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Properties
| Property Name | Value |
|---|
| TranscriptId | 600796 |
| Track | FilteredModels2 |
| ProteinId | 600710 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_22 | supercontig | scaffold_22:284398..286439 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7964 ID=mRNA_7964|Name=jgi.p|Nanoce1779_2|600710|organism=Nannochloropsis oceanica|type=mRNA|length=1893bp
GGGTCACGTCGGAGCTCCTCCAGGCAAAACACATATGTTCTATGAAGCAA
CATAACCAAGGCCTTGCTTGACTTTCTTCATCAGGGAAAATTAGTTCAAC
CTTTGCAATTTTTCCAACCCTCCGTTGACGTAGGGGGTTTTGCCACCCCT
GGCCATGACAGTTATGTACACAATCGATAAATCACATAGAGTTCAAGAGT
CACGGTCGCGAAAAGAAAAAAAGATGGTCGATGCGCAGCTGAACGATGTG
ATGTGATGTGATGTGTGGGCATGGTATGAATAGGGCGGGTCCTGTCCTTT
TCTTGCTGGCGGCCCTCCAATAACCGAAACCTTTCTTGAAGCTGCTTGCA
ACGCAGTTCGCATCCTACCACTTCGCATAAAACATAGACCTACACACTCT
CCACACAGGCACGGCACAACCATGACACTACTGCCGATCTTGGGCCTTGT
GTTGTTGGCTTTATGCCTCGACTCGACCGTCGGCTTTTTGCAGCCTCATC
AACCACCCCACAGCAACAACAGGGGTGCGCAGAGAAAATGTGGCTCCATC
TTAGGCATGCTGTCTGTGGACGAAGCCATGAACATGAAAGAAGCTTGCGG
TCAAGCGCAAGGTGTCTTGCTTGACCTCACTGCCGGCGAGTGGGGCTTAC
TTTCCGTGACGGGGGAGGACCGCTTACGCTTTTTGCACAACCAGCTCACC
AACAGCTTCACGGATCTCAAACCTGGGCAAGTGTTGGAGTCTTCTTACAC
TTCTTCAACCGGTCGGACCATAGATCTTGTGACGGCCTATGTGCTGCAGG
ACGAGGTGCTGCTTCTGTCCTCTCCGTCCCGGCATGAGCAACTCTTGGGA
GCGTTCAACAAGTACATCTTCCCTTTGGACAGGGTGGAGGTTCAAAGGAG
GGACCTCTCAGGGCTCTTCATTTGGCTGGGCCCTGCTTCTGCGGCCCAAA
CCGTGCTCCCCCAGCTCCTCGGTAACGACGACACCCTCGCTCCTCTCCCT
GGTCCCAGCCAATGCCAGTACTGCTCTTCCTCTTCGTTTAGCATGGTACT
GGCAGAGGGGACGGGTGTGGCTTTGTCGGGATACACCATCCTCGCCCTGC
GCGCTCGGGCCGCTAGCATACCAGCAGGCGATGTTGCTGCTCATGTCGGC
AGGGGTGGTATGGAGGAGTGGCAAGCCCTGCGTGTCTTACAAGGTAGGCC
GTATCCAGACAAGGAACTCACGATGGACGTGACCCCTTTAGAGGCGGGGT
TGTGGCACACTGTGGACTTAAATAAAGGGTGCTACCTGGGTCAGGAAACG
CTAGCGAGGCAGGCGAACAACAAAGGGGAACGCCAGAAACTCTATGCCGT
CCGAGGGAAGGGGCTAAAGGAACGAAAACGCGTCATAGATGCGGAGGGAA
ACAGGGCGGGGGTCATTACTTCCTGCATGAATGACATGGGGCTTGCGTAT
ATTCGCAAGACAGTGCTGAACCCAACCACAGACATGCTATTCGTCGACGG
