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Properties
| Property Name | Value |
|---|
| TranscriptId | 636180 |
| Track | FilteredModels2 |
| ProteinId | 636094 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:449202..451118 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_793 ID=mRNA_793|Name=jgi.p|Nanoce1779_2|636094|organism=Nannochloropsis oceanica|type=mRNA|length=1554bp
ATGGCTGCTGATAATAATGCCCTGTCCCGCAAACTATTGACAAGCGACAT
ACCTTTCCAGCTCTACAACACGGCCTCCAGAAAAAAGGAGCCATTCAAGA
CCGAGGAACCCAGCAAAGTCTCCTTCTACAGCTGTGGCCCTACCATCTAC
GACTACGCGCACATCGGAAATTTTCGTGCCTTTCTCACCTATGACGTGCT
TAAGCGGTGGCTGCTTTACTCGGGTTATAGCGTCGAACATATATGTAATT
TAACGGATGTGGACGATAAAATAATCAAGAGGATGGCGAGGGACAAAATA
TCCTTGCCGGAGCTGACGGAAAAATACGCCCAAGTATTCTTTGAAGATTT
GAAGGCATTGAATATCGTGCCTGCAAGTCGCTACCCGCGGGCGACGGAGC
ATATTGATGACATAGTTCATATGGTGCAGGAATTGATGGAACGGGGTTTC
GCTTACGAAAGCCAAGGTTCCGTCTATTTCCGTGTTAACAAATTCCCCGC
TTACGGGAAATTGGCTCGGCTGGATTTCTCAGGCATGGAAAGAGGGGCAG
GGGAGGGGGGAGGAATCAACGATGCAGACGAGTATGTTGCAGAGAAGGGG
GACGCAAAGGATTTTGCGCTGTGGAAGGCGTACAAAGAGGAAGACGGGCC
TGTGTTTTGGGAGACGGCACTGGGAAAGGGTCGGCCGGGGTGGCACATCG
AGTGTAGTGCTATGGCGAGGACATATCTGGGGTTAACTGTAGATGTGCAC
GCGGGAGGGGTTGATTTGGTTTTCCCTCATCATGAAAATGAGGTGGCACA
GAGCGAAGCGGCGAATGGAGGGAAACGGTTTTGTAACTGTTGGGTCCACA
ACGGGTTTGTGAATGTGGAAAATGAGAAGATGTCGAAGAGTAAGGGGAAT
TTCCTCACGTTGAAGGGGAGCTTGAAGGGAGGGTTGGAGTTAAGAGCGTT
TCGGTATTTGGTCGTTACGAGCCAATACCGGAGTCCGTTGAATTTTAACA
AGGAGGGCCTGGAGGGGGCAAAGAAGACGGTGATGAGGCTGGATAAATTG
AGAAAACGTTTGCTGGATGTGGTGGAGAAAGGGAAGGAGGACGAGGGAGG
GTTTGGGATGAAGGATGTGATTGAGAAAGCTTTGAAGGGGTTTGAGGCGG
GGATGGCGGATGATTTGAATACACCAAGGGCCGCGGCTGCCTTGTTTACT
TTGGTGAAAGGCGCGGAGAAAGCGTTAAAATCGACCCCTCCCTTCCTCCC
TCCCTCGGAGGCCCGCGAGGTTTTGGTGGCTTTGGAAAGGATGGATGAAG
TGTTGGGGATTTTTTATGACCCTCCCTCAGTGGAGGGGGGGGTAGAGGGA
GGGGAGGAGGGAGGGGGACCGGTGATTGTGGCTTTGAATGACTTGCCTGT
GGAAGCGCAGGAGTTAGTAAGGAGGAGGGGAAAGGCGAAGGAGAATAAAA
TCTGGGGGGAGGCAGATGGATGTAGGGATGCGTTGAAGAGTAAATTTGGG
GTGATTTTAAAGGATGTGAAGGGGGGAGAGGTGCAGATCATGAAGGAGGG
