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Properties
Property Name | Value |
TranscriptId | 170702 |
Track | FilteredModels2 |
ProteinId | 170616 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_21 | supercontig | scaffold_21:501999..503745 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7849 ID=mRNA_7849|Name=jgi.p|Nanoce1779_2|170616|organism=Nannochloropsis oceanica|type=mRNA|length=1307bp GGAGGGAGAGGGAGAATAGGGAAGGAGGAAGGGAAAGAGGGAGAGAAGGA GGGAGAGAAGTCTGAAGGAAGGTCGAATTGGTTGTGTCCCTCTTTTCTTT CTCGCGGGGGGGGGGGTAAATAATTCACTCTATCTCCTTCACATTAATCA CTACTCTACTTATCATTATATTAATTCACTTCTTTGCTAAACAGGCGGTT TGAGAGCGAGTCCTCCTATGTTCCTGTTCGCGTTACGCCGGGAATGAAGC CACCGAGCCCCGCCCAAGAAGCTGCGCTTCGACAGCTCCTTCTTGCCGGA CACCTCGACCAAGTCGCGCGCCTTGCCCCCGTAGGCACCGTCACGCAAGG CAGCAAGCTTCAACGTCAGTGTGCCTACCTAGGGTGCACTTCGGCCTTGA CCGAGCCTCTGTACATTCACCCGCATTCCTCGCTGTTTTCACCCGACCCG GAACGACTACCGGAATGGGTGTGTTATCAGGAAATCACCCGTTCTGCCAA GGGCCTCAACTACATGACCTGTATCACCGCCCTCGACCCCGATTGGCTCC CACCTCTCGCCCTGCACACACCTCTCCTCTCCTTCCATCCCCCACTCTCC TCCCCACCGCCCTCCTTCGACCCCTCCCGGGATGCCATTGTCTTTTATTG CGTGCCCAAGTACGGTTGTCGGAATTGGGAGCTTCGGCCTTACCCCTTGA CAGGGAAAGACTTGCTTCGTTTCTCTTCTTCCTCCTCTTCCTCGACCTCT TCCCTCCTGCCTTCGACCCTAGCCCAGAAAAAGCAGGAGGAGGGCAGGGC AGAGACGATGCGGGAAAATGAATGTCGGTGGTTTGCACGGGCCTTGCTGG AAGGCAAGGTGCTGTCGGCATGGTCGAGCTTCTACCGTCAACCACCCACC ACCACGAGCAGCCGCCTGCGTGACGAGGACGAGGAAGGGGAGGAGGAGCA GCAGCAGGTGGGAAACAGCAAATCCTCTTTGCCATTATACTCCGCATTTT TGAACGACCCCCCTGCTTTGATCACGCATAAACGTCCTGTCCGAAAGGTC TTCGAAGTCTTGCAGCCTCTGATCGATGCCCGCGTTTCTTCGCTTGCGGC CCTCCGAAGAGAATGGGCTCGAGACGCAACCTTCTTAAAGAGGGGAATCA AAATGTGGGTAAGGTCCGAGCGAATGGCTGAATTTGATGCACTGTGGAAG AAGACGCTTGTGACTGTGCCGGAGAAGTAGACAGATTGGTAGGAAAGCAT AGGTGAATTTTGATGTGTACCTAAAAAGCAAGTTATTGAAACAAGACAGA AATTGGG back to topprotein sequence of jgi.p|Nanoce1779_2|170616 >mRNA_7849-protein ID=mRNA_7849-protein|Name=jgi.p|Nanoce1779_2|170616|organism=Nannochloropsis oceanica|type=polypeptide|length=329bp