CGAAGCACAGAGAATTCAGGTTTTAGACATACCCTATGCTACGCGGGCCG
CCACCTTTAATAAAATGACGACCCCAAAAGAGGCAGCAGCAGCTGCTGCA
GCTGTTAATACTACCGCGGCGGACGTGGCGGCGGAGGCGGAGCGGAAGGC
TAAGAAGCTCGAAGAGATGAAGCGAAGATTGGAGGCGTTCCAAGCAAAAA
GTCGACAGACATAAAATGTACCATGTGTGTTGTGTGTGCGTGCGGGGCCA
GCAACAATGAGGCAGATTAAATTGATGAAAATTCAGAAATGAAACAGTAA
GAGCAATGATGACGCTTACAGAAATGATTAAAGCGCTTTTTGTTTTCCAT
GTGGTAGCTGTTCATGCGCTGGGTTATGATATCCTCGAAGTTA back to topprotein sequence of jgi.p|Nanoce1779_2|600710 >mRNA_7964-protein ID=mRNA_7964-protein|Name=jgi.p|Nanoce1779_2|600710|organism=Nannochloropsis oceanica|type=polypeptide|length=431bp
MTLLPILGLVLLALCLDSTVGFLQPHQPPHSNNRGAQRKCGSILGMLSVD
EAMNMKEACGQAQGVLLDLTAGEWGLLSVTGEDRLRFLHNQLTNSFTDLK
PGQVLESSYTSSTGRTIDLVTAYVLQDEVLLLSSPSRHEQLLGAFNKYIF
PLDRVEVQRRDLSGLFIWLGPASAAQTVLPQLLGNDDTLAPLPGPSQCQY
CSSSSFSMVLAEGTGVALSGYTILALRARAASIPAGDVAAHVGRGGMEEW
QALRVLQGRPYPDKELTMDVTPLEAGLWHTVDLNKGCYLGQETLARQANN
KGERQKLYAVRGKGLKERKRVIDAEGNRAGVITSCMNDMGLAYIRKTVLN
PTTDMLFVDGEAQRIQVLDIPYATRAATFNKMTTPKEAAAAAAAVNTTAA
DVAAEAERKAKKLEEMKRRLEAFQAKSRQT* back to topmRNA from alignment at scaffold_22:284398..286439- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7964 ID=mRNA_7964|Name=jgi.p|Nanoce1779_2|600710|organism=Nannochloropsis oceanica|type=mRNA|length=2042bp|location=Sequence derived from alignment at scaffold_22:284398..286439- (Nannochloropsis oceanica)
GGGTCACGTCGGAGCTCCTCCAGGCAAAACACATATGTTCTATGAAGCAA
CATAACCAAGGCCTTGCTTGACTTTCTTCATCAGGGAAAATTAGTTCAAC
CTTTGCAATTTTTCCAACCCTCCGTTGACGTAGGGGGTTTTGCCACCCCT
GGCCATGACAGTTATGTACACAATCGATAAATCACATAGAGTTCAAGAGT
CACGGTCGCGAAAAGAAAAAAAGATGGTCGATGCGCAGCTGAACGATGTG
ATGTGATGTGATGTGTGGGCATGGTATGAATAGGGCGGGTCCTGTCCTTT
TCTTGCTGGCGGCCCTCCAATAACCGAAACCTTTCTTGAAGCTGCTTGCA
ACGCAGTTCGCATCCTACCACTTCGCATAAAACATAGACCTACACACTCT
CCACACAGGCACGGCACAACCATGACACTACTGCCGATCTTGGGCCTTGT
GTTGTTGGCTTTATGCCTCGACTCGACCGTCGGCTTTTTGCAGCCTCATC
AACCACCCCACAGCAACAACAGGTGAGACTTCCATTCTTGCACTTGGAGA
