jgi.p|Nanoce1779_2|532147, mRNA_7869 (mRNA) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|532147
Unique NamemRNA_7869
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length771
Alignment locationscaffold_22:32046..32816 -

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Properties
Property NameValue
TranscriptId532233
TrackFilteredModels2
ProteinId532147
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_22supercontigscaffold_22:32046..32816 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|532147gene_7869Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS_7869CDS_7869Nannochloropsis oceanica (N. oceanica CCMP1779)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|532147mRNA_7869-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>mRNA_7869 ID=mRNA_7869|Name=jgi.p|Nanoce1779_2|532147|organism=Nannochloropsis oceanica|type=mRNA|length=771bp
ATGATCAATTACGACAACGACGACGATCACAACGGTCCATCATCACCCCC
GTCCTATCCTACGCCGGAGGAGAAAGAGGGCCGTAAAAAGAGGGTACTGA
CGTCATTATTACTTTTCCGCCTCCTCACACGTGCCGGAGGCGTTGAGCAC
CAGCCGGGGTCCAATCCCCTTAACTCTACCTCTTCTTCTTTCTCCCGCCA
TCGTCTCCTCCTCTTCCGTCGCCTCCTAGCTCGCCTCCATGGCAGCAACT
CTTCCTCCTCCTCGCCATCCTTTCTCGCGCGCCTTCAAACCGGCATGTCC
GAACACGACGGGGAAATTTTGCGCATTTCCCTCCCCGCCCTCCTCACCCT
CCTCGTCGATCCTTTTCTATCTTTGTGCGACACGGCCTATGTCGCCAGAG
TGGGCACCATTGCCTTGGCGTCCCTCGGTCCGTGCACCTCGATCTTCCAC
CTGTCCTTCAACGCTTTTCGGGCCTTCAGCCAGAGTACAACCTCCCTCGT
CTCCTCCTCCCTGGCCGTGGGGGACAAGAAACGGGTGCGTAGTGTCGTGC
TCCAGGCCCTTGTCCTTGCCTCTGCTCTGGGCTCCCTGGTGGCCTTCTTC
CTCTCCACCCAGGCGGCATTCGCCCTCTCCTTGATGGGCGCCCCGCCGTC
CTCCCTCCTCGCCCGTACCGGCCTCCCGTACCTCAGGGCGCGGGCCCTTG
CCGCACCTGCAGTGCTGACGCTCATGGTTTGTGAAGGGGCTTACAGAGGG
TTTGGCGACACCTTGACCCCT
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protein sequence of jgi.p|Nanoce1779_2|532147