MKPPSPAQEAALRQLLLAGHLDQVARLAPVGTVTQGSKLQRQCAYLGCTS ALTEPLYIHPHSSLFSPDPERLPEWVCYQEITRSAKGLNYMTCITALDPD WLPPLALHTPLLSFHPPLSSPPPSFDPSRDAIVFYCVPKYGCRNWELRPY PLTGKDLLRFSSSSSSSTSSLLPSTLAQKKQEEGRAETMRENECRWFARA LLEGKVLSAWSSFYRQPPTTTSSRLRDEDEEGEEEQQQVGNSKSSLPLYS AFLNDPPALITHKRPVRKVFEVLQPLIDARVSSLAALRREWARDATFLKR GIKMWVRSERMAEFDALWKKTLVTVPEK* back to topmRNA from alignment at scaffold_21:501999..503745+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7849 ID=mRNA_7849|Name=jgi.p|Nanoce1779_2|170616|organism=Nannochloropsis oceanica|type=mRNA|length=1747bp|location=Sequence derived from alignment at scaffold_21:501999..503745+ (Nannochloropsis oceanica) GGAGGGAGAGGGAGAATAGGGAAGGAGGAAGGGAAAGAGGGAGAGAAGGA
GGGAGAGAAGTCTGAAGGAAGGTCGAATTGGTTGTGTCCCTCTTTTCTTT
CTCGCGGGGGGGGGGGTAAATAATTCACTCTATCTCCTTCACATTAATCA
CTACTCTACTTATCATTATATTAATTCACTTCTTTGCTAAACAGGCGGTT
TGAGAGCGAGTCCTCCTATGTTCCTGTTCGCGTTACGCCGGGAATGAAGC
CACCGAGCCCCGCCCAAGAAGCTGCGCTTCGACAGGTGAGAATGTGGAGA
GGGAGGGAGGGAGGGAGTGGGGGAGGGTGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAAGAAGGAAGGAAGGAAGGGAGGGAGGGAGGGAGGGAGGGA
GGGAGGGAGGAGGGAATTTACAAAATGGAAGGAAGACCATGTCGTACAAG
TGTCTGAAGAGATCTCACCTTTACTATCCTATTTTCCTCCCTCCTGCCCT
CCTTTTCTATTGCCCTTGCCTTTCTGCTCTCCTTCCCTCCTTCCCTCCTT
CCCTCCTTCCCGCCGTCCCTTAGCTCCTTCTTGCCGGACACCTCGACCAA
GTCGCGCGCCTTGCCCCCGTAGGCACCGTCACGCAAGGCAGCAAGCTTCA
ACGTCAGTGTGCCTACCTAGGGTGCACTTCGGCCTTGACCGAGCCTCTGT
ACATTCACCCGCATTCCTCGCTGTTTTCACCCGACCCGGAACGACTACCG
GAATGGGTGTGTTATCAGGTAAACGAGGGGGGAGGGAGGGAGAGAGGGAG
GAAGGGAAGGAGGGAGGGAGGGACGAAAGAAATACAAAAGCCTTCCCCCC
ATCTACTTCGGACCACCATTCACGTTTTTCCCACACTCTCCTGTCCCTCC
TCCTTTCCCTCCCTTCCCAGGAAATCACCCGTTCTGCCAAGGGCCTCAAC
TACATGACCTGTATCACCGCCCTCGACCCCGATTGGCTCCCACCTCTCGC
CCTGCACACACCTCTCCTCTCCTTCCATCCCCCACTCTCCTCCCCACCGC
CCTCCTTCGACCCCTCCCGGGATGCCATTGTCTTTTATTGCGTGCCCAAG
TACGGTTGTCGGAATTGGGAGCTTCGGCCTTACCCCTTGACAGGGAAAGA
CTTGCTTCGTTTCTCTTCTTCCTCCTCTTCCTCGACCTCTTCCCTCCTGC
CTTCGACCCTAGCCCAGAAAAAGCAGGAGGAGGGCAGGGCAGAGACGATG
