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Properties
| Property Name | Value |
|---|
| TranscriptId | 176195 |
| Track | FilteredModels2 |
| ProteinId | 176109 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_22 | supercontig | scaffold_22:137430..139434 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7907 ID=mRNA_7907|Name=jgi.p|Nanoce1779_2|176109|organism=Nannochloropsis oceanica|type=mRNA|length=1111bp
TCCGTTGAACGGCAGTGTAGCCGCTGACTCCCCATCCCTACCTCTCCCAT
CCCCAACCCACCAACTACAACAGCACCACCGACATGGTTCGACCCCGCGC
CGGCCCTTCAGCAGGGGCTTTGCTTCTCGTCGCCCTTGCTACCCTCTCCA
TCTCTTTGTCTAGCGCCTTTGTCCTCCAGCCCCTTAAACACTCCCAGGGA
CATCAGCATTCGTCATCACCCCGCAGCAGGGGCAGCGTCAGCACGAGCAG
CAGGAGCAGCAGTTGCATCGCCGCCCTCAAGGAAACCAAAGGGTCAGAGC
CAGAGACCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCAGACTCGCCAGTCTCCCGCCAAAGATTCTTTGAAGGCTT
TATTTCGGCCGCTGGGGGTATGCTGGCCATCAGCACTGCCTCGTCTCCGC
TACCCAGCTGGGCCCGTCCAGAGGGTGTCAATAGACCAGAGCTTCTTCCC
AAGGAACCCACCAACGTTATCGACCTCGAGCGCTTCTTAACATCTGGGCA
AAAGAAACGGTTGAACGCACAATTGGAATCTTTGGAAAAAGACACGGGCA
TCAAGGTCCGACTGTTGTGTCAACGGTATCCCGACACTCCCGGTCTCGCC
ATCAAGGACTTCTGGAAGCTTGACGACAAGAGCATTGTCATGGTCGTAGA
TAAGGGCCCGGCTAATATCAAGCAAGTGGCGACCAGGAATCTGATGAACT
TCAATGTCGGCAGCGGGCTGCAGTTGTTGTTACCGCCGGCCTTTTGGAAC
CGTGTCCGCTCTCGGTTTGGCTCCATCTTCTACTTGCGCAGCCACGGGGA
TGACGAGGCCATCATCGCGACCATCAACACGATCGATACTTGCATTCGTC
TAAAGGGTTGTGTGGACGTGCCCCAGGGGGTGGATGAGGAGGAGGGTGTG
TTTAGTTTCTTAAAGTAAGGGGGCGAGGAATGCAGCTTAAAACGCAAAAA
ATAGATTGAAAAACGAGGTGATTTAAGCATTTTAGAGCAGTGAAGAACGA
GGGGAAGTCAGGGTGGAAAGGGGTGCAAAGGAGGGGAAGAGGAAGAGGAG
AAAGAAGCGGA back to topprotein sequence of jgi.p|Nanoce1779_2|176109 >mRNA_7907-protein ID=mRNA_7907-protein|Name=jgi.p|Nanoce1779_2|176109|organism=Nannochloropsis oceanica|type=polypeptide|length=295bp
MVRPRAGPSAGALLLVALATLSISLSSAFVLQPLKHSQGHQHSSSPRSRG
SVSTSSRSSSCIAALKETKGSEPETSSSSSSSSSSSSSSSSSSDSPVSRQ
RFFEGFISAAGGMLAISTASSPLPSWARPEGVNRPELLPKEPTNVIDLER
FLTSGQKKRLNAQLESLEKDTGIKVRLLCQRYPDTPGLAIKDFWKLDDKS
IVMVVDKGPANIKQVATRNLMNFNVGSGLQLLLPPAFWNRVRSRFGSIFY
LRSHGDDEAIIATINTIDTCIRLKGCVDVPQGVDEEEGVFSFLK* back to topmRNA from alignment at scaffold_22:137430..139434- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7907 ID=mRNA_7907|Name=jgi.p|Nanoce1779_2|176109|organism=Nannochloropsis oceanica|type=mRNA|length=2005bp|location=Sequence derived from alignment at scaffold_22:137430..139434- (Nannochloropsis oceanica)
