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Properties
| Property Name | Value |
|---|
| TranscriptId | 600618 |
| Track | FilteredModels2 |
| ProteinId | 600532 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_22 | supercontig | scaffold_22:174331..175610 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7921 ID=mRNA_7921|Name=jgi.p|Nanoce1779_2|600532|organism=Nannochloropsis oceanica|type=mRNA|length=1280bp
ACAGAGGAGACCCAATCGGAGCCCGGCCCACACCTCATACAGAGTTGATA
AAAAGCAAAGGCATGGTGCCTACTGTAGAAGGGGCCTATAATGACACCCA
AGAGCTGCCAACGATGGCCGCTTGCAAACCCGACGGAAGTATGAGCAGCA
CTAGCGCCATCCAGGAGAGCACCACCCCTCCCACTCCCTTTCCCCCTCCC
GCCGACACCGCCACCCCGGCCAGTGACCCAGAGGAGGAGGAAGGCCGCTC
CGGTTCTTCACAGTTGGACCACTCCAACAGTGCGTCGTCGATTGCCACTT
CGGCGTCGGCCGCCATCCAAGCCATCAAAGGCACTCTTTACCCGGCCAGT
GGGACTTTCCGGGGGGTAAGCGTTGCGGAGGAGATGAACCCCCTGCGAAG
GAGTACCATGGAAGATGTCCACAGAGTCCTACCGGTGTTTGACGATGATG
CGAGTATGAGTTTTGTGGGTATTTACGACGGGCATGGAGGGAGAGATATC
GTTGATTTCCTCTCCACAGAGTTGGAGAAGAATATAGCCCAGGAACTCAA
GGTAGAGGATGGGGCATCCATACCCGACAAACTGGCCAGGGCGTATATAT
TGACCGACGTGCAGTCATGCCAAGCAGAGCTGATGGGCTCGGGAGCCACG
GCCGTGACGTGCCTTATAAAAAAATCAATGGTGGAGCGTGAGGATGGAAG
GGAAGAGCAGATCCGTGAGATATACGCGGCGAATGTAGGGGACAGTCGCG
CGGTACTGTGTAGGGAGGGAAGGGGGGTGAGGTTATCGTATGACCACAAG
GCAGACGATGGGGCAGAGCAGGCGCGGATTGAGGCGGCAGGAGGATTTGT
CCTCCGGAATCGTGTCTTGGGTATTTTGGCTGTAACGAGGAGTTTTGGGG
ACCATCGACTGAAGGACTATGTGGTGGGCTTGCCCTACACCTCGACGACG
GTTGTGCGGGAGGAGGAAGAAGGTGTAGAAGGAAAAGAAGACAAAAGGGA
GAGAGGGGGAGACTCTTTTTTGATCTTGGCCTGTGATGGGGTCTGGGATG
TGTTGAGCGATGACGAGGCGGTGGGGCTGGTCATGGCGCTGTGGGAGAGC
GAGGGAGGGAGGGTGGACGTGGATGCAGCGGGGTTGTTGGTGCAGGAGGC
GATGAGGAGGGGCAGCTCGGATAACATTACATGTGTGGTGGTCTTTCTGT
AACGGAGGAGGGAGAGAGGGAGGGAGGGGTTGGGTTTACATTGACAAAGA
GGAGAGGAGGAGGAGGAGAAACTGTTGAGA back to topprotein sequence of jgi.p|Nanoce1779_2|600532 >mRNA_7921-protein ID=mRNA_7921-protein|Name=jgi.p|Nanoce1779_2|600532|organism=Nannochloropsis oceanica|type=polypeptide|length=380bp
MVPTVEGAYNDTQELPTMAACKPDGSMSSTSAIQESTTPPTPFPPPADTA
TPASDPEEEEGRSGSSQLDHSNSASSIATSASAAIQAIKGTLYPASGTFR
GVSVAEEMNPLRRSTMEDVHRVLPVFDDDASMSFVGIYDGHGGRDIVDFL
STELEKNIAQELKVEDGASIPDKLARAYILTDVQSCQAELMGSGATAVTC
LIKKSMVEREDGREEQIREIYAANVGDSRAVLCREGRGVRLSYDHKADDG
AEQARIEAAGGFVLRNRVLGILAVTRSFGDHRLKDYVVGLPYTSTTVVRE
EEEGVEGKEDKRERGGDSFLILACDGVWDVLSDDEAVGLVMALWESEGGR
VDVDAAGLLVQEAMRRGSSDNITCVVVFL* back to topmRNA from alignment at scaffold_22:174331..175610- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7921 ID=mRNA_7921|Name=jgi.p|Nanoce1779_2|600532|organism=Nannochloropsis oceanica|type=mRNA|length=1280bp|location=Sequence derived from alignment at scaffold_22:174331..175610- (Nannochloropsis oceanica)
ACAGAGGAGACCCAATCGGAGCCCGGCCCACACCTCATACAGAGTTGATA
AAAAGCAAAGGCATGGTGCCTACTGTAGAAGGGGCCTATAATGACACCCA
