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Properties
| Property Name | Value |
|---|
| TranscriptId | 175524 |
| Track | FilteredModels2 |
| ProteinId | 175438 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_22 | supercontig | scaffold_22:125133..127290 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7903 ID=mRNA_7903|Name=jgi.p|Nanoce1779_2|175438|organism=Nannochloropsis oceanica|type=mRNA|length=1562bp
CCTGAGGGTGGGCCGGTCCTCCATCTTTCAACCTGTGAAGTGTTAGAAGA
GAATTGGGAGGCGAGGGATTGAGGGGCGTCCCGGCGGGTCGACCCAGGGT
GGCCGGTGCGGGTGCAGGATGAGATGTTGAGAAATGGTACCACTAGTACT
TAATTAAATAGAAATCATAAATAAATATTTAAGTGTAGCTTCTATTTACG
GGTGAACCACCCCCCATCATGATGGGGATCATGAGGAAAGAATGGGTACT
CTCGCCATCCCACCGTGCCCCCACCCCCACCCACAATGTGCATGACTCTC
ACCTGCCCACGCAGCCGTGTCGCCACGACGACAATGGCATAGTCTACATG
ATTACCTTGCAGCTCTTTATCAAATCTCTCCTTTCCCTTCTCTATTTAAA
CATTCAGAACGCTCAGATCTGCCCATCCAAGTACAACCCCCCTGCCCATA
CCAGCAGCACCACCACGATGTTCCTGTTTGGCGGCAGCGGCAAGGAGGTG
TCGTCGTCTGAGGAGCCGCAGCAGCAAAGACAGCAGCAGCAGCAGCAAAG
ACTGCAACGACAGACTTCGCCGTTGCGCTGTGGGCAAACCCAACAGACCG
CCGAGGAGCAGAAATCGCAGGCGGAGAAGGAGGCGCATTCGAAGGCGCTT
TTGTTGATGAACGCCGAGCAGCGAGGCTTCTTGTCGTACGAGGAACACGA
ATATCACAGGCACCTCAACGAACTCGACACTGCCTTGTCCGCCGCCGTCC
CGCAAGCCGGGCAGCCCTATCACACCCACGACCTCTCCTGGAAGAGCAGT
GGCACTCCTGTCCGTTATTTGTTCAAATTACCCGTCCCTGTTGACACCGC
CGGTACCCACGTCACCTACCGTTTCGCGTCTGATGAATTCGACATCAGCT
TTGCCGTATTTTTCTTAGGGGTCGAAGAGGATGCCAAGATGGAAATCGTC
CTCCCCGCGGCTAGGGTGAACTCCCACCAGGAGCCTGTCAGTGGGGACAT
AACGGTGCACCGTCCGGGCACGGTCATCTTGCTCTGGGACAACACGTACA
GTTGGTTTGCCACAAAGGCTCTCTCTTACAGCGTCCACTTGCGATACCCC
ACCGGCCCGACGGCTGAGAGGGAACGAGGTTCAAGGGCAAGAGCAATAGT
AGCAGCAGCAGAGAAGGACATTCAGAAAGCAGAGGAGAAGAAGAGGGTGG
TGCAGGAGGAGGCACAGACTCTGACGAGCGAGGTCGCTCAACTAGAGCAG
CAACTCGCCCTCCTTCAAACAACGCTGAGTGACAAAAAACACGAGCTCAG
CACCCTCCACGAAGATGCCTTGATGCTGCATGAGTGCGTCCACTCCCGCC
GGACCCACCTCCTCCCCCTCCTCCTCCGCGCCCTGCCTGCCTCGGTCCTC
CTCCACCTCGCAAGTTTCTTCAGCTCCAATGATCAGATCCAGGTACAAGG
AGGGGGGGACAAAGGATACGAGGGCAGGAAGGAAAGAAAGGAAAGGAAGG
AATATTGAAGGACTATTGAACGCGGCGGGAGACAAGTAATCCTTCATTCT
CTCCCTCCCTCC back to topprotein sequence of jgi.p|Nanoce1779_2|175438 >mRNA_7903-protein ID=mRNA_7903-protein|Name=jgi.p|Nanoce1779_2|175438|organism=Nannochloropsis oceanica|type=polypeptide|length=430bp