TCCGTTGAACGGCAGTGTAGCCGCTGACTCCCCATCCCTACCTCTCCCAT
CCCCAACCCACCAACTACAACAGCACCACCGACATGGTTCGACCCCGCGC
CGGCCCTTCAGCAGGGGCTTTGCTTCTCGTCGCCCTTGCTACCCTCTCCA
TCTCTTTGTCTAGCGCCTTTGTCCTCCAGCCCCTTAAACACTCCCAGGGA
CATCAGCATTCGTCATCACCCCGCAGCAGGGGCAGCGTCAGCACGAGCAG
CAGGAGCAGCAGTTGCATCGCCGCCCTCAAGGAAACCAAAGGGTCAGAGC
CAGAGACCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCAGACTCGCCAGTCTCCCGCCAAAGATTCTTTGAAGGCTT
TATTTCGGCCGCTGGGGGTACGTGAGTGTGCACCACATGACTAAAGTCAT
GAAGGCTAACGAGGAAAATTTATGTCCCATTATCATTTTTTTTGCGCCTT
CTCTTTCTAATCTCCTTCCATTTCCCTGCCACCAACCTCTTCCCTTCATT
CCTACACCTCAACACACGTTTCCAGGTATGCTGGCCATCAGCACTGCCTC
GTCTCCGCTACCCAGCTGGGCCCGTCCAGAGGGTGTCAATAGACCAGTGA
GTACCTATACTCTGAGAGGGAAGGTCTACATGTGTGCATGTGTCTCTGTT
TGTCTGTGTTCCTATGTCTTCGTCTGCGTCCGTGTATGTATGTTCGTCTC
TGTGTCCGTTTATCTCTATGTCTGAATGTGTTTGTGTGATGATCTTTGTG
AGTATTTTCCAGGATGTTTGTCGTGCACGCGAAATGGTTCGAAACGCGGC
GCGACTTTTTTTCTTGCTCTACCTCAAACAGCTATAATTTCCTCCCTCCC
CCTTCTATCCCCCTCCGCTTTCCACTACAGGAGCTTCTTCCCAAGGAACC
CACCAACGTTATCGACCTCGAGCGCTTCTTAACATCTGGGCAAAAGAAAC
GGTTGAACGCACAATTGGAATCTTTGGAAAAAGACACGGGCATCAAGGTC
CGACTGTTGTGTCAACGGTGAGTTTACCTGTGCTTTCTTCCCTCATTCCC
CTCCATCCCCCTTTTTGTTATGTTTATTTATTTCTTTGTTTTTTTTCTTC
TTTTTTAAACTCAACATTGTGAAATTCTAAACCTCCCTCCCTTCCTCCCT
TCCTTCCTTCCGTCCTTTATTGCGTAGGTATCCCGACACTCCCGGTCTCG
CCATCAAGGACTTCTGGAAGCTTGACGACAAGAGCATTGTCATGGTCGTA
GATAAGGGCCCGGCTAATATCAAGCAAGTGGCGACCAGGAATCTGATGAA
CTTCAATGTCGGCAGCGGGCTGCAGTTGTTGTTACCGCCGGGTAAGAAAG
GAGGGAGGGAGGGAGGGGGGGAGGGAGGGAGAGGTGATTATTGATGTGTT
TGTCTATGTATGACTCTTGAAAGTCTTTTTTTTTGTATCCAATATGTGAA
TCCTCTGTATGTTATGAATGGTCATAATGTATGTGTTGTACGGCCGAATC
AACATTGGCACCAGAGCTATCTCTATTGAAAATAGTTCGTTTCACATTTA
TCACCACACGCCATCACTCACACTTCTTTCTTTTCATCCCTCCCTCTCTT
CCCTCCATCGTCCCATACGTCTTTCTCTCCTAGCCTTTTGGAACCGTGTC
CGCTCTCGGTTTGGCTCCATCTTCTACTTGCGCAGCCACGGGGATGACGA
GGCCATCATCGCGACCATCAACACGATCGATACTTGCATTCGTCTAAAGG
GTTGTGTGGACGTGCCCCAGGGGGTGGATGAGGAGGAGGGTGTGTTTAGT
TTCTTAAAGTAAGGGGGCGAGGAATGCAGCTTAAAACGCAAAAAATAGAT
TGAAAAACGAGGTGATTTAAGCATTTTAGAGCAGTGAAGAACGAGGGGAA
GTCAGGGTGGAAAGGGGTGCAAAGGAGGGGAAGAGGAAGAGGAGAAAGAA
GCGGA back to topCoding sequence (CDS) from alignment at scaffold_22:137430..139434- >mRNA_7907 ID=mRNA_7907|Name=jgi.p|Nanoce1779_2|176109|organism=Nannochloropsis oceanica|type=CDS|length=4425bp|location=Sequence derived from alignment at scaffold_22:137430..139434- (Nannochloropsis oceanica)
