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Properties
| Property Name | Value |
|---|
| TranscriptId | 600514 |
| Track | FilteredModels2 |
| ProteinId | 600428 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_22 | supercontig | scaffold_22:109015..110046 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7894 ID=mRNA_7894|Name=jgi.p|Nanoce1779_2|600428|organism=Nannochloropsis oceanica|type=mRNA|length=760bp
CCCCCAGCCGCCCCTTGAGAATGCTGTGGTAGCGGAGGAGGGGGGGGGGG
GAGGAGGAGGAGGGAGAGGAAGATTTCTTCCTGATGGATGTAGAGGAGGA
CGACCAGGAGGACGAGGAAAACGATGCGGATGACGTTGCCATTTTGGCAG
CAGCTGCTCATCATCAATTACATCAACATCACGCCGATCAACCCCCCGTC
CTCCCTCCCGCCCTCAACCACCACCACCACCACCACCACCACCACCAGCA
TCACAATCACAATGTTCACAACCACAACAACAACAACGACAACAACAACA
ACAACAACAATAATTGTGTGGCAGTCGGACTGGCCAGCGGGGCCTTTCCT
TTGGAGGGATACATGCCGGGGTGGGATGCGGCATCATACGCGTTCCATTC
AGACGACGGAGGGATCTTCCACGGCACTGGCATCAAGGTGCGTTATTACG
GATCTCCGTATGGACCCGGCGATGTTGTGGGATGCGGGCTGGACTATAAA
ACGAAGGAAATATTCTTCACATTAAACGGGGTTTACCTAGGCGTGGCTTT
CAAGCTAGAGGGGGAGGGAGGGAGAGAAGACGTGCCGCTGTATCCGACGG
TGGGGATCGACAGCTCGCACCCGGTTCAGTTGAATTTCGGGGAGGAGCCG
TTCGTGTTTGATTTGGGGAAGTATATGGAGGGAGGGAGGGAAGAAGGGAG
GGAGGGAGGGGTGGTGTAGGGTGGAGGTGGAAAGAGAGGATGACAGGAGA
TGGGAGCTAT back to topprotein sequence of jgi.p|Nanoce1779_2|600428 >mRNA_7894-protein ID=mRNA_7894-protein|Name=jgi.p|Nanoce1779_2|600428|organism=Nannochloropsis oceanica|type=polypeptide|length=212bp
MDVEEDDQEDEENDADDVAILAAAAHHQLHQHHADQPPVLPPALNHHHHH
HHHHQHHNHNVHNHNNNNDNNNNNNNNCVAVGLASGAFPLEGYMPGWDAA
SYAFHSDDGGIFHGTGIKVRYYGSPYGPGDVVGCGLDYKTKEIFFTLNGV
YLGVAFKLEGEGGREDVPLYPTVGIDSSHPVQLNFGEEPFVFDLGKYMEG
GREEGREGGVV* back to topmRNA from alignment at scaffold_22:109015..110046- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7894 ID=mRNA_7894|Name=jgi.p|Nanoce1779_2|600428|organism=Nannochloropsis oceanica|type=mRNA|length=1032bp|location=Sequence derived from alignment at scaffold_22:109015..110046- (Nannochloropsis oceanica)
CCCCCAGCCGCCCCTTGAGAATGCTGTGGTAGCGGAGGAGGGGGGGGGGG
GAGGAGGAGGAGGGAGAGGAAGATTTCTTCCTGATGGATGTAGAGGAGGA
CGACCAGGAGGACGAGGAAAACGATGCGGATGACGTTGCCATTTTGGCAG
CAGCTGCTCATCATCAATTACATCAACATCACGCCGATCAACCCCCCGTC
CTCCCTCCCGCCCTCAACCACCACCACCACCACCACCACCACCACCAGCA
TCACAATCACAATGTTCACAACCACAACAACAACAACGACAACAACAACA
ACAACAACAACAACAACAACAACAACAACGACAACAACAACAGCAACAAC
AATAATTGTGTGGCAGTCGGACTGGCCAGCGGGGCCTTTCCTTTGGAGGG
ATACATGCCGGGGTGGGATGCGGCATCATACGCGTTCCATTCAGACGACG
GAGGGATCTTCCACGGCACTGGCATCAAGGTGACCTTTCCCTCCATCCCT
CCCACCCCCACTCCCTCCTTCCCTTGTGTCTGCTGGTCTCCATCCCCACA
GCCATTCTGTGGACCCCCGGGAGCCCGTCATAGGGACACCCACATCGGAC
TTTCCATTCATTCACTCCCTTCCAACAAACCCTACAACCTCTGACTCCCT
CCCTCCCTCCCTCCCTCCTTCCCTTCCCCTCTCCCTCCCTCCTTCCTTCC