MMGIMRKEWVLSPSHRAPTPTHNVHDSHLPTQPCRHDDNGIVYMITLQLF
IKSLLSLLYLNIQNAQICPSKYNPPAHTSSTTTMFLFGGSGKEVSSSEEP
QQQRQQQQQQRLQRQTSPLRCGQTQQTAEEQKSQAEKEAHSKALLLMNAE
QRGFLSYEEHEYHRHLNELDTALSAAVPQAGQPYHTHDLSWKSSGTPVRY
LFKLPVPVDTAGTHVTYRFASDEFDISFAVFFLGVEEDAKMEIVLPAARV
NSHQEPVSGDITVHRPGTVILLWDNTYSWFATKALSYSVHLRYPTGPTAE
RERGSRARAIVAAAEKDIQKAEEKKRVVQEEAQTLTSEVAQLEQQLALLQ
TTLSDKKHELSTLHEDALMLHECVHSRRTHLLPLLLRALPASVLLHLASF
FSSNDQIQVQGGGDKGYEGRKERKERKEY* back to topmRNA from alignment at scaffold_22:125133..127290- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7903 ID=mRNA_7903|Name=jgi.p|Nanoce1779_2|175438|organism=Nannochloropsis oceanica|type=mRNA|length=2158bp|location=Sequence derived from alignment at scaffold_22:125133..127290- (Nannochloropsis oceanica)
CCTGAGGGTGGGCCGGTCCTCCATCTTTCAACCTGTGAAGTGTTAGAAGA
GAATTGGGAGGCGAGGGATTGAGGGGCGTCCCGGCGGGTCGACCCAGGGT
GGCCGGTGCGGGTGCAGGATGAGATGTTGAGAAATGGTACCACTAGTACT
TAATTAAATAGAAATCATAAATAAATATTTAAGTGTAGCTTCTATTTACG
GGTGAACCACCCCCCATCATGATGGGGATCATGAGGAAAGAATGGGTACT
CTCGCCATCCCACCGTGCCCCCACCCCCACCCACAATGTGCATGACTCTC
ACCTGCCCACGCAGCCGTGTCGCCACGACGACAATGGCATAGTCTACATG
ATTACCTTGCAGCTCTTTATCAAATCTCTCCTTTCCCTTCTCTATTTAAA
CATTCAGAACGCTCAGATCTGCCCATCCAAGTACAACCCCCCTGCCCATA
CCAGCAGCACCACCACGATGTTCCTGTTTGGCGGCAGCGGCAAGGAGGTG
TCGTCGTCTGAGGAGCCGCAGCAGCAAAGACAGCAGCAGCAGCAGCAAAG
ACTGCAACGACAGACTTCGCCGTTGCGCTGTGGGCAAACCCAACAGACCG
CCGAGGAGCAGAAATCGCAGGCGGAGAAGGAGGCGCATTCGAAGGCGCTT
TTGTTGATGAACGCCGAGCAGCGAGGCTTCTTGTCGTACGAGGTATGTGT
GTGCATGTATGCGGGCACTTCCTCGTGTGAGCTGCATGATGATCCTTGTC
TATGATCCGATCGCTCCCATCTGATGCTACAAACCCGTCTTCATCCACTC
CCTCCCCTCCCTCCCTCCCTCCCTCCACATCTGACAGGAACACGAATATC
ACAGGCACCTCAACGAACTCGACACTGCCTTGTCCGCCGCCGTCCCGCAA
GCCGGGCAGCCCTATCACACCCACGACCTCTCCTGGAAGAGCAGTGGCAC
TCCTGTCCGTTATTTGTTCAAATTACCCGTCCCTGTTGACACCGCCGGTA
CCCACGTCACCTACCGTTTCGCGTCTGATGAATTCGACATCAGCTTTGCC
GTATTTTTCTTAGGGGTCGAAGAGGATGCCAAGATGGAAATCGTCCTCCC
CGCGGCTAGGGTGAACTCCCACCAGGAGCCTGTCAGTGGGGACATAACGG
TGCACCGTCCGGGCACGGTCATCTTGCTCTGGGACAACACGTACAGGTAT
GCCCTTGCCCTCCTTCCCTCTCTTCCTTTCTTCCTTTCCCCCTTCCCTCG
TTTCCCGTGTCTGGTACGTCGTTGCCCTCCCTCCCTTCCTCCCCCCTGCC
