGGA
TGCAGTAAGAGTGTGTCGCTTAGTGCCACTCAGCCGCAGCAGCAGCAGCG
GCAGCAATGCCCCCCCCTCTACGCCGCTCTTCACCTCTTCCTTCTTCTCC
GCTGCCTCTCCCCCCCCCCTCCCCCCCTTCCTCCTCCTCCTCCTCCTCCT
CCTCTTCCGCCTCCTCTGTTTCCTCCACCGCACCGTCAAGCTTCATGAGC
CTCTCCCTCGATTGGTCCCACCCTCCCCTGGACTATCAACAAGACAATGT
CGAACAAGTCGAAGAAGACAGAAGCGGCGGCCCTCAGACACAACCTGCAA
TCCTAGAAAAAGATGAGCCACCGCCATCAACAGCACAAACGCATCGCCAG
TACCACCGACTGCAGAACCAGCACTGGCAACGCATCGTCTCGAGCCAATG
CAAAGGTAGCCTCGCCGTCCACTCCCTCCACCCCCACACGGGCGAGCTCA
CCCTCCTCTCCACGTGGTGCGCCCACTCCCTCTATTCCCAGCCGATCGAG
GTCTGGGTTGCTGTCTTCGCGGACGAGGAGGAGGAAGGGAGGGAGGGAGA
AAGAGAGGGAGGGGAGGTGATCTGGAGTGGGGGGGACGACTCCTGTTTGA
AGGGATGGGACCTGAGGGCAGGGGTTAAGCGGCCTGTGTGGTATGATAGC
ACCACGCACGGGGCGGGTGTAACGTGCATTGCCAGACAGGGAGGGAAGAA
TGGAGGGCTGTTCGCGACGGGGTGCTATGACGGCGTGCTGCGGCTGTGGG
ATGTCAGGTAGGTTTTGGATCCGGAAAAATCATTTAGCCCATTCATCCCT
ACTTTCCTCTTTTCCTCCTTTTTTCTTTGAGTTTTGGGCTCACTTCTTGA
TGCGTATTTCCCCTTCCTCCCTCCCTTTCTCTCTCGCAGGGCGATGGACC
GACGGCCTCTATGTGTGCAAGAATGCGGAGAGGTGGGCGGAGGGATCTGG
AGGATTAAATGGCACCCGACGAAGAAAGGGACGATGGCTGTGGCGGGCAT
GCATGGAGGGGCATGTGTATTGGAGCTTGAAGAGGATGAGCGGAGAGAGG
GAGGAGGAGGAGGAGGGGGAGGGAAGTTGAGGAAGAGGTGGGGGCATGGT
AAGCATGAGTCGATGGTGTATGGGATTGATTGGTGGAGGGGGGGAGAGGG
GTGGAGGGAGGATATTGTGGCGTCGTGTTCGTTTTATGACCGGGCGTTGC
ATTTGTGGGAATGTTGATAGTTCTTTTTTGTCGTAGCTATCCTACAAACC
TAGAAGTATCGCATGCAACCTGACGTCTTCTAGGAATTACATACGAGGGG
AAGCCTTCCAGCGATAGAAAGTTGATAGGCAACTCTTTCTCCTGTGGCTT
CCTACAATCATAAAATTATCGCATGCAGCCTGTACCTGCAAACAAATGCT
ACCTACAAGTGCACAGGTCCGTTGCACATAGTTATTTGCCGTTCCTACAC
TCTTATAGAACTATCGCATGCAACCTGACGTCCTCTAGGATATGCTTGCA
TACGAGGGAGAGCCTTCTAACATTTCACTACGTGACTTGGTATGCATATT
CTTTCCTTATTCCGAGTTGGTAAGCGACTTTTGACAGGTTTGAAATAGGT
AGAGGAAGGAAGGGAGGGAAGAAAGGGGAGTGGGGAGGTTGCGTGCCCTC
CTGGGCGTCACCTACGGTAGCAGTGACACTACCAAATGTTTTGAACATGC
ATAGAATGAAGCAATGAAGCATTTGTAATTTGAAATGATAACGTTTTACC
TTTGTTGAGAGGGCTTTGCTTGGCCTTGGAGTCGTTGGAGACCCGGTG back to topCoding sequence (CDS) from alignment at scaffold_22:327484..330131- >mRNA_7983 ID=mRNA_7983|Name=jgi.p|Nanoce1779_2|632649|organism=Nannochloropsis oceanica|type=CDS|length=4368bp|location=Sequence derived from alignment at scaffold_22:327484..330131- (Nannochloropsis oceanica)
CTATCCTACAAACCTAGGGCGATGGACCGACGGCCTCTATGTGTGCAAGA
ATGCGGAGAGGTGGGCGGAGGGATCTGGAGGATTAAATGGCACCCGACGA
