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Properties
| Property Name | Value |
|---|
| TranscriptId | 632642 |
| Track | FilteredModels2 |
| ProteinId | 632556 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_21 | supercontig | scaffold_21:496200..497173 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7847 ID=mRNA_7847|Name=jgi.p|Nanoce1779_2|632556|organism=Nannochloropsis oceanica|type=mRNA|length=892bp
AACAGATATAAACCCCACGAGTATCATAGCGCCCGCGCTGCACCCACCAG
ACAAATGGGCAAGAAGCAACGTGCCCGAAGGGTACAGCAACAGCAAAAGG
CTAAGCAGCGGATCAGAAGTGAAAATAAGTCAGCTTCCCAGACATCGCAA
GATGGCGACGACGAGCAAGAAGCAGAGATGCAACAAGCAAGAGGAGAAAC
AGAGGCTTTGTTGTCATCCGAGCTCGCGGCTGCGTTAGGCCAGCAGGCGG
AAGGTGGAGGGGGGGGAGACGCAGTGATTCTGGCCTCTACCACGATTCAG
AATAGCAACGGCAGTAATAAGAGGAAGCTTGACGCCCGAGGCAATGTTTT
CGAGGAAGAGGCCCTCGTCGACGCCCGCAAAATGAGCAAGCGCATGAAAA
AACGCCTCGTACAAATCAGTCTCCGCAAAGAAAAAGAGGGTAAACGCGCC
TCTCTGTACCAATCACTCGCCGAGCAACAGCTTTCACCTGCCACCCACGC
GCTCCTTCGTTCTTCCAAAGCCTTCTCCCAAGGTAAAGAGACCTTGAGAA
AACGAATGTCCCATGCCCTAGGACGGCATCGAGCTGGCCTTCCAGTTGAC
GATGAAGAGGCTTTTGACATGTTGTTCAGAAAGAGGGGCGAGGGGGAGGA
AGGAGAGGAGGGACTGCCCTTGTCTTTGCTTCCTCCTTCCCTGCCCCCTA
CTCCTCCTCCCGAGCCTGAGCTTGTGCAGAAGACTGATGTAAGAGAGGGA
GAGAAGAAAGGAGAGAAAGAAGGGGAGATAAAAGGCAAGAAGGTGGATGT
GGAGAAGAAGAGGGAGGCGCGAAGGGCAACCAAAGCGAGACGCCGACAGC
GGAAGGAGGAGGCAGCAGCTGCTGCAGCCAGTGGGGGATGGG back to topprotein sequence of jgi.p|Nanoce1779_2|632556 >mRNA_7847-protein ID=mRNA_7847-protein|Name=jgi.p|Nanoce1779_2|632556|organism=Nannochloropsis oceanica|type=polypeptide|length=279bp
MGKKQRARRVQQQQKAKQRIRSENKSASQTSQDGDDEQEAEMQQARGETE
ALLSSELAAALGQQAEGGGGGDAVILASTTIQNSNGSNKRKLDARGNVFE
EEALVDARKMSKRMKKRLVQISLRKEKEGKRASLYQSLAEQQLSPATHAL
LRSSKAFSQGKETLRKRMSHALGRHRAGLPVDDEEAFDMLFRKRGEGEEG
EEGLPLSLLPPSLPPTPPPEPELVQKTDVREGEKKGEKEGEIKGKKVDVE
KKREARRATKARRRQRKEEAAAAAASGGW back to topmRNA from alignment at scaffold_21:496200..497173+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7847 ID=mRNA_7847|Name=jgi.p|Nanoce1779_2|632556|organism=Nannochloropsis oceanica|type=mRNA|length=974bp|location=Sequence derived from alignment at scaffold_21:496200..497173+ (Nannochloropsis oceanica)
AACAGATATAAACCCCACGAGTATCATAGCGCCCGCGCTGCACCCACCAG
ACAAATGGGCAAGAAGCAACGTGCCCGAAGGGTACAGCAACAGCAAAAGG
CTAAGCAGCGGATCAGAAGTGAAAATAAGTCAGCTTCCCAGACATCGCAA
GATGGCGACGACGAGCAAGAAGCAGAGATGCAACAAGCAAGAGGAGAAAC
AGAGGCTTTGTTGTCATCCGAGCTCGCGGCTGCGTTAGGCCAGCAGGCGG
AAGGTGGAGGGGGGGGAGACGCAGTGATTCTGGCCTCTACCACGATTCAG
AATAGCAACGGCAGTAATAAGAGGAAGCTTGACGCCCGAGGCAATGTTTT
CGAGGAAGAGGTATGTCGTCTGTGCTTATCGTGATGCTCCGGTAGACACG
GCTCGTTTTTTACCACCAATCCTCCCCTCCCTTTCTTACAAGGCCCTCGT