GTAG back to topprotein sequence of jgi.p|Nanoce1779_2|636094 >mRNA_793-protein ID=mRNA_793-protein|Name=jgi.p|Nanoce1779_2|636094|organism=Nannochloropsis oceanica|type=polypeptide|length=518bp
MAADNNALSRKLLTSDIPFQLYNTASRKKEPFKTEEPSKVSFYSCGPTIY
DYAHIGNFRAFLTYDVLKRWLLYSGYSVEHICNLTDVDDKIIKRMARDKI
SLPELTEKYAQVFFEDLKALNIVPASRYPRATEHIDDIVHMVQELMERGF
AYESQGSVYFRVNKFPAYGKLARLDFSGMERGAGEGGGINDADEYVAEKG
DAKDFALWKAYKEEDGPVFWETALGKGRPGWHIECSAMARTYLGLTVDVH
AGGVDLVFPHHENEVAQSEAANGGKRFCNCWVHNGFVNVENEKMSKSKGN
FLTLKGSLKGGLELRAFRYLVVTSQYRSPLNFNKEGLEGAKKTVMRLDKL
RKRLLDVVEKGKEDEGGFGMKDVIEKALKGFEAGMADDLNTPRAAAALFT
LVKGAEKALKSTPPFLPPSEAREVLVALERMDEVLGIFYDPPSVEGGVEG
GEEGGGPVIVALNDLPVEAQELVRRRGKAKENKIWGEADGCRDALKSKFG
VILKDVKGGEVQIMKEG* back to topmRNA from alignment at scaffold_2:449202..451118- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_793 ID=mRNA_793|Name=jgi.p|Nanoce1779_2|636094|organism=Nannochloropsis oceanica|type=mRNA|length=1917bp|location=Sequence derived from alignment at scaffold_2:449202..451118- (Nannochloropsis oceanica)
ATGGCTGCTGATAATAATGCCCTGTCCCGCAAACTATTGACAAGCGACAT
ACCTTTCCAGCTCTACAACACGGCCTCCAGAAAAAAGGAGCCATTCAAGA
CCGGTACGTGCCTTCCCTTCCTGTCATTTCTTCCAGCATGTGTAGCTGTT
CCCTTCATTTCTGCTTTCACACTTAGTGAAGCGAATCTTTGCATACTCAA
TTTCTTCCGTTCTCACTAACCCATCATATTCACCTGCCCTCCCTCCCTCC
CTCCCTCCCCCTCCCCTTCCCTCTCCCCAGAGGAACCCAGCAAAGTCTCC
TTCTACAGCTGTGGCCCTACCATCTACGACTACGCGCACATCGGAAATTT
TCGTGCCTTTCTCACCTATGACGTGCTTAAGCGGTGGCTGCTTTACTCGG
GTTATAGCGTCGAACATATATGTAATTTAACGGATGTGGACGATAAAATA
ATCAAGAGGATGGCGAGGGACAAAATATCCTTGCCGGAGCTGACGGAAAA
ATACGCCCAAGTATTCTTTGAAGATTTGAAGGCATTGAATATCGTGCCTG
CAAGTCGCTACCCGCGGGCGACGGAGCATATTGATGACATAGTTCATATG
GTGCAGGAATTGATGGAACGGTAGGTGCTTCCTCTCTCCTTCCTTCCCTT
CAATGCAGCGTACCTCCTCTCTCCCTCATAATTGTCTCAGCGGCCTCCTC
CTCCTTATAAATTTCTCTTTTTAAATTACCTCTGATCTCATCACAACAAT
TTCTGTCCGCCTTCCCTCCCTCCCTCCTTCTCTCCATCCCTCCCTCGTCT
GTCCAGGGGTTTCGCTTACGAAAGCCAAGGTTCCGTCTATTTCCGTGTTA
ACAAATTCCCCGCTTACGGGAAATTGGCTCGGCTGGATTTCTCAGGCATG
GAAAGAGGGGCAGGGGAGGGGGGAGGAATCAACGATGCAGACGAGTATGT
TGCAGAGAAGGGGGACGCAAAGGATTTTGCGCTGTGGAAGGCGTACAAAG
