jgi.p|Nanoce1779_2|641491, mRNA_7898 (mRNA) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|641491
Unique NamemRNA_7898
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length438
Alignment locationscaffold_22:115652..116089 -

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Properties
Property NameValue
TranscriptId641577
TrackFilteredModels2
ProteinId641491
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_22supercontigscaffold_22:115652..116089 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|641491gene_7898Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS_7898CDS_7898Nannochloropsis oceanica (N. oceanica CCMP1779)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|641491mRNA_7898-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>mRNA_7898 ID=mRNA_7898|Name=jgi.p|Nanoce1779_2|641491|organism=Nannochloropsis oceanica|type=mRNA|length=438bp
ATGCGCTCCGCGTCGGCCAAGTTGGTGGAGGAAGGGGTTGAGGCCGAGAC
TGAGGACGAGGATAAGGAAGGGGGAGGGGACGAGGTGGGAGTGGAAAGGA
TTGTGACCAGAATATTGATTACCACTGGGTCTACAGCCGCGCGAGCCGGG
CGGAAAGGATCCATGGCCATAGAGGGGGGGGGGGAGGATGAGGACGCATG
GGAGGAAGAGGAAGAAGAGGAAGAGGGGGTGGCATGGGCGGAGTGGGAAA
GTGGTGATGGTGGTGAGGAAGGGGAGGGTGGTGATGGAACTTGTTCATCA
GCTCGAGAGGATGTGGCCACGGCGGTTAGTGAGGAGCTGCTGCTCCTGTT
GATGGTGGATGTGGTGGAGGTGGAGGGAGGGCTAGCGACGACGGTGGAGG
ATGACATGAGAGGTCTTCTTTCCCCTCTTCTTGATTGA
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protein sequence of jgi.p|Nanoce1779_2|641491

>mRNA_7898-protein ID=mRNA_7898-protein|Name=jgi.p|Nanoce1779_2|641491|organism=Nannochloropsis oceanica|type=polypeptide|length=146bp
MRSASAKLVEEGVEAETEDEDKEGGGDEVGVERIVTRILITTGSTAARAG
RKGSMAIEGGGEDEDAWEEEEEEEEGVAWAEWESGDGGEEGEGGDGTCSS
AREDVATAVSEELLLLLMVDVVEVEGGLATTVEDDMRGLLSPLLD*
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mRNA from alignment at scaffold_22:115652..116089-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7898 ID=mRNA_7898|Name=jgi.p|Nanoce1779_2|641491|organism=Nannochloropsis oceanica|type=mRNA|length=438bp|location=Sequence derived from alignment at scaffold_22:115652..116089- (Nannochloropsis oceanica)
ATGCGCTCCGCGTCGGCCAAGTTGGTGGAGGAAGGGGTTGAGGCCGAGAC
TGAGGACGAGGATAAGGAAGGGGGAGGGGACGAGGTGGGAGTGGAAAGGA
TTGTGACCAGAATATTGATTACCACTGGGTCTACAGCCGCGCGAGCCGGG
CGGAAAGGATCCATGGCCATAGAGGGGGGGGGGGAGGATGAGGACGCATG
GGAGGAAGAGGAAGAAGAGGAAGAGGGGGTGGCATGGGCGGAGTGGGAAA
GTGGTGATGGTGGTGAGGAAGGGGAGGGTGGTGATGGAACTTGTTCATCA
GCTCGAGAGGATGTGGCCACGGCGGTTAGTGAGGAGCTGCTGCTCCTGTT
GATGGTGGATGTGGTGGAGGTGGAGGGAGGGCTAGCGACGACGGTGGAGG
ATGACATGAGAGGTCTTCTTTCCCCTCTTCTTGATTGA
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Coding sequence (CDS) from alignment at scaffold_22:115652..116089-

>mRNA_7898 ID=mRNA_7898|Name=jgi.p|Nanoce1779_2|641491|organism=Nannochloropsis oceanica|type=CDS|length=438bp|location=Sequence derived from alignment at scaffold_22:115652..116089- (Nannochloropsis oceanica)
ATGCGCTCCGCGTCGGCCAAGTTGGTGGAGGAAGGGGTTGAGGCCGAGAC
TGAGGACGAGGATAAGGAAGGGGGAGGGGACGAGGTGGGAGTGGAAAGGA
TTGTGACCAGAATATTGATTACCACTGGGTCTACAGCCGCGCGAGCCGGG
CGGAAAGGATCCATGGCCATAGAGGGGGGGGGGGAGGATGAGGACGCATG
GGAGGAAGAGGAAGAAGAGGAAGAGGGGGTGGCATGGGCGGAGTGGGAAA
GTGGTGATGGTGGTGAGGAAGGGGAGGGTGGTGATGGAACTTGTTCATCA
GCTCGAGAGGATGTGGCCACGGCGGTTAGTGAGGAGCTGCTGCTCCTGTT
GATGGTGGATGTGGTGGAGGTGGAGGGAGGGCTAGCGACGACGGTGGAGG
ATGACATGAGAGGTCTTCTTTCCCCTCTTCTTGATTGA
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Synonyms
Publications