AGGAAGCTAGGACCAAGACGCTCATCCCACTATTACACGACCACAGGGGT
GCGCAGAGAAAATGTGGCTCCATCTTAGGCATGCTGTCTGTGGACGAAGC
CATGAACATGAAAGAAGCTTGCGGTCAAGCGCAAGGTGTCTTGCTTGACC
TCACTGCCGGCGAGTGGGGCTTACTTTCCGTGACGGGGGAGGACCGCTTA
CGCTTTTTGCACAACCAGCTCACCAACAGCTTCACGGATCTCAAACCTGG
GCAAGTGTTGGAGTCTTCTTACACTTCTTCAACCGGTCGGACCATAGATC
TTGTGACGGCCTATGTGCTGCAGGACGAGGTGCTGCTTCTGTCCTCTCCG
TCCCGGCATGAGCAACTCTTGGGAGCGTTCAACAAGTACATCTTCCCTTT
GGACAGGTGAAAAACGCAAATACTGCAGACACGAAGGTCTCCTGGCTATG
CATTCTTACATAATATCCAAAATACACCCAGGGTGGAGGTTCAAAGGAGG
GACCTCTCAGGGCTCTTCATTTGGCTGGGCCCTGCTTCTGCGGCCCAAAC
CGTGCTCCCCCAGCTCCTCGGTAACGACGACACCCTCGCTCCTCTCCCTG
GTCCCAGCCAATGCCAGTACTGCTCTTCCTCTTCGTTTAGCATGGTACTG
GCAGAGGGGACGGGTGTGGCTTTGTCGGGATACACCATCCTCGCCCTGCG
CGCTCGGGCCGCTAGCATACCAGCAGGCGATGTTGCTGCTCATGTCGGCA
GGGGTGGTATGGAGGAGTGGCAAGCCCTGCGTGTCTTACAAGGTAGGCCG
TATCCAGACAAGGAACTCACGATGGACGTGACCCCTTTAGAGGCGGGGTT
GTGGCACACTGTGGACTTAAATAAAGGGTGCTACCTGGGTCAGGAAACGC
TAGCGAGGCAGGCGAACAACAAAGGGGAACGCCAGAAACTCTATGCCGTC
CGAGGGAAGGGGCTAAAGGAACGAAAACGCGTCATAGATGCGGAGGGAAA
CAGGGCGGGGGTCATTACTTCCTGCATGAATGACATGGGGCTTGCGTATA
TTCGCAAGACAGTGCTGAACCCAACCACAGACATGCTATTCGTCGACGGC
GAAGCACAGAGAATTCAGGTTTTAGACATACCCTATGCTACGCGGGCCGC
CACCTTTAATAAAATGACGACCCCAAAAGAGGCAGCAGCAGCTGCTGCAG
CTGTTAATACTACCGCGGCGGACGTGGCGGCGGAGGCGGAGCGGAAGGCT
AAGAAGCTCGAAGAGATGAAGCGAAGATTGGAGGCGTTCCAAGCAAAAAG
TCGACAGACATAAAATGTACCATGTGTGTTGTGTGTGCGTGCGGGGCCAG
CAACAATGAGGCAGATTAAATTGATGAAAATTCAGAAATGAAACAGTAAG
AGCAATGATGACGCTTACAGAAATGATTAAAGCGCTTTTTGTTTTCCATG
TGGTAGCTGTTCATGCGCTGGGTTATGATATCCTCGAAGTTA back to topCoding sequence (CDS) from alignment at scaffold_22:284398..286439- >mRNA_7964 ID=mRNA_7964|Name=jgi.p|Nanoce1779_2|600710|organism=Nannochloropsis oceanica|type=CDS|length=3879bp|location=Sequence derived from alignment at scaffold_22:284398..286439- (Nannochloropsis oceanica)
GGTGGAGGTTCAAAGGAGGGACCTCTCAGGGCTCTTCATTTGGCTGGGCC
CTGCTTCTGCGGCCCAAACCGTGCTCCCCCAGCTCCTCGGTAACGACGAC
ACCCTCGCTCCTCTCCCTGGTCCCAGCCAATGCCAGTACTGCTCTTCCTC
