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Properties
Property Name | Value |
TranscriptId | 568308 |
Track | FilteredModels2 |
ProteinId | 568222 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_22 | supercontig | scaffold_22:181444..184404 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7924 ID=mRNA_7924|Name=jgi.p|Nanoce1779_2|568222|organism=Nannochloropsis oceanica|type=mRNA|length=2961bp ATGGGCAGCTCACGGCCCATTCATCCCACCGGGAGCCTCCGCAGCCACCA ACGAGACGAGTTTGGTCGCACGGAGCGGGCGCGAAGCCGGAGCTCTAGTC ACCTGCGGCATACCCGTGGTGGGAGTACCGACTTTGTGGAGCCTGTTCCA ATCCCCCCTTCCTCCCTCCTCCGTGACTGGCTTCAGGCAGCGTGGGCTTC CCGCCAATGCCGATGGGGCATTGGTCTCTTCTTTACGGGCTTAGTCCTGG TAGCGATTGCGGCCGTGACGGATATCGAGGGGAATGCTTTTCGGAACGCC GAGATCCGTAAGGTGGTCGTGGTAGACTCTCCCAACCATCCCGAGTTCAA GGCCTGGGCGACGGGCGAGCAGCAGAGGACGCCGCTGTTCTACACCTACC ACCTGTATAACATAACCAACCCTACCCTGTTCCTGGCGGGACAGCCACCC GCGGTGCAGGAGGTAGGGCCCTTCACCTTTCAGCAGAGAACGAAGAAGGT AAATGTCACCTTTTCGGACGAAGGTCGGTTGGTCACGTACATAACACAGA CGCAACATGACTTTGTGGGGGACCCCGTCACGCTGGACACGCAGTCGGTC TACTTCTTTAACCTCCCCTATTCCGTCGCTGTCTACACGGCCGGTAGCGA GACGAATCTCCTCAAGATTGGCTCACAACAGGCCTTGGCCGAGATTTTAT ATCAGATGCAGACCTACTTCTTGCCTACCCTCAAGGAGAATGCTGTGGTG ATGGCCATTCAGATGGCAGTGGACGCGATGACCCAAATCCTCGATGCGAT GCAAGCCCCCGCCGACGCCACTCCCACCCGATGGGGCGGTGGATGCACTA GCAACATGTTTGGAAAGATCTGTGGGTTTGACGCCGCTGCTAATTTCTTC AAGGTTGTGGATCGAAAGAACAAGATGGATTTAAACCTGCTGCAGCTGTG CATCAACACCAAACTGACCGAAGCGGAGCGCATTCCTTTGGCAACAGTGC GGCGGCTATGGAACCCGGACGATGAGTACGCAATTTTCAACATTGGTCGG GCCAGTGCTTCGGAGCGGTATGGCATCTCGTATTGGCTTTGGGGGGACGC CGACGTCCAGGATGCCATTACGAGGCATTTTGGCTTAACCAATCGGCAGT ACAACGCGTTGCGGGTGTATTTGTTGGAGATATACCGGAACCCGATGCTG GAAATTGCAACGGTCAAAATCTTCAAGGAAAGCCTCCAGCCTGAAGATGC GGGTACGGCGGAAGTGAACCAATGGAGCGATTTTATGTGGCGGCAGTGGG CTGTGGGGGACGTGATTACCCGCCTCAAGAACGAGTCAATGGCCAAGCCA GAAAGCATGCAGCCGGAGCTCCCGCCTGAGTTCGCGTGGTATGCGGAAAA GGCGGGGATGCAGACGTTCATGTACGGAGGCAAGCGCTGGAACAAAACGC