CCTTTTGGAACCGTGTCCGCTCTCGGTTTGGCTCCATCTTCTACTTGCGC
AGCCACGGGGATGACGAGGCCATCATCGCGACCATCAACACGATCGATAC
TTGCATTCGTCTAAAGGGTTGTGTGGACGTGCCCCAGGGGGTGGATGAGG
AGGAGGGTGTGTTTAGTTTCTTAAAGTAAGTATCCCGACACTCCCGGTCT
CGCCATCAAGGACTTCTGGAAGCTTGACGACAAGAGCATTGTCATGGTCG
TAGATAAGGGCCCGGCTAATATCAAGCAAGTGGCGACCAGGAATCTGATG
AACTTCAATGTCGGCAGCGGGCTGCAGTTGTTGTTACCGCCGGGAGCTTC
TTCCCAAGGAACCCACCAACGTTATCGACCTCGAGCGCTTCTTAACATCT
GGGCAAAAGAAACGGTTGAACGCACAATTGGAATCTTTGGAAAAAGACAC
GGGCATCAAGGTCCGACTGTTGTGTCAACGGTATGCTGGCCATCAGCACT
GCCTCGTCTCCGCTACCCAGCTGGGCCCGTCCAGAGGGTGTCAATAGACC
AATGGTTCGACCCCGCGCCGGCCCTTCAGCAGGGGCTTTGCTTCTCGTCG
CCCTTGCTACCCTCTCCATCTCTTTGTCTAGCGCCTTTGTCCTCCAGCCC
CTTAAACACTCCCAGGGACATCAGCATTCGTCATCACCCCGCAGCAGGGG
CAGCGTCAGCACGAGCAGCAGGAGCAGCAGTTGCATCGCCGCCCTCAAGG
AAACCAAAGGGTCAGAGCCAGAGACCTCCTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCAGACTCGCCAGTCTCCCGCCA
AAGATTCTTTGAAGGCTTTATTTCGGCCGCTGGGGCCTTTTGGAACCGTG
TCCGCTCTCGGTTTGGCTCCATCTTCTACTTGCGCAGCCACGGGGATGAC
GAGGCCATCATCGCGACCATCAACACGATCGATACTTGCATTCGTCTAAA
GGGTTGTGTGGACGTGCCCCAGGGGGTGGATGAGGAGGAGGGTGTGTTTA
GTTTCTTAAAGTAAGTATCCCGACACTCCCGGTCTCGCCATCAAGGACTT
CTGGAAGCTTGACGACAAGAGCATTGTCATGGTCGTAGATAAGGGCCCGG
CTAATATCAAGCAAGTGGCGACCAGGAATCTGATGAACTTCAATGTCGGC
AGCGGGCTGCAGTTGTTGTTACCGCCGGGAGCTTCTTCCCAAGGAACCCA
CCAACGTTATCGACCTCGAGCGCTTCTTAACATCTGGGCAAAAGAAACGG
TTGAACGCACAATTGGAATCTTTGGAAAAAGACACGGGCATCAAGGTCCG
ACTGTTGTGTCAACGGTATGCTGGCCATCAGCACTGCCTCGTCTCCGCTA
CCCAGCTGGGCCCGTCCAGAGGGTGTCAATAGACCAATGGTTCGACCCCG
CGCCGGCCCTTCAGCAGGGGCTTTGCTTCTCGTCGCCCTTGCTACCCTCT
CCATCTCTTTGTCTAGCGCCTTTGTCCTCCAGCCCCTTAAACACTCCCAG
GGACATCAGCATTCGTCATCACCCCGCAGCAGGGGCAGCGTCAGCACGAG
CAGCAGGAGCAGCAGTTGCATCGCCGCCCTCAAGGAAACCAAAGGGTCAG
AGCCAGAGACCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCAGACTCGCCAGTCTCCCGCCAAAGATTCTTTGAAGG
CTTTATTTCGGCCGCTGGGGCCTTTTGGAACCGTGTCCGCTCTCGGTTTG
GCTCCATCTTCTACTTGCGCAGCCACGGGGATGACGAGGCCATCATCGCG
ACCATCAACACGATCGATACTTGCATTCGTCTAAAGGGTTGTGTGGACGT
GCCCCAGGGGGTGGATGAGGAGGAGGGTGTGTTTAGTTTCTTAAAGTAAG
TATCCCGACACTCCCGGTCTCGCCATCAAGGACTTCTGGAAGCTTGACGA
CAAGAGCATTGTCATGGTCGTAGATAAGGGCCCGGCTAATATCAAGCAAG
TGGCGACCAGGAATCTGATGAACTTCAATGTCGGCAGCGGGCTGCAGTTG
TTGTTACCGCCGGGAGCTTCTTCCCAAGGAACCCACCAACGTTATCGACC
TCGAGCGCTTCTTAACATCTGGGCAAAAGAAACGGTTGAACGCACAATTG