TGCTTTCTCGCCAAGGGGCTATTTTTTATTTAGTAGCCTACCGGATCAAC
AGTAGCAGCAGCAGCAGTAGTAGTAGTTGTTGTTATTGTTGCTTTTGCTG
TTGATGTTGATGTTGTTATTGTTGTTGTAATTGTTGTTGTGGTGGTGGTG
GTAGTGGTAATATAAAAAGCAAATTACCTCACATTACCCTCCCTCCCTCC
CTCCCTCCCTCCCCAGTTGGTTTGCCACAAAGGCTCTCTCTTACAGCGTC
CACTTGCGATACCCCACCGGCCCGACGGCTGAGAGGGAACGAGGTTCAAG
GGCAAGAGCAATAGTAGCAGCAGCAGAGAAGGACATTCAGAAAGCAGAGG
AGAAGAAGAGGGTGGTGCAGGAGGAGGCACAGACTCTGACGAGGTAGGGA
AGGGAGGAAGGAGGGAGAAAGGGAAGGAGGACAGGTGGCGAGACACAATG
CTCAAAGACGAATAAGTTAACATTTGTTTATTCTTCCCTTCTTCCCCTTC
CCTCCCTCCCTCCCTCCCCTCAAGCGAGGTCGCTCAACTAGAGCAGCAAC
TCGCCCTCCTTCAAACAACGCTGAGTGACAAAAAACACGAGCTCAGCACC
CTCCACGAAGATGCCTTGATGCTGCATGAGTGCGTCCACTCCCGCCGGAC
CCACCTCCTCCCCCTCCTCCTCCGCGCCCTGCCTGCCTCGGTCCTCCTCC
ACCTCGCAAGTTTCTTCAGCTCCAATGATCAGATCCAGGTACAAGGAGGG
GGGGACAAAGGATACGAGGGCAGGAAGGAAAGAAAGGAAAGGAAGGAATA
TTGAAGGACTATTGAACGCGGCGGGAGACAAGTAATCCTTCATTCTCTCC
CTCCCTCC back to topCoding sequence (CDS) from alignment at scaffold_22:125133..127290- >mRNA_7903 ID=mRNA_7903|Name=jgi.p|Nanoce1779_2|175438|organism=Nannochloropsis oceanica|type=CDS|length=5160bp|location=Sequence derived from alignment at scaffold_22:125133..127290- (Nannochloropsis oceanica)
CGAGGTCGCTCAACTAGAGCAGCAACTCGCCCTCCTTCAAACAACGCTGA
GTGACAAAAAACACGAGCTCAGCACCCTCCACGAAGATGCCTTGATGCTG
CATGAGTGCGTCCACTCCCGCCGGACCCACCTCCTCCCCCTCCTCCTCCG
CGCCCTGCCTGCCTCGGTCCTCCTCCACCTCGCAAGTTTCTTCAGCTCCA
ATGATCAGATCCAGGTACAAGGAGGGGGGGACAAAGGATACGAGGGCAGG
AAGGAAAGAAAGGAAAGGAAGGAATATTGATTGGTTTGCCACAAAGGCTC
TCTCTTACAGCGTCCACTTGCGATACCCCACCGGCCCGACGGCTGAGAGG
GAACGAGGTTCAAGGGCAAGAGCAATAGTAGCAGCAGCAGAGAAGGACAT
TCAGAAAGCAGAGGAGAAGAAGAGGGTGGTGCAGGAGGAGGCACAGACTC
TGACGAGGAACACGAATATCACAGGCACCTCAACGAACTCGACACTGCCT
TGTCCGCCGCCGTCCCGCAAGCCGGGCAGCCCTATCACACCCACGACCTC
TCCTGGAAGAGCAGTGGCACTCCTGTCCGTTATTTGTTCAAATTACCCGT
CCCTGTTGACACCGCCGGTACCCACGTCACCTACCGTTTCGCGTCTGATG
AATTCGACATCAGCTTTGCCGTATTTTTCTTAGGGGTCGAAGAGGATGCC
AAGATGGAAATCGTCCTCCCCGCGGCTAGGGTGAACTCCCACCAGGAGCC
TGTCAGTGGGGACATAACGGTGCACCGTCCGGGCACGGTCATCTTGCTCT
GGGACAACACGTACAGATGATGGGGATCATGAGGAAAGAATGGGTACTCT
CGCCATCCCACCGTGCCCCCACCCCCACCCACAATGTGCATGACTCTCAC
CTGCCCACGCAGCCGTGTCGCCACGACGACAATGGCATAGTCTACATGAT
TACCTTGCAGCTCTTTATCAAATCTCTCCTTTCCCTTCTCTATTTAAACA