AGGCGAAGTGCACCTTTGACCTGGTGAAGCGGCCCATGATCTACTTTCAA ACGCATGTGTTGGGTCTGCCGGGGCCAAGCATTAGCCGCCCAACCTTCGT CGACTTCGGTTTAGAGGATGCCGGCGAGATCCTGGCTGATCCTCGGGATT GTTTTCAGTCCAAGACCGACTGGGGCCTGCTGCAAGGCTATCTAGCCGGT TTGGCGGAGGATTTTGTTGCTCCCTTGCTCGAAGAGGACGTAATCAGCAA CAACGGTGGACTGATTACGAAGCGGACGTTGCGAGAGTCCCTGTATGGGT ACGCCGCTCCCATTTTGCAGCTGAGTCTGGCAAAGGACGATCCTCGAGCT ATGAAGTTTAATATGTTGGCCAACGACCCAAGCTTGGATGGCCCTGCGCG TTGCCTTTCCTCGAGTGACGTGGAAAACCCCTTCACGGCTTGTCGATTCG CTTCGCTCAACACTACCACAAACGCGGATGGGAGCGTGCGCTCTGCTCGG GTCTTTGCCAAAGTGCCCAACACATACCATACCGGCAAGGACGACGACAA GCGCGCAGGGGCTTTCTTTACATACCACGGTGATCGCAATATTGCCGACA TCTGGCCGGGTGGCACCATCCCCTTTGCGGGAGGAGCCCAGGACCTACCT GGTTCGGTGCAGTTCGGCTATTCAGATGGAATGCAGTTCCCGCCCTTTGG TGCCATTGATAAGCCCGGCGCGGTCCTGTCTGTCTTTGTGCCGGGCTTCG TCCTGCCGCTACGTTTTGCCTTTTCAGAGGATGTGGTTGTAGAGGGCATT AAACTCAAGCGTTTCCGTGTGGTGCCAGAGACATTTAGCAGCTCTCGTAG CGACGCTAAGACCTTCGATATGGACCAGGTGAAGCAGGATGGCCTCTTTA ATCTCACAGGCATTATGACGGGCGTGACCTATTTTAGCAAGCCGCATTTT CGCCCAAGCAAACCTTTTGACATGGCTGATATTGATGGTCTCGCTGCCTT TGATCCTGTCCGCGACGACAGTTATATTGACGTAGAGCCTATAACTGGCA AGACCATGAACGCCGACATCAAACTGCAGCTCAACGCCGGGACCACCCCG GGAGTTTTTGACCAATTTCACAAGACTGTTTATCCTGTTAAGGCCTTACC AGTTCTCCACGTTGCTCAGCACGCCAGCGTCGTTCCTTTTGACGCCAAGT TCTTCAAACGCATGGTGTATGGCACCGAGAAGCTGATCAAACTCACCACC ATCGTGTCTGCCTGTCTGGGCGCGTTGTTCTTGGTGGTTGGCCTAGCGCT GATTATGCTGCATGCCATCCGGCACGGCGCCGCAGTAGCAGCAGCAGAAG CAGGAGTGGAGGGAATGATCAAAGCATATCCTTCTGGTGATGACGTGCTG GTTGGAGAGGGAGATGTGGAGATGGCCACCACCGCAAGTATGCGCAAGAG CTCGTCGGTTGCTGGGGTAGCACCACCGCCCAAGCCACCGTCGCGGCGGG GTAGGCTTTGA back to topprotein sequence of jgi.p|Nanoce1779_2|568222 >mRNA_7924-protein ID=mRNA_7924-protein|Name=jgi.p|Nanoce1779_2|568222|organism=Nannochloropsis oceanica|type=polypeptide|length=987bp MGSSRPIHPTGSLRSHQRDEFGRTERARSRSSSHLRHTRGGSTDFVEPVP IPPSSLLRDWLQAAWASRQCRWGIGLFFTGLVLVAIAAVTDIEGNAFRNA EIRKVVVVDSPNHPEFKAWATGEQQRTPLFYTYHLYNITNPTLFLAGQPP