TAATCTCAGGTGCGTTATTACGGATCTCCGTATGGACCCGGCGATGTTGT
GGGATGCGGGCTGGACTATAAAACGAAGGAAATATTCTTCACATTAAACG
GGGTTTACCTAGGCGTGGCTTTCAAGCTAGAGGGGGAGGGAGGGAGAGAA
GACGTGCCGCTGTATCCGACGGTGGGGATCGACAGCTCGCACCCGGTTCA
GTTGAATTTCGGGGAGGAGCCGTTCGTGTTTGATTTGGGGAAGTATATGG
AGGGAGGGAGGGAAGAAGGGAGGGAGGGAGGGGTGGTGTAGGGTGGAGGT
GGAAAGAGAGGATGACAGGAGATGGGAGCTAT back to topCoding sequence (CDS) from alignment at scaffold_22:109015..110046- >mRNA_7894 ID=mRNA_7894|Name=jgi.p|Nanoce1779_2|600428|organism=Nannochloropsis oceanica|type=CDS|length=1908bp|location=Sequence derived from alignment at scaffold_22:109015..110046- (Nannochloropsis oceanica)
GTGCGTTATTACGGATCTCCGTATGGACCCGGCGATGTTGTGGGATGCGG
GCTGGACTATAAAACGAAGGAAATATTCTTCACATTAAACGGGGTTTACC
TAGGCGTGGCTTTCAAGCTAGAGGGGGAGGGAGGGAGAGAAGACGTGCCG
CTGTATCCGACGGTGGGGATCGACAGCTCGCACCCGGTTCAGTTGAATTT
CGGGGAGGAGCCGTTCGTGTTTGATTTGGGGAAGTATATGGAGGGAGGGA
GGGAAGAAGGGAGGGAGGGAGGGGTGGTGTAGCAACAACAATAATTGTGT
GGCAGTCGGACTGGCCAGCGGGGCCTTTCCTTTGGAGGGATACATGCCGG
GGTGGGATGCGGCATCATACGCGTTCCATTCAGACGACGGAGGGATCTTC
CACGGCACTGGCATCAAGATGGATGTAGAGGAGGACGACCAGGAGGACGA
GGAAAACGATGCGGATGACGTTGCCATTTTGGCAGCAGCTGCTCATCATC
AATTACATCAACATCACGCCGATCAACCCCCCGTCCTCCCTCCCGCCCTC
AACCACCACCACCACCACCACCACCACCACCAGCATCACAATCACAATGT
TCACAACCACAACAACAACAACGACAACAACAACAAGTGCGTTATTACGG
ATCTCCGTATGGACCCGGCGATGTTGTGGGATGCGGGCTGGACTATAAAA
CGAAGGAAATATTCTTCACATTAAACGGGGTTTACCTAGGCGTGGCTTTC
AAGCTAGAGGGGGAGGGAGGGAGAGAAGACGTGCCGCTGTATCCGACGGT
GGGGATCGACAGCTCGCACCCGGTTCAGTTGAATTTCGGGGAGGAGCCGT
TCGTGTTTGATTTGGGGAAGTATATGGAGGGAGGGAGGGAAGAAGGGAGG
GAGGGAGGGGTGGTGTAGCAACAACAATAATTGTGTGGCAGTCGGACTGG
CCAGCGGGGCCTTTCCTTTGGAGGGATACATGCCGGGGTGGGATGCGGCA
TCATACGCGTTCCATTCAGACGACGGAGGGATCTTCCACGGCACTGGCAT
CAAGATGGATGTAGAGGAGGACGACCAGGAGGACGAGGAAAACGATGCGG
ATGACGTTGCCATTTTGGCAGCAGCTGCTCATCATCAATTACATCAACAT
CACGCCGATCAACCCCCCGTCCTCCCTCCCGCCCTCAACCACCACCACCA
CCACCACCACCACCACCAGCATCACAATCACAATGTTCACAACCACAACA
ACAACAACGACAACAACAACAAGTGCGTTATTACGGATCTCCGTATGGAC
CCGGCGATGTTGTGGGATGCGGGCTGGACTATAAAACGAAGGAAATATTC
TTCACATTAAACGGGGTTTACCTAGGCGTGGCTTTCAAGCTAGAGGGGGA
GGGAGGGAGAGAAGACGTGCCGCTGTATCCGACGGTGGGGATCGACAGCT
CGCACCCGGTTCAGTTGAATTTCGGGGAGGAGCCGTTCGTGTTTGATTTG
GGGAAGTATATGGAGGGAGGGAGGGAAGAAGGGAGGGAGGGAGGGGTGGT
GTAGCAACAACAATAATTGTGTGGCAGTCGGACTGGCCAGCGGGGCCTTT
CCTTTGGAGGGATACATGCCGGGGTGGGATGCGGCATCATACGCGTTCCA
TTCAGACGACGGAGGGATCTTCCACGGCACTGGCATCAAGATGGATGTAG
AGGAGGACGACCAGGAGGACGAGGAAAACGATGCGGATGACGTTGCCATT
TTGGCAGCAGCTGCTCATCATCAATTACATCAACATCACGCCGATCAACC
CCCCGTCCTCCCTCCCGCCCTCAACCACCACCACCACCACCACCACCACC
ACCAGCATCACAATCACAATGTTCACAACCACAACAACAACAACGACAAC
AACAACAA back to top
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