TTCAGAACGCTCAGATCTGCCCATCCAAGTACAACCCCCCTGCCCATACC
AGCAGCACCACCACGATGTTCCTGTTTGGCGGCAGCGGCAAGGAGGTGTC
GTCGTCTGAGGAGCCGCAGCAGCAAAGACAGCAGCAGCAGCAGCAAAGAC
TGCAACGACAGACTTCGCCGTTGCGCTGTGGGCAAACCCAACAGACCGCC
GAGGAGCAGAAATCGCAGGCGGAGAAGGAGGCGCATTCGAAGGCGCTTTT
GTTGATGAACGCCGAGCAGCGAGGCTTCTTGTCGTACGAGCGAGGTCGCT
CAACTAGAGCAGCAACTCGCCCTCCTTCAAACAACGCTGAGTGACAAAAA
ACACGAGCTCAGCACCCTCCACGAAGATGCCTTGATGCTGCATGAGTGCG
TCCACTCCCGCCGGACCCACCTCCTCCCCCTCCTCCTCCGCGCCCTGCCT
GCCTCGGTCCTCCTCCACCTCGCAAGTTTCTTCAGCTCCAATGATCAGAT
CCAGGTACAAGGAGGGGGGGACAAAGGATACGAGGGCAGGAAGGAAAGAA
AGGAAAGGAAGGAATATTGATTGGTTTGCCACAAAGGCTCTCTCTTACAG
CGTCCACTTGCGATACCCCACCGGCCCGACGGCTGAGAGGGAACGAGGTT
CAAGGGCAAGAGCAATAGTAGCAGCAGCAGAGAAGGACATTCAGAAAGCA
GAGGAGAAGAAGAGGGTGGTGCAGGAGGAGGCACAGACTCTGACGAGGAA
CACGAATATCACAGGCACCTCAACGAACTCGACACTGCCTTGTCCGCCGC
CGTCCCGCAAGCCGGGCAGCCCTATCACACCCACGACCTCTCCTGGAAGA
GCAGTGGCACTCCTGTCCGTTATTTGTTCAAATTACCCGTCCCTGTTGAC
ACCGCCGGTACCCACGTCACCTACCGTTTCGCGTCTGATGAATTCGACAT
CAGCTTTGCCGTATTTTTCTTAGGGGTCGAAGAGGATGCCAAGATGGAAA
TCGTCCTCCCCGCGGCTAGGGTGAACTCCCACCAGGAGCCTGTCAGTGGG
GACATAACGGTGCACCGTCCGGGCACGGTCATCTTGCTCTGGGACAACAC
GTACAGATGATGGGGATCATGAGGAAAGAATGGGTACTCTCGCCATCCCA
CCGTGCCCCCACCCCCACCCACAATGTGCATGACTCTCACCTGCCCACGC
AGCCGTGTCGCCACGACGACAATGGCATAGTCTACATGATTACCTTGCAG
CTCTTTATCAAATCTCTCCTTTCCCTTCTCTATTTAAACATTCAGAACGC
TCAGATCTGCCCATCCAAGTACAACCCCCCTGCCCATACCAGCAGCACCA
CCACGATGTTCCTGTTTGGCGGCAGCGGCAAGGAGGTGTCGTCGTCTGAG
GAGCCGCAGCAGCAAAGACAGCAGCAGCAGCAGCAAAGACTGCAACGACA
GACTTCGCCGTTGCGCTGTGGGCAAACCCAACAGACCGCCGAGGAGCAGA
AATCGCAGGCGGAGAAGGAGGCGCATTCGAAGGCGCTTTTGTTGATGAAC
GCCGAGCAGCGAGGCTTCTTGTCGTACGAGCGAGGTCGCTCAACTAGAGC
AGCAACTCGCCCTCCTTCAAACAACGCTGAGTGACAAAAAACACGAGCTC
AGCACCCTCCACGAAGATGCCTTGATGCTGCATGAGTGCGTCCACTCCCG
CCGGACCCACCTCCTCCCCCTCCTCCTCCGCGCCCTGCCTGCCTCGGTCC
TCCTCCACCTCGCAAGTTTCTTCAGCTCCAATGATCAGATCCAGGTACAA
GGAGGGGGGGACAAAGGATACGAGGGCAGGAAGGAAAGAAAGGAAAGGAA
GGAATATTGATTGGTTTGCCACAAAGGCTCTCTCTTACAGCGTCCACTTG
CGATACCCCACCGGCCCGACGGCTGAGAGGGAACGAGGTTCAAGGGCAAG
AGCAATAGTAGCAGCAGCAGAGAAGGACATTCAGAAAGCAGAGGAGAAGA
AGAGGGTGGTGCAGGAGGAGGCACAGACTCTGACGAGGAACACGAATATC
ACAGGCACCTCAACGAACTCGACACTGCCTTGTCCGCCGCCGTCCCGCAA