AVQEVGPFTFQQRTKKVNVTFSDEGRLVTYITQTQHDFVGDPVTLDTQSV YFFNLPYSVAVYTAGSETNLLKIGSQQALAEILYQMQTYFLPTLKENAVV MAIQMAVDAMTQILDAMQAPADATPTRWGGGCTSNMFGKICGFDAAANFF KVVDRKNKMDLNLLQLCINTKLTEAERIPLATVRRLWNPDDEYAIFNIGR ASASERYGISYWLWGDADVQDAITRHFGLTNRQYNALRVYLLEIYRNPML EIATVKIFKESLQPEDAGTAEVNQWSDFMWRQWAVGDVITRLKNESMAKP ESMQPELPPEFAWYAEKAGMQTFMYGGKRWNKTQAKCTFDLVKRPMIYFQ THVLGLPGPSISRPTFVDFGLEDAGEILADPRDCFQSKTDWGLLQGYLAG LAEDFVAPLLEEDVISNNGGLITKRTLRESLYGYAAPILQLSLAKDDPRA MKFNMLANDPSLDGPARCLSSSDVENPFTACRFASLNTTTNADGSVRSAR VFAKVPNTYHTGKDDDKRAGAFFTYHGDRNIADIWPGGTIPFAGGAQDLP GSVQFGYSDGMQFPPFGAIDKPGAVLSVFVPGFVLPLRFAFSEDVVVEGI KLKRFRVVPETFSSSRSDAKTFDMDQVKQDGLFNLTGIMTGVTYFSKPHF RPSKPFDMADIDGLAAFDPVRDDSYIDVEPITGKTMNADIKLQLNAGTTP GVFDQFHKTVYPVKALPVLHVAQHASVVPFDAKFFKRMVYGTEKLIKLTT IVSACLGALFLVVGLALIMLHAIRHGAAVAAAEAGVEGMIKAYPSGDDVL VGEGDVEMATTASMRKSSSVAGVAPPPKPPSRRGRL* back to topmRNA from alignment at scaffold_22:181444..184404- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7924 ID=mRNA_7924|Name=jgi.p|Nanoce1779_2|568222|organism=Nannochloropsis oceanica|type=mRNA|length=2961bp|location=Sequence derived from alignment at scaffold_22:181444..184404- (Nannochloropsis oceanica) ATGGGCAGCTCACGGCCCATTCATCCCACCGGGAGCCTCCGCAGCCACCA
ACGAGACGAGTTTGGTCGCACGGAGCGGGCGCGAAGCCGGAGCTCTAGTC
ACCTGCGGCATACCCGTGGTGGGAGTACCGACTTTGTGGAGCCTGTTCCA
ATCCCCCCTTCCTCCCTCCTCCGTGACTGGCTTCAGGCAGCGTGGGCTTC
CCGCCAATGCCGATGGGGCATTGGTCTCTTCTTTACGGGCTTAGTCCTGG
TAGCGATTGCGGCCGTGACGGATATCGAGGGGAATGCTTTTCGGAACGCC
GAGATCCGTAAGGTGGTCGTGGTAGACTCTCCCAACCATCCCGAGTTCAA
GGCCTGGGCGACGGGCGAGCAGCAGAGGACGCCGCTGTTCTACACCTACC
ACCTGTATAACATAACCAACCCTACCCTGTTCCTGGCGGGACAGCCACCC
GCGGTGCAGGAGGTAGGGCCCTTCACCTTTCAGCAGAGAACGAAGAAGGT
AAATGTCACCTTTTCGGACGAAGGTCGGTTGGTCACGTACATAACACAGA
CGCAACATGACTTTGTGGGGGACCCCGTCACGCTGGACACGCAGTCGGTC
TACTTCTTTAACCTCCCCTATTCCGTCGCTGTCTACACGGCCGGTAGCGA
GACGAATCTCCTCAAGATTGGCTCACAACAGGCCTTGGCCGAGATTTTAT