AGGAAGACGGGCCTGTGTTTTGGGAGACGGCACTGGGAAAGGGTCGGCCG
GGGTGGCACATCGAGTGTAGTGCTATGGCGAGGACATATCTGGGGTTAAC
TGTAGATGTGCACGCGGGAGGGGTTGATTTGGTTTTCCCTCATCATGAAA
ATGAGGTGGCACAGAGCGAAGCGGCGAATGGAGGGAAACGGTTTTGTAAC
TGTTGGGTCCACAACGGGTTTGTGAATGTGGAAAATGAGAAGATGTCGAA
GAGTAAGGGGAATTTCCTCACGTTGAAGGGGAGCTTGAAGGGAGGGTTGG
AGTTAAGAGCGTTTCGGTATTTGGTCGTTACGAGCCAATACCGGAGTCCG
TTGAATTTTAACAAGGAGGGCCTGGAGGGGGCAAAGAAGACGGTGATGAG
GCTGGATAAATTGAGAAAACGTTTGCTGGATGTGGTGGAGAAAGGGAAGG
AGGACGAGGGAGGGTTTGGGATGAAGGATGTGATTGAGAAAGCTTTGAAG
GGGTTTGAGGCGGGGATGGCGGATGATTTGAATACACCAAGGGCCGCGGC
TGCCTTGTTTACTTTGGTGAAAGGCGCGGAGAAAGCGTTAAAATCGACCC
CTCCCTTCCTCCCTCCCTCGGAGGCCCGCGAGGTTTTGGTGGCTTTGGAA
AGGATGGATGAAGTGTTGGGGATTTTTTATGACCCTCCCTCAGTGGAGGG
GGGGGTAGAGGGAGGGGAGGAGGGAGGGGGACCGGTGATTGTGGCTTTGA
ATGACTTGCCTGTGGAAGCGCAGGAGTTAGTAAGGAGGAGGGGAAAGGCG
AAGGAGAATAAAATCTGGGGGGAGGCAGATGGATGTAGGGATGCGTTGAA
GAGTAAATTTGGGGTGATTTTAAAGGATGTGAAGGGGGGAGAGGTGCAGA
TCATGAAGGAGGGGTAG back to topCoding sequence (CDS) from alignment at scaffold_2:449202..451118- >mRNA_793 ID=mRNA_793|Name=jgi.p|Nanoce1779_2|636094|organism=Nannochloropsis oceanica|type=CDS|length=4662bp|location=Sequence derived from alignment at scaffold_2:449202..451118- (Nannochloropsis oceanica)
GGGTTTCGCTTACGAAAGCCAAGGTTCCGTCTATTTCCGTGTTAACAAAT
TCCCCGCTTACGGGAAATTGGCTCGGCTGGATTTCTCAGGCATGGAAAGA
GGGGCAGGGGAGGGGGGAGGAATCAACGATGCAGACGAGTATGTTGCAGA
GAAGGGGGACGCAAAGGATTTTGCGCTGTGGAAGGCGTACAAAGAGGAAG
ACGGGCCTGTGTTTTGGGAGACGGCACTGGGAAAGGGTCGGCCGGGGTGG
CACATCGAGTGTAGTGCTATGGCGAGGACATATCTGGGGTTAACTGTAGA
TGTGCACGCGGGAGGGGTTGATTTGGTTTTCCCTCATCATGAAAATGAGG
TGGCACAGAGCGAAGCGGCGAATGGAGGGAAACGGTTTTGTAACTGTTGG
GTCCACAACGGGTTTGTGAATGTGGAAAATGAGAAGATGTCGAAGAGTAA
GGGGAATTTCCTCACGTTGAAGGGGAGCTTGAAGGGAGGGTTGGAGTTAA
GAGCGTTTCGGTATTTGGTCGTTACGAGCCAATACCGGAGTCCGTTGAAT
TTTAACAAGGAGGGCCTGGAGGGGGCAAAGAAGACGGTGATGAGGCTGGA
TAAATTGAGAAAACGTTTGCTGGATGTGGTGGAGAAAGGGAAGGAGGACG
AGGGAGGGTTTGGGATGAAGGATGTGATTGAGAAAGCTTTGAAGGGGTTT
GAGGCGGGGATGGCGGATGATTTGAATACACCAAGGGCCGCGGCTGCCTT