AGAAAGGGACGATGGCTGTGGCGGGCATGCATGGAGGGGCATGTGTATTG
GAGCTTGAAGAGGATGAGCGGAGAGAGGGAGGAGGAGGAGGAGGGGGAGG
GAAGTTGAGGAAGAGGTGGGGGCATGCCGATCGAGGTCTGGGTTGCTGTC
TTCGCGGACGAGGAGGAGGAAGGGAGGGAGGGAGAAAGAGAGGGAGGGGA
GGTGATCTGGAGTGGGGGGGACGACTCCTGTTTGAAGGGATGGGACCTGA
GGGCAGGGGTTAAGCGGCCTGTGTGGTATGATAGCACCACGCACGGGGCG
GGTGTAACGTGCATTGCCAGACAGGGAGGGAAGAATGGAGGGCTGTTCGC
GACGGGGTGCTATGACGGCGTGCTGCGGCTGTGGGATGTCAGATGGCCTA
TTCACCAGCGCACGAACCACCAGCAACGCCCGAGCCACGTTTTTTGGACG
CGCACAGCACGAGCTATACGGCGTGCAGCACGGAGTTCTGCCCCGTGGAA
GGCTGGCGGGACTGGGTAGTGTGCGGGACATATCAGTTGGTGAAGCATAT
TGGAGGAGCAGCAGGAAGAGAAAAAGGAGAGAAGGAGGAAGAAGATGAAG
GTGGTGGTGATGGAGAAGGAGAGGATACAAGAGAGGGAAGCCTGCTTTTA
TACCGCTTGGTGGTAGAAGCAGCGGACGAGGCGGACGAAAAGGAGATGAA
GAAGCCCTGCCGTCGTCGCTTGGTCCATGTGCAGACAGTAGAAGTGGGTG
CTGGAGTCTTAGACTGCAAGTGGCGCCCTCCCTCGTCCTCCTCCTCTCCT
CCCTGCTCTTCGTCTTCCTCCTTTATGTCTTCGCCCATCCTGGCATGTGC
CTTGTCCACGGGTGAGACCTCCATATATGCGCTGAGGAGTTATCTCTCCA
ACCGTGGAGACGAGGAGGTAGACGGGGAGGTTCAAAACGAGACCGAGTAT
AACTGCGATTTTATAAACGACCTTTCTCCCAATCAGGATGCACTATCCTA
CAAACCTAGGGCGATGGACCGACGGCCTCTATGTGTGCAAGAATGCGGAG
AGGTGGGCGGAGGGATCTGGAGGATTAAATGGCACCCGACGAAGAAAGGG
ACGATGGCTGTGGCGGGCATGCATGGAGGGGCATGTGTATTGGAGCTTGA
AGAGGATGAGCGGAGAGAGGGAGGAGGAGGAGGAGGGGGAGGGAAGTTGA
GGAAGAGGTGGGGGCATGCCGATCGAGGTCTGGGTTGCTGTCTTCGCGGA
CGAGGAGGAGGAAGGGAGGGAGGGAGAAAGAGAGGGAGGGGAGGTGATCT
GGAGTGGGGGGGACGACTCCTGTTTGAAGGGATGGGACCTGAGGGCAGGG
GTTAAGCGGCCTGTGTGGTATGATAGCACCACGCACGGGGCGGGTGTAAC
GTGCATTGCCAGACAGGGAGGGAAGAATGGAGGGCTGTTCGCGACGGGGT
GCTATGACGGCGTGCTGCGGCTGTGGGATGTCAGATGGCCTATTCACCAG
CGCACGAACCACCAGCAACGCCCGAGCCACGTTTTTTGGACGCGCACAGC
ACGAGCTATACGGCGTGCAGCACGGAGTTCTGCCCCGTGGAAGGCTGGCG
GGACTGGGTAGTGTGCGGGACATATCAGTTGGTGAAGCATATTGGAGGAG
CAGCAGGAAGAGAAAAAGGAGAGAAGGAGGAAGAAGATGAAGGTGGTGGT
GATGGAGAAGGAGAGGATACAAGAGAGGGAAGCCTGCTTTTATACCGCTT
GGTGGTAGAAGCAGCGGACGAGGCGGACGAAAAGGAGATGAAGAAGCCCT
GCCGTCGTCGCTTGGTCCATGTGCAGACAGTAGAAGTGGGTGCTGGAGTC
TTAGACTGCAAGTGGCGCCCTCCCTCGTCCTCCTCCTCTCCTCCCTGCTC
TTCGTCTTCCTCCTTTATGTCTTCGCCCATCCTGGCATGTGCCTTGTCCA
CGGGTGAGACCTCCATATATGCGCTGAGGAGTTATCTCTCCAACCGTGGA
GACGAGGAGGTAGACGGGGAGGTTCAAAACGAGACCGAGTATAACTGCGA
TTTTATAAACGACCTTTCTCCCAATCAGGATGCACTATCCTACAAACCTA
GGGCGATGGACCGACGGCCTCTATGTGTGCAAGAATGCGGAGAGGTGGGC