ATCAGATGCAGACCTACTTCTTGCCTACCCTCAAGGAGAATGCTGTGGTG
ATGGCCATTCAGATGGCAGTGGACGCGATGACCCAAATCCTCGATGCGAT
GCAAGCCCCCGCCGACGCCACTCCCACCCGATGGGGCGGTGGATGCACTA
GCAACATGTTTGGAAAGATCTGTGGGTTTGACGCCGCTGCTAATTTCTTC
AAGGTTGTGGATCGAAAGAACAAGATGGATTTAAACCTGCTGCAGCTGTG
CATCAACACCAAACTGACCGAAGCGGAGCGCATTCCTTTGGCAACAGTGC
GGCGGCTATGGAACCCGGACGATGAGTACGCAATTTTCAACATTGGTCGG
GCCAGTGCTTCGGAGCGGTATGGCATCTCGTATTGGCTTTGGGGGGACGC
CGACGTCCAGGATGCCATTACGAGGCATTTTGGCTTAACCAATCGGCAGT
ACAACGCGTTGCGGGTGTATTTGTTGGAGATATACCGGAACCCGATGCTG
GAAATTGCAACGGTCAAAATCTTCAAGGAAAGCCTCCAGCCTGAAGATGC
GGGTACGGCGGAAGTGAACCAATGGAGCGATTTTATGTGGCGGCAGTGGG
CTGTGGGGGACGTGATTACCCGCCTCAAGAACGAGTCAATGGCCAAGCCA
GAAAGCATGCAGCCGGAGCTCCCGCCTGAGTTCGCGTGGTATGCGGAAAA
GGCGGGGATGCAGACGTTCATGTACGGAGGCAAGCGCTGGAACAAAACGC
AGGCGAAGTGCACCTTTGACCTGGTGAAGCGGCCCATGATCTACTTTCAA
ACGCATGTGTTGGGTCTGCCGGGGCCAAGCATTAGCCGCCCAACCTTCGT
CGACTTCGGTTTAGAGGATGCCGGCGAGATCCTGGCTGATCCTCGGGATT
GTTTTCAGTCCAAGACCGACTGGGGCCTGCTGCAAGGCTATCTAGCCGGT
TTGGCGGAGGATTTTGTTGCTCCCTTGCTCGAAGAGGACGTAATCAGCAA
CAACGGTGGACTGATTACGAAGCGGACGTTGCGAGAGTCCCTGTATGGGT
ACGCCGCTCCCATTTTGCAGCTGAGTCTGGCAAAGGACGATCCTCGAGCT
ATGAAGTTTAATATGTTGGCCAACGACCCAAGCTTGGATGGCCCTGCGCG
TTGCCTTTCCTCGAGTGACGTGGAAAACCCCTTCACGGCTTGTCGATTCG
CTTCGCTCAACACTACCACAAACGCGGATGGGAGCGTGCGCTCTGCTCGG
GTCTTTGCCAAAGTGCCCAACACATACCATACCGGCAAGGACGACGACAA
GCGCGCAGGGGCTTTCTTTACATACCACGGTGATCGCAATATTGCCGACA
TCTGGCCGGGTGGCACCATCCCCTTTGCGGGAGGAGCCCAGGACCTACCT
GGTTCGGTGCAGTTCGGCTATTCAGATGGAATGCAGTTCCCGCCCTTTGG
TGCCATTGATAAGCCCGGCGCGGTCCTGTCTGTCTTTGTGCCGGGCTTCG
TCCTGCCGCTACGTTTTGCCTTTTCAGAGGATGTGGTTGTAGAGGGCATT
AAACTCAAGCGTTTCCGTGTGGTGCCAGAGACATTTAGCAGCTCTCGTAG
CGACGCTAAGACCTTCGATATGGACCAGGTGAAGCAGGATGGCCTCTTTA
ATCTCACAGGCATTATGACGGGCGTGACCTATTTTAGCAAGCCGCATTTT
CGCCCAAGCAAACCTTTTGACATGGCTGATATTGATGGTCTCGCTGCCTT
TGATCCTGTCCGCGACGACAGTTATATTGACGTAGAGCCTATAACTGGCA
AGACCATGAACGCCGACATCAAACTGCAGCTCAACGCCGGGACCACCCCG