>mRNA_7869-protein ID=mRNA_7869-protein|Name=jgi.p|Nanoce1779_2|532147|organism=Nannochloropsis oceanica|type=polypeptide|length=257bp
MINYDNDDDHNGPSSPPSYPTPEEKEGRKKRVLTSLLLFRLLTRAGGVEH
QPGSNPLNSTSSSFSRHRLLLFRRLLARLHGSNSSSSSPSFLARLQTGMS
EHDGEILRISLPALLTLLVDPFLSLCDTAYVARVGTIALASLGPCTSIFH
LSFNAFRAFSQSTTSLVSSSLAVGDKKRVRSVVLQALVLASALGSLVAFF
LSTQAAFALSLMGAPPSSLLARTGLPYLRARALAAPAVLTLMVCEGAYRG
FGDTLTP
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mRNA from alignment at scaffold_22:32046..32816-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7869 ID=mRNA_7869|Name=jgi.p|Nanoce1779_2|532147|organism=Nannochloropsis oceanica|type=mRNA|length=771bp|location=Sequence derived from alignment at scaffold_22:32046..32816- (Nannochloropsis oceanica)
ATGATCAATTACGACAACGACGACGATCACAACGGTCCATCATCACCCCC
GTCCTATCCTACGCCGGAGGAGAAAGAGGGCCGTAAAAAGAGGGTACTGA
CGTCATTATTACTTTTCCGCCTCCTCACACGTGCCGGAGGCGTTGAGCAC
CAGCCGGGGTCCAATCCCCTTAACTCTACCTCTTCTTCTTTCTCCCGCCA
TCGTCTCCTCCTCTTCCGTCGCCTCCTAGCTCGCCTCCATGGCAGCAACT
CTTCCTCCTCCTCGCCATCCTTTCTCGCGCGCCTTCAAACCGGCATGTCC
GAACACGACGGGGAAATTTTGCGCATTTCCCTCCCCGCCCTCCTCACCCT
CCTCGTCGATCCTTTTCTATCTTTGTGCGACACGGCCTATGTCGCCAGAG
TGGGCACCATTGCCTTGGCGTCCCTCGGTCCGTGCACCTCGATCTTCCAC
CTGTCCTTCAACGCTTTTCGGGCCTTCAGCCAGAGTACAACCTCCCTCGT
CTCCTCCTCCCTGGCCGTGGGGGACAAGAAACGGGTGCGTAGTGTCGTGC
TCCAGGCCCTTGTCCTTGCCTCTGCTCTGGGCTCCCTGGTGGCCTTCTTC
CTCTCCACCCAGGCGGCATTCGCCCTCTCCTTGATGGGCGCCCCGCCGTC
CTCCCTCCTCGCCCGTACCGGCCTCCCGTACCTCAGGGCGCGGGCCCTTG
CCGCACCTGCAGTGCTGACGCTCATGGTTTGTGAAGGGGCTTACAGAGGG
TTTGGCGACACCTTGACCCCT
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Coding sequence (CDS) from alignment at scaffold_22:32046..32816-

>mRNA_7869 ID=mRNA_7869|Name=jgi.p|Nanoce1779_2|532147|organism=Nannochloropsis oceanica|type=CDS|length=771bp|location=Sequence derived from alignment at scaffold_22:32046..32816- (Nannochloropsis oceanica)
ATGATCAATTACGACAACGACGACGATCACAACGGTCCATCATCACCCCC
GTCCTATCCTACGCCGGAGGAGAAAGAGGGCCGTAAAAAGAGGGTACTGA
CGTCATTATTACTTTTCCGCCTCCTCACACGTGCCGGAGGCGTTGAGCAC
CAGCCGGGGTCCAATCCCCTTAACTCTACCTCTTCTTCTTTCTCCCGCCA
TCGTCTCCTCCTCTTCCGTCGCCTCCTAGCTCGCCTCCATGGCAGCAACT
CTTCCTCCTCCTCGCCATCCTTTCTCGCGCGCCTTCAAACCGGCATGTCC
GAACACGACGGGGAAATTTTGCGCATTTCCCTCCCCGCCCTCCTCACCCT
CCTCGTCGATCCTTTTCTATCTTTGTGCGACACGGCCTATGTCGCCAGAG
TGGGCACCATTGCCTTGGCGTCCCTCGGTCCGTGCACCTCGATCTTCCAC
CTGTCCTTCAACGCTTTTCGGGCCTTCAGCCAGAGTACAACCTCCCTCGT
CTCCTCCTCCCTGGCCGTGGGGGACAAGAAACGGGTGCGTAGTGTCGTGC
TCCAGGCCCTTGTCCTTGCCTCTGCTCTGGGCTCCCTGGTGGCCTTCTTC
CTCTCCACCCAGGCGGCATTCGCCCTCTCCTTGATGGGCGCCCCGCCGTC
CTCCCTCCTCGCCCGTACCGGCCTCCCGTACCTCAGGGCGCGGGCCCTTG
CCGCACCTGCAGTGCTGACGCTCATGGTTTGTGAAGGGGCTTACAGAGGG
TTTGGCGACACCTTGACCCCT
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Synonyms
Publications