CGACGCCCGCAAAATGAGCAAGCGCATGAAAAAACGCCTCGTACAAATCA
GTCTCCGCAAAGAAAAAGAGGGTAAACGCGCCTCTCTGTACCAATCACTC
GCCGAGCAACAGCTTTCACCTGCCACCCACGCGCTCCTTCGTTCTTCCAA
AGCCTTCTCCCAAGGTAAAGAGACCTTGAGAAAACGAATGTCCCATGCCC
TAGGACGGCATCGAGCTGGCCTTCCAGTTGACGATGAAGAGGCTTTTGAC
ATGTTGTTCAGAAAGAGGGGCGAGGGGGAGGAAGGAGAGGAGGGACTGCC
CTTGTCTTTGCTTCCTCCTTCCCTGCCCCCTACTCCTCCTCCCGAGCCTG
AGCTTGTGCAGAAGACTGATGTAAGAGAGGGAGAGAAGAAAGGAGAGAAA
GAAGGGGAGATAAAAGGCAAGAAGGTGGATGTGGAGAAGAAGAGGGAGGC
GCGAAGGGCAACCAAAGCGAGACGCCGACAGCGGAAGGAGGAGGCAGCAG
CTGCTGCAGCCAGTGGGGGATGGG back to topCoding sequence (CDS) from alignment at scaffold_21:496200..497173+ >mRNA_7847 ID=mRNA_7847|Name=jgi.p|Nanoce1779_2|632556|organism=Nannochloropsis oceanica|type=CDS|length=1674bp|location=Sequence derived from alignment at scaffold_21:496200..497173+ (Nannochloropsis oceanica)
ATGGGCAAGAAGCAACGTGCCCGAAGGGTACAGCAACAGCAAAAGGCTAA
GCAGCGGATCAGAAGTGAAAATAAGTCAGCTTCCCAGACATCGCAAGATG
GCGACGACGAGCAAGAAGCAGAGATGCAACAAGCAAGAGGAGAAACAGAG
GCTTTGTTGTCATCCGAGCTCGCGGCTGCGTTAGGCCAGCAGGCGGAAGG
TGGAGGGGGGGGAGACGCAGTGATTCTGGCCTCTACCACGATTCAGAATA
GCAACGGCAGTAATAAGAGGAAGCTTGACGCCCGAGGCAATGTTTTCGAG
GAAGAGGCCCTCGTCGACGCCCGCAAAATGAGCAAGCGCATGAAAAAACG
CCTCGTACAAATCAGTCTCCGCAAAGAAAAAGAGGGTAAACGCGCCTCTC
TGTACCAATCACTCGCCGAGCAACAGCTTTCACCTGCCACCCACGCGCTC
CTTCGTTCTTCCAAAGCCTTCTCCCAAGGTAAAGAGACCTTGAGAAAACG
AATGTCCCATGCCCTAGGACGGCATCGAGCTGGCCTTCCAGTTGACGATG
AAGAGGCTTTTGACATGTTGTTCAGAAAGAGGGGCGAGGGGGAGGAAGGA
GAGGAGGGACTGCCCTTGTCTTTGCTTCCTCCTTCCCTGCCCCCTACTCC
TCCTCCCGAGCCTGAGCTTGTGCAGAAGACTGATGTAAGAGAGGGAGAGA
AGAAAGGAGAGAAAGAAGGGGAGATAAAAGGCAAGAAGGTGGATGTGGAG
AAGAAGAGGGAGGCGCGAAGGGCAACCAAAGCGAGACGCCGACAGCGGAA
GGAGGAGGCAGCAGCTGCTGCAGCCAGTGGGGGATGGATGGGCAAGAAGC
AACGTGCCCGAAGGGTACAGCAACAGCAAAAGGCTAAGCAGCGGATCAGA
AGTGAAAATAAGTCAGCTTCCCAGACATCGCAAGATGGCGACGACGAGCA
AGAAGCAGAGATGCAACAAGCAAGAGGAGAAACAGAGGCTTTGTTGTCAT
CCGAGCTCGCGGCTGCGTTAGGCCAGCAGGCGGAAGGTGGAGGGGGGGGA
GACGCAGTGATTCTGGCCTCTACCACGATTCAGAATAGCAACGGCAGTAA
TAAGAGGAAGCTTGACGCCCGAGGCAATGTTTTCGAGGAAGAGGCCCTCG
TCGACGCCCGCAAAATGAGCAAGCGCATGAAAAAACGCCTCGTACAAATC
AGTCTCCGCAAAGAAAAAGAGGGTAAACGCGCCTCTCTGTACCAATCACT
CGCCGAGCAACAGCTTTCACCTGCCACCCACGCGCTCCTTCGTTCTTCCA
AAGCCTTCTCCCAAGGTAAAGAGACCTTGAGAAAACGAATGTCCCATGCC
CTAGGACGGCATCGAGCTGGCCTTCCAGTTGACGATGAAGAGGCTTTTGA
CATGTTGTTCAGAAAGAGGGGCGAGGGGGAGGAAGGAGAGGAGGGACTGC
CCTTGTCTTTGCTTCCTCCTTCCCTGCCCCCTACTCCTCCTCCCGAGCCT
GAGCTTGTGCAGAAGACTGATGTAAGAGAGGGAGAGAAGAAAGGAGAGAA
AGAAGGGGAGATAAAAGGCAAGAAGGTGGATGTGGAGAAGAAGAGGGAGG
CGCGAAGGGCAACCAAAGCGAGACGCCGACAGCGGAAGGAGGAGGCAGCA
GCTGCTGCAGCCAGTGGGGGATGG back to top
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