GGAGTTTTTGACCAATTTCACAAGACTGTTTATCCTGTTAAGGCCTTACC
AGTTCTCCACGTTGCTCAGCACGCCAGCGTCGTTCCTTTTGACGCCAAGT
TCTTCAAACGCATGGTGTATGGCACCGAGAAGCTGATCAAACTCACCACC
ATCGTGTCTGCCTGTCTGGGCGCGTTGTTCTTGGTGGTTGGCCTAGCGCT
GATTATGCTGCATGCCATCCGGCACGGCGCCGCAGTAGCAGCAGCAGAAG
CAGGAGTGGAGGGAATGATCAAAGCATATCCTTCTGGTGATGACGTGCTG
GTTGGAGAGGGAGATGTGGAGATGGCCACCACCGCAAGTATGCGCAAGAG
CTCGTCGGTTGCTGGGGTAGCACCACCGCCCAAGCCACCGTCGCGGCGGG
GTAGGCTTTGA back to topCoding sequence (CDS) from alignment at scaffold_22:181444..184404- >mRNA_7924 ID=mRNA_7924|Name=jgi.p|Nanoce1779_2|568222|organism=Nannochloropsis oceanica|type=CDS|length=2961bp|location=Sequence derived from alignment at scaffold_22:181444..184404- (Nannochloropsis oceanica) ATGGGCAGCTCACGGCCCATTCATCCCACCGGGAGCCTCCGCAGCCACCA ACGAGACGAGTTTGGTCGCACGGAGCGGGCGCGAAGCCGGAGCTCTAGTC ACCTGCGGCATACCCGTGGTGGGAGTACCGACTTTGTGGAGCCTGTTCCA ATCCCCCCTTCCTCCCTCCTCCGTGACTGGCTTCAGGCAGCGTGGGCTTC CCGCCAATGCCGATGGGGCATTGGTCTCTTCTTTACGGGCTTAGTCCTGG TAGCGATTGCGGCCGTGACGGATATCGAGGGGAATGCTTTTCGGAACGCC GAGATCCGTAAGGTGGTCGTGGTAGACTCTCCCAACCATCCCGAGTTCAA GGCCTGGGCGACGGGCGAGCAGCAGAGGACGCCGCTGTTCTACACCTACC ACCTGTATAACATAACCAACCCTACCCTGTTCCTGGCGGGACAGCCACCC GCGGTGCAGGAGGTAGGGCCCTTCACCTTTCAGCAGAGAACGAAGAAGGT AAATGTCACCTTTTCGGACGAAGGTCGGTTGGTCACGTACATAACACAGA CGCAACATGACTTTGTGGGGGACCCCGTCACGCTGGACACGCAGTCGGTC TACTTCTTTAACCTCCCCTATTCCGTCGCTGTCTACACGGCCGGTAGCGA GACGAATCTCCTCAAGATTGGCTCACAACAGGCCTTGGCCGAGATTTTAT ATCAGATGCAGACCTACTTCTTGCCTACCCTCAAGGAGAATGCTGTGGTG ATGGCCATTCAGATGGCAGTGGACGCGATGACCCAAATCCTCGATGCGAT GCAAGCCCCCGCCGACGCCACTCCCACCCGATGGGGCGGTGGATGCACTA GCAACATGTTTGGAAAGATCTGTGGGTTTGACGCCGCTGCTAATTTCTTC AAGGTTGTGGATCGAAAGAACAAGATGGATTTAAACCTGCTGCAGCTGTG CATCAACACCAAACTGACCGAAGCGGAGCGCATTCCTTTGGCAACAGTGC GGCGGCTATGGAACCCGGACGATGAGTACGCAATTTTCAACATTGGTCGG GCCAGTGCTTCGGAGCGGTATGGCATCTCGTATTGGCTTTGGGGGGACGC CGACGTCCAGGATGCCATTACGAGGCATTTTGGCTTAACCAATCGGCAGT