GGAGGGATCTGGAGGATTAAATGGCACCCGACGAAGAAAGGGACGATGGC
TGTGGCGGGCATGCATGGAGGGGCATGTGTATTGGAGCTTGAAGAGGATG
AGCGGAGAGAGGGAGGAGGAGGAGGAGGGGGAGGGAAGTTGAGGAAGAGG
TGGGGGCATGCCGATCGAGGTCTGGGTTGCTGTCTTCGCGGACGAGGAGG
AGGAAGGGAGGGAGGGAGAAAGAGAGGGAGGGGAGGTGATCTGGAGTGGG
GGGGACGACTCCTGTTTGAAGGGATGGGACCTGAGGGCAGGGGTTAAGCG
GCCTGTGTGGTATGATAGCACCACGCACGGGGCGGGTGTAACGTGCATTG
CCAGACAGGGAGGGAAGAATGGAGGGCTGTTCGCGACGGGGTGCTATGAC
GGCGTGCTGCGGCTGTGGGATGTCAGATGGCCTATTCACCAGCGCACGAA
CCACCAGCAACGCCCGAGCCACGTTTTTTGGACGCGCACAGCACGAGCTA
TACGGCGTGCAGCACGGAGTTCTGCCCCGTGGAAGGCTGGCGGGACTGGG
TAGTGTGCGGGACATATCAGTTGGTGAAGCATATTGGAGGAGCAGCAGGA
AGAGAAAAAGGAGAGAAGGAGGAAGAAGATGAAGGTGGTGGTGATGGAGA
AGGAGAGGATACAAGAGAGGGAAGCCTGCTTTTATACCGCTTGGTGGTAG
AAGCAGCGGACGAGGCGGACGAAAAGGAGATGAAGAAGCCCTGCCGTCGT
CGCTTGGTCCATGTGCAGACAGTAGAAGTGGGTGCTGGAGTCTTAGACTG
CAAGTGGCGCCCTCCCTCGTCCTCCTCCTCTCCTCCCTGCTCTTCGTCTT
CCTCCTTTATGTCTTCGCCCATCCTGGCATGTGCCTTGTCCACGGGTGAG
ACCTCCATATATGCGCTGAGGAGTTATCTCTCCAACCGTGGAGACGAGGA
GGTAGACGGGGAGGTTCAAAACGAGACCGAGTATAACTGCGATTTTATAA
ACGACCTTTCTCCCAATCAGGATGCACTATCCTACAAACCTAGGGCGATG
GACCGACGGCCTCTATGTGTGCAAGAATGCGGAGAGGTGGGCGGAGGGAT
CTGGAGGATTAAATGGCACCCGACGAAGAAAGGGACGATGGCTGTGGCGG
GCATGCATGGAGGGGCATGTGTATTGGAGCTTGAAGAGGATGAGCGGAGA
GAGGGAGGAGGAGGAGGAGGGGGAGGGAAGTTGAGGAAGAGGTGGGGGCA
TGCCGATCGAGGTCTGGGTTGCTGTCTTCGCGGACGAGGAGGAGGAAGGG
AGGGAGGGAGAAAGAGAGGGAGGGGAGGTGATCTGGAGTGGGGGGGACGA
CTCCTGTTTGAAGGGATGGGACCTGAGGGCAGGGGTTAAGCGGCCTGTGT
GGTATGATAGCACCACGCACGGGGCGGGTGTAACGTGCATTGCCAGACAG
GGAGGGAAGAATGGAGGGCTGTTCGCGACGGGGTGCTATGACGGCGTGCT
GCGGCTGTGGGATGTCAGATGGCCTATTCACCAGCGCACGAACCACCAGC
AACGCCCGAGCCACGTTTTTTGGACGCGCACAGCACGAGCTATACGGCGT
GCAGCACGGAGTTCTGCCCCGTGGAAGGCTGGCGGGACTGGGTAGTGTGC
GGGACATATCAGTTGGTGAAGCATATTGGAGGAGCAGCAGGAAGAGAAAA
AGGAGAGAAGGAGGAAGAAGATGAAGGTGGTGGTGATGGAGAAGGAGAGG
ATACAAGAGAGGGAAGCCTGCTTTTATACCGCTTGGTGGTAGAAGCAGCG
GACGAGGCGGACGAAAAGGAGATGAAGAAGCCCTGCCGTCGTCGCTTGGT
CCATGTGCAGACAGTAGAAGTGGGTGCTGGAGTCTTAGACTGCAAGTGGC
GCCCTCCCTCGTCCTCCTCCTCTCCTCCCTGCTCTTCGTCTTCCTCCTTT
ATGTCTTCGCCCATCCTGGCATGTGCCTTGTCCACGGGTGAGACCTCCAT
ATATGCGCTGAGGAGTTATCTCTCCAACCGTGGAGACGAGGAGGTAGACG
GGGAGGTTCAAAACGAGACCGAGTATAACTGCGATTTTATAAACGACCTT
TCTCCCAATCAGGATGCA back to top
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