TTCGTTTAGCATGGTACTGGCAGAGGGGACGGGTGTGGCTTTGTCGGGAT
ACACCATCCTCGCCCTGCGCGCTCGGGCCGCTAGCATACCAGCAGGCGAT
GTTGCTGCTCATGTCGGCAGGGGTGGTATGGAGGAGTGGCAAGCCCTGCG
TGTCTTACAAGGTAGGCCGTATCCAGACAAGGAACTCACGATGGACGTGA
CCCCTTTAGAGGCGGGGTTGTGGCACACTGTGGACTTAAATAAAGGGTGC
TACCTGGGTCAGGAAACGCTAGCGAGGCAGGCGAACAACAAAGGGGAACG
CCAGAAACTCTATGCCGTCCGAGGGAAGGGGCTAAAGGAACGAAAACGCG
TCATAGATGCGGAGGGAAACAGGGCGGGGGTCATTACTTCCTGCATGAAT
GACATGGGGCTTGCGTATATTCGCAAGACAGTGCTGAACCCAACCACAGA
CATGCTATTCGTCGACGGCGAAGCACAGAGAATTCAGGTTTTAGACATAC
CCTATGCTACGCGGGCCGCCACCTTTAATAAAATGACGACCCCAAAAGAG
GCAGCAGCAGCTGCTGCAGCTGTTAATACTACCGCGGCGGACGTGGCGGC
GGAGGCGGAGCGGAAGGCTAAGAAGCTCGAAGAGATGAAGCGAAGATTGG
AGGCGTTCCAAGCAAAAAGTCGACAGACATAAGGGTGCGCAGAGAAAATG
TGGCTCCATCTTAGGCATGCTGTCTGTGGACGAAGCCATGAACATGAAAG
AAGCTTGCGGTCAAGCGCAAGGTGTCTTGCTTGACCTCACTGCCGGCGAG
TGGGGCTTACTTTCCGTGACGGGGGAGGACCGCTTACGCTTTTTGCACAA
CCAGCTCACCAACAGCTTCACGGATCTCAAACCTGGGCAAGTGTTGGAGT
CTTCTTACACTTCTTCAACCGGTCGGACCATAGATCTTGTGACGGCCTAT
GTGCTGCAGGACGAGGTGCTGCTTCTGTCCTCTCCGTCCCGGCATGAGCA
ACTCTTGGGAGCGTTCAACAAGTACATCTTCCCTTTGGACAGATGACACT
ACTGCCGATCTTGGGCCTTGTGTTGTTGGCTTTATGCCTCGACTCGACCG
TCGGCTTTTTGCAGCCTCATCAACCACCCCACAGCAACAACAGGGTGGAG
GTTCAAAGGAGGGACCTCTCAGGGCTCTTCATTTGGCTGGGCCCTGCTTC
TGCGGCCCAAACCGTGCTCCCCCAGCTCCTCGGTAACGACGACACCCTCG
CTCCTCTCCCTGGTCCCAGCCAATGCCAGTACTGCTCTTCCTCTTCGTTT
AGCATGGTACTGGCAGAGGGGACGGGTGTGGCTTTGTCGGGATACACCAT
CCTCGCCCTGCGCGCTCGGGCCGCTAGCATACCAGCAGGCGATGTTGCTG
CTCATGTCGGCAGGGGTGGTATGGAGGAGTGGCAAGCCCTGCGTGTCTTA
CAAGGTAGGCCGTATCCAGACAAGGAACTCACGATGGACGTGACCCCTTT
AGAGGCGGGGTTGTGGCACACTGTGGACTTAAATAAAGGGTGCTACCTGG
GTCAGGAAACGCTAGCGAGGCAGGCGAACAACAAAGGGGAACGCCAGAAA
CTCTATGCCGTCCGAGGGAAGGGGCTAAAGGAACGAAAACGCGTCATAGA
TGCGGAGGGAAACAGGGCGGGGGTCATTACTTCCTGCATGAATGACATGG
GGCTTGCGTATATTCGCAAGACAGTGCTGAACCCAACCACAGACATGCTA
TTCGTCGACGGCGAAGCACAGAGAATTCAGGTTTTAGACATACCCTATGC
TACGCGGGCCGCCACCTTTAATAAAATGACGACCCCAAAAGAGGCAGCAG
CAGCTGCTGCAGCTGTTAATACTACCGCGGCGGACGTGGCGGCGGAGGCG