GAATCTTTGGAAAAAGACACGGGCATCAAGGTCCGACTGTTGTGTCAACG
GTATGCTGGCCATCAGCACTGCCTCGTCTCCGCTACCCAGCTGGGCCCGT
CCAGAGGGTGTCAATAGACCAATGGTTCGACCCCGCGCCGGCCCTTCAGC
AGGGGCTTTGCTTCTCGTCGCCCTTGCTACCCTCTCCATCTCTTTGTCTA
GCGCCTTTGTCCTCCAGCCCCTTAAACACTCCCAGGGACATCAGCATTCG
TCATCACCCCGCAGCAGGGGCAGCGTCAGCACGAGCAGCAGGAGCAGCAG
TTGCATCGCCGCCCTCAAGGAAACCAAAGGGTCAGAGCCAGAGACCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCA
GACTCGCCAGTCTCCCGCCAAAGATTCTTTGAAGGCTTTATTTCGGCCGC
TGGGGCCTTTTGGAACCGTGTCCGCTCTCGGTTTGGCTCCATCTTCTACT
TGCGCAGCCACGGGGATGACGAGGCCATCATCGCGACCATCAACACGATC
GATACTTGCATTCGTCTAAAGGGTTGTGTGGACGTGCCCCAGGGGGTGGA
TGAGGAGGAGGGTGTGTTTAGTTTCTTAAAGTAAGTATCCCGACACTCCC
GGTCTCGCCATCAAGGACTTCTGGAAGCTTGACGACAAGAGCATTGTCAT
GGTCGTAGATAAGGGCCCGGCTAATATCAAGCAAGTGGCGACCAGGAATC
TGATGAACTTCAATGTCGGCAGCGGGCTGCAGTTGTTGTTACCGCCGGGA
GCTTCTTCCCAAGGAACCCACCAACGTTATCGACCTCGAGCGCTTCTTAA
CATCTGGGCAAAAGAAACGGTTGAACGCACAATTGGAATCTTTGGAAAAA
GACACGGGCATCAAGGTCCGACTGTTGTGTCAACGGTATGCTGGCCATCA
GCACTGCCTCGTCTCCGCTACCCAGCTGGGCCCGTCCAGAGGGTGTCAAT
AGACCAATGGTTCGACCCCGCGCCGGCCCTTCAGCAGGGGCTTTGCTTCT
CGTCGCCCTTGCTACCCTCTCCATCTCTTTGTCTAGCGCCTTTGTCCTCC
AGCCCCTTAAACACTCCCAGGGACATCAGCATTCGTCATCACCCCGCAGC
AGGGGCAGCGTCAGCACGAGCAGCAGGAGCAGCAGTTGCATCGCCGCCCT
CAAGGAAACCAAAGGGTCAGAGCCAGAGACCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCAGACTCGCCAGTCTCC
CGCCAAAGATTCTTTGAAGGCTTTATTTCGGCCGCTGGGGCCTTTTGGAA
CCGTGTCCGCTCTCGGTTTGGCTCCATCTTCTACTTGCGCAGCCACGGGG
ATGACGAGGCCATCATCGCGACCATCAACACGATCGATACTTGCATTCGT
CTAAAGGGTTGTGTGGACGTGCCCCAGGGGGTGGATGAGGAGGAGGGTGT
GTTTAGTTTCTTAAAGTAAGTATCCCGACACTCCCGGTCTCGCCATCAAG
GACTTCTGGAAGCTTGACGACAAGAGCATTGTCATGGTCGTAGATAAGGG
CCCGGCTAATATCAAGCAAGTGGCGACCAGGAATCTGATGAACTTCAATG
TCGGCAGCGGGCTGCAGTTGTTGTTACCGCCGGGAGCTTCTTCCCAAGGA
ACCCACCAACGTTATCGACCTCGAGCGCTTCTTAACATCTGGGCAAAAGA
AACGGTTGAACGCACAATTGGAATCTTTGGAAAAAGACACGGGCATCAAG
GTCCGACTGTTGTGTCAACGGTATGCTGGCCATCAGCACTGCCTCGTCTC
CGCTACCCAGCTGGGCCCGTCCAGAGGGTGTCAATAGACCAATGGTTCGA
CCCCGCGCCGGCCCTTCAGCAGGGGCTTTGCTTCTCGTCGCCCTTGCTAC
CCTCTCCATCTCTTTGTCTAGCGCCTTTGTCCTCCAGCCCCTTAAACACT
CCCAGGGACATCAGCATTCGTCATCACCCCGCAGCAGGGGCAGCGTCAGC
ACGAGCAGCAGGAGCAGCAGTTGCATCGCCGCCCTCAAGGAAACCAAAGG
GTCAGAGCCAGAGACCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCAGACTCGCCAGTCTCCCGCCAAAGATTCTTT
GAAGGCTTTATTTCGGCCGCTGGGG back to top
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