CGGGAAAATGAATGTCGGTGGTTTGCACGGGCCTTGCTGGAAGGCAAGGT
GCTGTCGGCATGGTCGAGCTTCTACCGTCAACCACCCACCACCACGAGCA
GCCGCCTGCGTGACGAGGACGAGGAAGGGGAGGAGGAGCAGCAGCAGGTG
GGAAACAGCAAATCCTCTTTGCCATTATACTCCGCATTTTTGAACGACCC
CCCTGCTTTGATCACGCATAAACGTCCTGTCCGAAAGGTCTTCGAAGTCT
TGCAGCCTCTGATCGATGCCCGCGTTTCTTCGCTTGCGGCCCTCCGAAGA
GAATGGGCTCGAGACGCAACCTTCTTAAAGAGGGGAATCAAAATGTGGGT
AAGGTCCGAGCGAATGGCTGAATTTGATGCACTGTGGAAGAAGACGCTTG
TGACTGTGCCGGAGAAGTAGACAGATTGGTAGGAAAGCATAGGTGAATTT
TGATGTGTACCTAAAAAGCAAGTTATTGAAACAAGACAGAAATTGGG back to topCoding sequence (CDS) from alignment at scaffold_21:501999..503745+ >mRNA_7849 ID=mRNA_7849|Name=jgi.p|Nanoce1779_2|170616|organism=Nannochloropsis oceanica|type=CDS|length=2961bp|location=Sequence derived from alignment at scaffold_21:501999..503745+ (Nannochloropsis oceanica) ATGAAGCCACCGAGCCCCGCCCAAGAAGCTGCGCTTCGACAGCTCCTTCT TGCCGGACACCTCGACCAAGTCGCGCGCCTTGCCCCCGTAGGCACCGTCA CGCAAGGCAGCAAGCTTCAACGTCAGTGTGCCTACCTAGGGTGCACTTCG GCCTTGACCGAGCCTCTGTACATTCACCCGCATTCCTCGCTGTTTTCACC CGACCCGGAACGACTACCGGAATGGGTGTGTTATCAGGAAATCACCCGTT CTGCCAAGGGCCTCAACTACATGACCTGTATCACCGCCCTCGACCCCGAT TGGCTCCCACCTCTCGCCCTGCACACACCTCTCCTCTCCTTCCATCCCCC ACTCTCCTCCCCACCGCCCTCCTTCGACCCCTCCCGGGATGCCATTGTCT TTTATTGCGTGCCCAAGTACGGTTGTCGGAATTGGGAGCTTCGGCCTTAC CCCTTGACAGGGAAAGACTTGCTTCGTTTCTCTTCTTCCTCCTCTTCCTC GACCTCTTCCCTCCTGCCTTCGACCCTAGCCCAGAAAAAGCAGGAGGAGG GCAGGGCAGAGACGATGCGGGAAAATGAATGTCGGTGGTTTGCACGGGCC TTGCTGGAAGGCAAGGTGCTGTCGGCATGGTCGAGCTTCTACCGTCAACC ACCCACCACCACGAGCAGCCGCCTGCGTGACGAGGACGAGGAAGGGGAGG AGGAGCAGCAGCAGGTGGGAAACAGCAAATCCTCTTTGCCATTATACTCC GCATTTTTGAACGACCCCCCTGCTTTGATCACGCATAAACGTCCTGTCCG AAAGGTCTTCGAAGTCTTGCAGCCTCTGATCGATGCCCGCGTTTCTTCGC TTGCGGCCCTCCGAAGAGAATGGGCTCGAGACGCAACCTTCTTAAAGAGG GGAATCAAAATGTGGGTAAGGTCCGAGCGAATGGCTGAATTTGATGCACT GTGGAAGAAGACGCTTGTGACTGTGCCGGAGAAGTAGATGAAGCCACCGA GCCCCGCCCAAGAAGCTGCGCTTCGACAGCTCCTTCTTGCCGGACACCTC GACCAAGTCGCGCGCCTTGCCCCCGTAGGCACCGTCACGCAAGGCAGCAA