GTTTACTTTGGTGAAAGGCGCGGAGAAAGCGTTAAAATCGACCCCTCCCT
TCCTCCCTCCCTCGGAGGCCCGCGAGGTTTTGGTGGCTTTGGAAAGGATG
GATGAAGTGTTGGGGATTTTTTATGACCCTCCCTCAGTGGAGGGGGGGGT
AGAGGGAGGGGAGGAGGGAGGGGGACCGGTGATTGTGGCTTTGAATGACT
TGCCTGTGGAAGCGCAGGAGTTAGTAAGGAGGAGGGGAAAGGCGAAGGAG
AATAAAATCTGGGGGGAGGCAGATGGATGTAGGGATGCGTTGAAGAGTAA
ATTTGGGGTGATTTTAAAGGATGTGAAGGGGGGAGAGGTGCAGATCATGA
AGGAGGGGTAGAGGAACCCAGCAAAGTCTCCTTCTACAGCTGTGGCCCTA
CCATCTACGACTACGCGCACATCGGAAATTTTCGTGCCTTTCTCACCTAT
GACGTGCTTAAGCGGTGGCTGCTTTACTCGGGTTATAGCGTCGAACATAT
ATGTAATTTAACGGATGTGGACGATAAAATAATCAAGAGGATGGCGAGGG
ACAAAATATCCTTGCCGGAGCTGACGGAAAAATACGCCCAAGTATTCTTT
GAAGATTTGAAGGCATTGAATATCGTGCCTGCAAGTCGCTACCCGCGGGC
GACGGAGCATATTGATGACATAGTTCATATGGTGCAGGAATTGATGGAAC
GATGGCTGCTGATAATAATGCCCTGTCCCGCAAACTATTGACAAGCGACA
TACCTTTCCAGCTCTACAACACGGCCTCCAGAAAAAAGGAGCCATTCAAG
ACCGGGGTTTCGCTTACGAAAGCCAAGGTTCCGTCTATTTCCGTGTTAAC
AAATTCCCCGCTTACGGGAAATTGGCTCGGCTGGATTTCTCAGGCATGGA
AAGAGGGGCAGGGGAGGGGGGAGGAATCAACGATGCAGACGAGTATGTTG
CAGAGAAGGGGGACGCAAAGGATTTTGCGCTGTGGAAGGCGTACAAAGAG
GAAGACGGGCCTGTGTTTTGGGAGACGGCACTGGGAAAGGGTCGGCCGGG
GTGGCACATCGAGTGTAGTGCTATGGCGAGGACATATCTGGGGTTAACTG
TAGATGTGCACGCGGGAGGGGTTGATTTGGTTTTCCCTCATCATGAAAAT
GAGGTGGCACAGAGCGAAGCGGCGAATGGAGGGAAACGGTTTTGTAACTG
TTGGGTCCACAACGGGTTTGTGAATGTGGAAAATGAGAAGATGTCGAAGA
GTAAGGGGAATTTCCTCACGTTGAAGGGGAGCTTGAAGGGAGGGTTGGAG
TTAAGAGCGTTTCGGTATTTGGTCGTTACGAGCCAATACCGGAGTCCGTT
GAATTTTAACAAGGAGGGCCTGGAGGGGGCAAAGAAGACGGTGATGAGGC
TGGATAAATTGAGAAAACGTTTGCTGGATGTGGTGGAGAAAGGGAAGGAG
GACGAGGGAGGGTTTGGGATGAAGGATGTGATTGAGAAAGCTTTGAAGGG
GTTTGAGGCGGGGATGGCGGATGATTTGAATACACCAAGGGCCGCGGCTG
CCTTGTTTACTTTGGTGAAAGGCGCGGAGAAAGCGTTAAAATCGACCCCT
CCCTTCCTCCCTCCCTCGGAGGCCCGCGAGGTTTTGGTGGCTTTGGAAAG
GATGGATGAAGTGTTGGGGATTTTTTATGACCCTCCCTCAGTGGAGGGGG
GGGTAGAGGGAGGGGAGGAGGGAGGGGGACCGGTGATTGTGGCTTTGAAT
GACTTGCCTGTGGAAGCGCAGGAGTTAGTAAGGAGGAGGGGAAAGGCGAA
GGAGAATAAAATCTGGGGGGAGGCAGATGGATGTAGGGATGCGTTGAAGA
GTAAATTTGGGGTGATTTTAAAGGATGTGAAGGGGGGAGAGGTGCAGATC
ATGAAGGAGGGGTAGAGGAACCCAGCAAAGTCTCCTTCTACAGCTGTGGC
CCTACCATCTACGACTACGCGCACATCGGAAATTTTCGTGCCTTTCTCAC