GAGCGGAAGGCTAAGAAGCTCGAAGAGATGAAGCGAAGATTGGAGGCGTT
CCAAGCAAAAAGTCGACAGACATAAGGGTGCGCAGAGAAAATGTGGCTCC
ATCTTAGGCATGCTGTCTGTGGACGAAGCCATGAACATGAAAGAAGCTTG
CGGTCAAGCGCAAGGTGTCTTGCTTGACCTCACTGCCGGCGAGTGGGGCT
TACTTTCCGTGACGGGGGAGGACCGCTTACGCTTTTTGCACAACCAGCTC
ACCAACAGCTTCACGGATCTCAAACCTGGGCAAGTGTTGGAGTCTTCTTA
CACTTCTTCAACCGGTCGGACCATAGATCTTGTGACGGCCTATGTGCTGC
AGGACGAGGTGCTGCTTCTGTCCTCTCCGTCCCGGCATGAGCAACTCTTG
GGAGCGTTCAACAAGTACATCTTCCCTTTGGACAGATGACACTACTGCCG
ATCTTGGGCCTTGTGTTGTTGGCTTTATGCCTCGACTCGACCGTCGGCTT
TTTGCAGCCTCATCAACCACCCCACAGCAACAACAGGGTGGAGGTTCAAA
GGAGGGACCTCTCAGGGCTCTTCATTTGGCTGGGCCCTGCTTCTGCGGCC
CAAACCGTGCTCCCCCAGCTCCTCGGTAACGACGACACCCTCGCTCCTCT
CCCTGGTCCCAGCCAATGCCAGTACTGCTCTTCCTCTTCGTTTAGCATGG
TACTGGCAGAGGGGACGGGTGTGGCTTTGTCGGGATACACCATCCTCGCC
CTGCGCGCTCGGGCCGCTAGCATACCAGCAGGCGATGTTGCTGCTCATGT
CGGCAGGGGTGGTATGGAGGAGTGGCAAGCCCTGCGTGTCTTACAAGGTA
GGCCGTATCCAGACAAGGAACTCACGATGGACGTGACCCCTTTAGAGGCG
GGGTTGTGGCACACTGTGGACTTAAATAAAGGGTGCTACCTGGGTCAGGA
AACGCTAGCGAGGCAGGCGAACAACAAAGGGGAACGCCAGAAACTCTATG
CCGTCCGAGGGAAGGGGCTAAAGGAACGAAAACGCGTCATAGATGCGGAG
GGAAACAGGGCGGGGGTCATTACTTCCTGCATGAATGACATGGGGCTTGC
GTATATTCGCAAGACAGTGCTGAACCCAACCACAGACATGCTATTCGTCG
ACGGCGAAGCACAGAGAATTCAGGTTTTAGACATACCCTATGCTACGCGG
GCCGCCACCTTTAATAAAATGACGACCCCAAAAGAGGCAGCAGCAGCTGC
TGCAGCTGTTAATACTACCGCGGCGGACGTGGCGGCGGAGGCGGAGCGGA
AGGCTAAGAAGCTCGAAGAGATGAAGCGAAGATTGGAGGCGTTCCAAGCA
AAAAGTCGACAGACATAAGGGTGCGCAGAGAAAATGTGGCTCCATCTTAG
GCATGCTGTCTGTGGACGAAGCCATGAACATGAAAGAAGCTTGCGGTCAA
GCGCAAGGTGTCTTGCTTGACCTCACTGCCGGCGAGTGGGGCTTACTTTC
CGTGACGGGGGAGGACCGCTTACGCTTTTTGCACAACCAGCTCACCAACA
GCTTCACGGATCTCAAACCTGGGCAAGTGTTGGAGTCTTCTTACACTTCT
TCAACCGGTCGGACCATAGATCTTGTGACGGCCTATGTGCTGCAGGACGA
GGTGCTGCTTCTGTCCTCTCCGTCCCGGCATGAGCAACTCTTGGGAGCGT
TCAACAAGTACATCTTCCCTTTGGACAGATGACACTACTGCCGATCTTGG
GCCTTGTGTTGTTGGCTTTATGCCTCGACTCGACCGTCGGCTTTTTGCAG
CCTCATCAACCACCCCACAGCAACAACAG back to top
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