GCCGGGCAGCCCTATCACACCCACGACCTCTCCTGGAAGAGCAGTGGCAC
TCCTGTCCGTTATTTGTTCAAATTACCCGTCCCTGTTGACACCGCCGGTA
CCCACGTCACCTACCGTTTCGCGTCTGATGAATTCGACATCAGCTTTGCC
GTATTTTTCTTAGGGGTCGAAGAGGATGCCAAGATGGAAATCGTCCTCCC
CGCGGCTAGGGTGAACTCCCACCAGGAGCCTGTCAGTGGGGACATAACGG
TGCACCGTCCGGGCACGGTCATCTTGCTCTGGGACAACACGTACAGATGA
TGGGGATCATGAGGAAAGAATGGGTACTCTCGCCATCCCACCGTGCCCCC
ACCCCCACCCACAATGTGCATGACTCTCACCTGCCCACGCAGCCGTGTCG
CCACGACGACAATGGCATAGTCTACATGATTACCTTGCAGCTCTTTATCA
AATCTCTCCTTTCCCTTCTCTATTTAAACATTCAGAACGCTCAGATCTGC
CCATCCAAGTACAACCCCCCTGCCCATACCAGCAGCACCACCACGATGTT
CCTGTTTGGCGGCAGCGGCAAGGAGGTGTCGTCGTCTGAGGAGCCGCAGC
AGCAAAGACAGCAGCAGCAGCAGCAAAGACTGCAACGACAGACTTCGCCG
TTGCGCTGTGGGCAAACCCAACAGACCGCCGAGGAGCAGAAATCGCAGGC
GGAGAAGGAGGCGCATTCGAAGGCGCTTTTGTTGATGAACGCCGAGCAGC
GAGGCTTCTTGTCGTACGAGCGAGGTCGCTCAACTAGAGCAGCAACTCGC
CCTCCTTCAAACAACGCTGAGTGACAAAAAACACGAGCTCAGCACCCTCC
ACGAAGATGCCTTGATGCTGCATGAGTGCGTCCACTCCCGCCGGACCCAC
CTCCTCCCCCTCCTCCTCCGCGCCCTGCCTGCCTCGGTCCTCCTCCACCT
CGCAAGTTTCTTCAGCTCCAATGATCAGATCCAGGTACAAGGAGGGGGGG
ACAAAGGATACGAGGGCAGGAAGGAAAGAAAGGAAAGGAAGGAATATTGA
TTGGTTTGCCACAAAGGCTCTCTCTTACAGCGTCCACTTGCGATACCCCA
CCGGCCCGACGGCTGAGAGGGAACGAGGTTCAAGGGCAAGAGCAATAGTA
GCAGCAGCAGAGAAGGACATTCAGAAAGCAGAGGAGAAGAAGAGGGTGGT
GCAGGAGGAGGCACAGACTCTGACGAGGAACACGAATATCACAGGCACCT
CAACGAACTCGACACTGCCTTGTCCGCCGCCGTCCCGCAAGCCGGGCAGC
CCTATCACACCCACGACCTCTCCTGGAAGAGCAGTGGCACTCCTGTCCGT
TATTTGTTCAAATTACCCGTCCCTGTTGACACCGCCGGTACCCACGTCAC
CTACCGTTTCGCGTCTGATGAATTCGACATCAGCTTTGCCGTATTTTTCT
TAGGGGTCGAAGAGGATGCCAAGATGGAAATCGTCCTCCCCGCGGCTAGG
GTGAACTCCCACCAGGAGCCTGTCAGTGGGGACATAACGGTGCACCGTCC
GGGCACGGTCATCTTGCTCTGGGACAACACGTACAGATGATGGGGATCAT
GAGGAAAGAATGGGTACTCTCGCCATCCCACCGTGCCCCCACCCCCACCC
ACAATGTGCATGACTCTCACCTGCCCACGCAGCCGTGTCGCCACGACGAC
AATGGCATAGTCTACATGATTACCTTGCAGCTCTTTATCAAATCTCTCCT
TTCCCTTCTCTATTTAAACATTCAGAACGCTCAGATCTGCCCATCCAAGT
ACAACCCCCCTGCCCATACCAGCAGCACCACCACGATGTTCCTGTTTGGC
GGCAGCGGCAAGGAGGTGTCGTCGTCTGAGGAGCCGCAGCAGCAAAGACA
GCAGCAGCAGCAGCAAAGACTGCAACGACAGACTTCGCCGTTGCGCTGTG
GGCAAACCCAACAGACCGCCGAGGAGCAGAAATCGCAGGCGGAGAAGGAG
GCGCATTCGAAGGCGCTTTTGTTGATGAACGCCGAGCAGCGAGGCTTCTT
GTCGTACGAG back to top
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