CTATGACGTGCTTAAGCGGTGGCTGCTTTACTCGGGTTATAGCGTCGAAC
ATATATGTAATTTAACGGATGTGGACGATAAAATAATCAAGAGGATGGCG
AGGGACAAAATATCCTTGCCGGAGCTGACGGAAAAATACGCCCAAGTATT
CTTTGAAGATTTGAAGGCATTGAATATCGTGCCTGCAAGTCGCTACCCGC
GGGCGACGGAGCATATTGATGACATAGTTCATATGGTGCAGGAATTGATG
GAACGATGGCTGCTGATAATAATGCCCTGTCCCGCAAACTATTGACAAGC
GACATACCTTTCCAGCTCTACAACACGGCCTCCAGAAAAAAGGAGCCATT
CAAGACCGGGGTTTCGCTTACGAAAGCCAAGGTTCCGTCTATTTCCGTGT
TAACAAATTCCCCGCTTACGGGAAATTGGCTCGGCTGGATTTCTCAGGCA
TGGAAAGAGGGGCAGGGGAGGGGGGAGGAATCAACGATGCAGACGAGTAT
GTTGCAGAGAAGGGGGACGCAAAGGATTTTGCGCTGTGGAAGGCGTACAA
AGAGGAAGACGGGCCTGTGTTTTGGGAGACGGCACTGGGAAAGGGTCGGC
CGGGGTGGCACATCGAGTGTAGTGCTATGGCGAGGACATATCTGGGGTTA
ACTGTAGATGTGCACGCGGGAGGGGTTGATTTGGTTTTCCCTCATCATGA
AAATGAGGTGGCACAGAGCGAAGCGGCGAATGGAGGGAAACGGTTTTGTA
ACTGTTGGGTCCACAACGGGTTTGTGAATGTGGAAAATGAGAAGATGTCG
AAGAGTAAGGGGAATTTCCTCACGTTGAAGGGGAGCTTGAAGGGAGGGTT
GGAGTTAAGAGCGTTTCGGTATTTGGTCGTTACGAGCCAATACCGGAGTC
CGTTGAATTTTAACAAGGAGGGCCTGGAGGGGGCAAAGAAGACGGTGATG
AGGCTGGATAAATTGAGAAAACGTTTGCTGGATGTGGTGGAGAAAGGGAA
GGAGGACGAGGGAGGGTTTGGGATGAAGGATGTGATTGAGAAAGCTTTGA
AGGGGTTTGAGGCGGGGATGGCGGATGATTTGAATACACCAAGGGCCGCG
GCTGCCTTGTTTACTTTGGTGAAAGGCGCGGAGAAAGCGTTAAAATCGAC
CCCTCCCTTCCTCCCTCCCTCGGAGGCCCGCGAGGTTTTGGTGGCTTTGG
AAAGGATGGATGAAGTGTTGGGGATTTTTTATGACCCTCCCTCAGTGGAG
GGGGGGGTAGAGGGAGGGGAGGAGGGAGGGGGACCGGTGATTGTGGCTTT
GAATGACTTGCCTGTGGAAGCGCAGGAGTTAGTAAGGAGGAGGGGAAAGG
CGAAGGAGAATAAAATCTGGGGGGAGGCAGATGGATGTAGGGATGCGTTG
AAGAGTAAATTTGGGGTGATTTTAAAGGATGTGAAGGGGGGAGAGGTGCA
GATCATGAAGGAGGGGTAGAGGAACCCAGCAAAGTCTCCTTCTACAGCTG
TGGCCCTACCATCTACGACTACGCGCACATCGGAAATTTTCGTGCCTTTC
TCACCTATGACGTGCTTAAGCGGTGGCTGCTTTACTCGGGTTATAGCGTC
GAACATATATGTAATTTAACGGATGTGGACGATAAAATAATCAAGAGGAT
GGCGAGGGACAAAATATCCTTGCCGGAGCTGACGGAAAAATACGCCCAAG
TATTCTTTGAAGATTTGAAGGCATTGAATATCGTGCCTGCAAGTCGCTAC
CCGCGGGCGACGGAGCATATTGATGACATAGTTCATATGGTGCAGGAATT
GATGGAACGATGGCTGCTGATAATAATGCCCTGTCCCGCAAACTATTGAC
AAGCGACATACCTTTCCAGCTCTACAACACGGCCTCCAGAAAAAAGGAGC
CATTCAAGACCG back to top
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