AGAGCTGCCAACGATGGCCGCTTGCAAACCCGACGGAAGTATGAGCAGCA
CTAGCGCCATCCAGGAGAGCACCACCCCTCCCACTCCCTTTCCCCCTCCC
GCCGACACCGCCACCCCGGCCAGTGACCCAGAGGAGGAGGAAGGCCGCTC
CGGTTCTTCACAGTTGGACCACTCCAACAGTGCGTCGTCGATTGCCACTT
CGGCGTCGGCCGCCATCCAAGCCATCAAAGGCACTCTTTACCCGGCCAGT
GGGACTTTCCGGGGGGTAAGCGTTGCGGAGGAGATGAACCCCCTGCGAAG
GAGTACCATGGAAGATGTCCACAGAGTCCTACCGGTGTTTGACGATGATG
CGAGTATGAGTTTTGTGGGTATTTACGACGGGCATGGAGGGAGAGATATC
GTTGATTTCCTCTCCACAGAGTTGGAGAAGAATATAGCCCAGGAACTCAA
GGTAGAGGATGGGGCATCCATACCCGACAAACTGGCCAGGGCGTATATAT
TGACCGACGTGCAGTCATGCCAAGCAGAGCTGATGGGCTCGGGAGCCACG
GCCGTGACGTGCCTTATAAAAAAATCAATGGTGGAGCGTGAGGATGGAAG
GGAAGAGCAGATCCGTGAGATATACGCGGCGAATGTAGGGGACAGTCGCG
CGGTACTGTGTAGGGAGGGAAGGGGGGTGAGGTTATCGTATGACCACAAG
GCAGACGATGGGGCAGAGCAGGCGCGGATTGAGGCGGCAGGAGGATTTGT
CCTCCGGAATCGTGTCTTGGGTATTTTGGCTGTAACGAGGAGTTTTGGGG
ACCATCGACTGAAGGACTATGTGGTGGGCTTGCCCTACACCTCGACGACG
GTTGTGCGGGAGGAGGAAGAAGGTGTAGAAGGAAAAGAAGACAAAAGGGA
GAGAGGGGGAGACTCTTTTTTGATCTTGGCCTGTGATGGGGTCTGGGATG
TGTTGAGCGATGACGAGGCGGTGGGGCTGGTCATGGCGCTGTGGGAGAGC
GAGGGAGGGAGGGTGGACGTGGATGCAGCGGGGTTGTTGGTGCAGGAGGC
GATGAGGAGGGGCAGCTCGGATAACATTACATGTGTGGTGGTCTTTCTGT
AACGGAGGAGGGAGAGAGGGAGGGAGGGGTTGGGTTTACATTGACAAAGA
GGAGAGGAGGAGGAGGAGAAACTGTTGAGA back to topCoding sequence (CDS) from alignment at scaffold_22:174331..175610- >mRNA_7921 ID=mRNA_7921|Name=jgi.p|Nanoce1779_2|600532|organism=Nannochloropsis oceanica|type=CDS|length=1140bp|location=Sequence derived from alignment at scaffold_22:174331..175610- (Nannochloropsis oceanica)
ATGGTGCCTACTGTAGAAGGGGCCTATAATGACACCCAAGAGCTGCCAAC
GATGGCCGCTTGCAAACCCGACGGAAGTATGAGCAGCACTAGCGCCATCC
AGGAGAGCACCACCCCTCCCACTCCCTTTCCCCCTCCCGCCGACACCGCC
ACCCCGGCCAGTGACCCAGAGGAGGAGGAAGGCCGCTCCGGTTCTTCACA
GTTGGACCACTCCAACAGTGCGTCGTCGATTGCCACTTCGGCGTCGGCCG
CCATCCAAGCCATCAAAGGCACTCTTTACCCGGCCAGTGGGACTTTCCGG
GGGGTAAGCGTTGCGGAGGAGATGAACCCCCTGCGAAGGAGTACCATGGA
AGATGTCCACAGAGTCCTACCGGTGTTTGACGATGATGCGAGTATGAGTT
TTGTGGGTATTTACGACGGGCATGGAGGGAGAGATATCGTTGATTTCCTC
TCCACAGAGTTGGAGAAGAATATAGCCCAGGAACTCAAGGTAGAGGATGG
GGCATCCATACCCGACAAACTGGCCAGGGCGTATATATTGACCGACGTGC
AGTCATGCCAAGCAGAGCTGATGGGCTCGGGAGCCACGGCCGTGACGTGC
CTTATAAAAAAATCAATGGTGGAGCGTGAGGATGGAAGGGAAGAGCAGAT
CCGTGAGATATACGCGGCGAATGTAGGGGACAGTCGCGCGGTACTGTGTA
GGGAGGGAAGGGGGGTGAGGTTATCGTATGACCACAAGGCAGACGATGGG
GCAGAGCAGGCGCGGATTGAGGCGGCAGGAGGATTTGTCCTCCGGAATCG
TGTCTTGGGTATTTTGGCTGTAACGAGGAGTTTTGGGGACCATCGACTGA
AGGACTATGTGGTGGGCTTGCCCTACACCTCGACGACGGTTGTGCGGGAG
GAGGAAGAAGGTGTAGAAGGAAAAGAAGACAAAAGGGAGAGAGGGGGAGA
CTCTTTTTTGATCTTGGCCTGTGATGGGGTCTGGGATGTGTTGAGCGATG
ACGAGGCGGTGGGGCTGGTCATGGCGCTGTGGGAGAGCGAGGGAGGGAGG
GTGGACGTGGATGCAGCGGGGTTGTTGGTGCAGGAGGCGATGAGGAGGGG
CAGCTCGGATAACATTACATGTGTGGTGGTCTTTCTGTAA back to top
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