GCTTCAACGTCAGTGTGCCTACCTAGGGTGCACTTCGGCCTTGACCGAGC CTCTGTACATTCACCCGCATTCCTCGCTGTTTTCACCCGACCCGGAACGA CTACCGGAATGGGTGTGTTATCAGGAAATCACCCGTTCTGCCAAGGGCCT CAACTACATGACCTGTATCACCGCCCTCGACCCCGATTGGCTCCCACCTC TCGCCCTGCACACACCTCTCCTCTCCTTCCATCCCCCACTCTCCTCCCCA CCGCCCTCCTTCGACCCCTCCCGGGATGCCATTGTCTTTTATTGCGTGCC CAAGTACGGTTGTCGGAATTGGGAGCTTCGGCCTTACCCCTTGACAGGGA AAGACTTGCTTCGTTTCTCTTCTTCCTCCTCTTCCTCGACCTCTTCCCTC CTGCCTTCGACCCTAGCCCAGAAAAAGCAGGAGGAGGGCAGGGCAGAGAC GATGCGGGAAAATGAATGTCGGTGGTTTGCACGGGCCTTGCTGGAAGGCA AGGTGCTGTCGGCATGGTCGAGCTTCTACCGTCAACCACCCACCACCACG AGCAGCCGCCTGCGTGACGAGGACGAGGAAGGGGAGGAGGAGCAGCAGCA GGTGGGAAACAGCAAATCCTCTTTGCCATTATACTCCGCATTTTTGAACG ACCCCCCTGCTTTGATCACGCATAAACGTCCTGTCCGAAAGGTCTTCGAA GTCTTGCAGCCTCTGATCGATGCCCGCGTTTCTTCGCTTGCGGCCCTCCG AAGAGAATGGGCTCGAGACGCAACCTTCTTAAAGAGGGGAATCAAAATGT GGGTAAGGTCCGAGCGAATGGCTGAATTTGATGCACTGTGGAAGAAGACG CTTGTGACTGTGCCGGAGAAGTAGATGAAGCCACCGAGCCCCGCCCAAGA AGCTGCGCTTCGACAGCTCCTTCTTGCCGGACACCTCGACCAAGTCGCGC GCCTTGCCCCCGTAGGCACCGTCACGCAAGGCAGCAAGCTTCAACGTCAG TGTGCCTACCTAGGGTGCACTTCGGCCTTGACCGAGCCTCTGTACATTCA CCCGCATTCCTCGCTGTTTTCACCCGACCCGGAACGACTACCGGAATGGG TGTGTTATCAGGAAATCACCCGTTCTGCCAAGGGCCTCAACTACATGACC TGTATCACCGCCCTCGACCCCGATTGGCTCCCACCTCTCGCCCTGCACAC ACCTCTCCTCTCCTTCCATCCCCCACTCTCCTCCCCACCGCCCTCCTTCG ACCCCTCCCGGGATGCCATTGTCTTTTATTGCGTGCCCAAGTACGGTTGT CGGAATTGGGAGCTTCGGCCTTACCCCTTGACAGGGAAAGACTTGCTTCG TTTCTCTTCTTCCTCCTCTTCCTCGACCTCTTCCCTCCTGCCTTCGACCC TAGCCCAGAAAAAGCAGGAGGAGGGCAGGGCAGAGACGATGCGGGAAAAT GAATGTCGGTGGTTTGCACGGGCCTTGCTGGAAGGCAAGGTGCTGTCGGC ATGGTCGAGCTTCTACCGTCAACCACCCACCACCACGAGCAGCCGCCTGC GTGACGAGGACGAGGAAGGGGAGGAGGAGCAGCAGCAGGTGGGAAACAGC AAATCCTCTTTGCCATTATACTCCGCATTTTTGAACGACCCCCCTGCTTT GATCACGCATAAACGTCCTGTCCGAAAGGTCTTCGAAGTCTTGCAGCCTC TGATCGATGCCCGCGTTTCTTCGCTTGCGGCCCTCCGAAGAGAATGGGCT CGAGACGCAACCTTCTTAAAGAGGGGAATCAAAATGTGGGTAAGGTCCGA GCGAATGGCTGAATTTGATGCACTGTGGAAGAAGACGCTTGTGACTGTGC CGGAGAAGTAG back to top
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