ACAACGCGTTGCGGGTGTATTTGTTGGAGATATACCGGAACCCGATGCTG GAAATTGCAACGGTCAAAATCTTCAAGGAAAGCCTCCAGCCTGAAGATGC GGGTACGGCGGAAGTGAACCAATGGAGCGATTTTATGTGGCGGCAGTGGG CTGTGGGGGACGTGATTACCCGCCTCAAGAACGAGTCAATGGCCAAGCCA GAAAGCATGCAGCCGGAGCTCCCGCCTGAGTTCGCGTGGTATGCGGAAAA GGCGGGGATGCAGACGTTCATGTACGGAGGCAAGCGCTGGAACAAAACGC AGGCGAAGTGCACCTTTGACCTGGTGAAGCGGCCCATGATCTACTTTCAA ACGCATGTGTTGGGTCTGCCGGGGCCAAGCATTAGCCGCCCAACCTTCGT CGACTTCGGTTTAGAGGATGCCGGCGAGATCCTGGCTGATCCTCGGGATT GTTTTCAGTCCAAGACCGACTGGGGCCTGCTGCAAGGCTATCTAGCCGGT TTGGCGGAGGATTTTGTTGCTCCCTTGCTCGAAGAGGACGTAATCAGCAA CAACGGTGGACTGATTACGAAGCGGACGTTGCGAGAGTCCCTGTATGGGT ACGCCGCTCCCATTTTGCAGCTGAGTCTGGCAAAGGACGATCCTCGAGCT ATGAAGTTTAATATGTTGGCCAACGACCCAAGCTTGGATGGCCCTGCGCG TTGCCTTTCCTCGAGTGACGTGGAAAACCCCTTCACGGCTTGTCGATTCG CTTCGCTCAACACTACCACAAACGCGGATGGGAGCGTGCGCTCTGCTCGG GTCTTTGCCAAAGTGCCCAACACATACCATACCGGCAAGGACGACGACAA GCGCGCAGGGGCTTTCTTTACATACCACGGTGATCGCAATATTGCCGACA TCTGGCCGGGTGGCACCATCCCCTTTGCGGGAGGAGCCCAGGACCTACCT GGTTCGGTGCAGTTCGGCTATTCAGATGGAATGCAGTTCCCGCCCTTTGG TGCCATTGATAAGCCCGGCGCGGTCCTGTCTGTCTTTGTGCCGGGCTTCG TCCTGCCGCTACGTTTTGCCTTTTCAGAGGATGTGGTTGTAGAGGGCATT AAACTCAAGCGTTTCCGTGTGGTGCCAGAGACATTTAGCAGCTCTCGTAG CGACGCTAAGACCTTCGATATGGACCAGGTGAAGCAGGATGGCCTCTTTA ATCTCACAGGCATTATGACGGGCGTGACCTATTTTAGCAAGCCGCATTTT CGCCCAAGCAAACCTTTTGACATGGCTGATATTGATGGTCTCGCTGCCTT TGATCCTGTCCGCGACGACAGTTATATTGACGTAGAGCCTATAACTGGCA AGACCATGAACGCCGACATCAAACTGCAGCTCAACGCCGGGACCACCCCG GGAGTTTTTGACCAATTTCACAAGACTGTTTATCCTGTTAAGGCCTTACC AGTTCTCCACGTTGCTCAGCACGCCAGCGTCGTTCCTTTTGACGCCAAGT TCTTCAAACGCATGGTGTATGGCACCGAGAAGCTGATCAAACTCACCACC ATCGTGTCTGCCTGTCTGGGCGCGTTGTTCTTGGTGGTTGGCCTAGCGCT GATTATGCTGCATGCCATCCGGCACGGCGCCGCAGTAGCAGCAGCAGAAG CAGGAGTGGAGGGAATGATCAAAGCATATCCTTCTGGTGATGACGTGCTG GTTGGAGAGGGAGATGTGGAGATGGCCACCACCGCAAGTATGCGCAAGAG CTCGTCGGTTGCTGGGGTAGCACCACCGCCCAAGCCACCGTCGCGGCGGG GTAGGCTTTGA back to top
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