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Properties
| Property Name | Value |
|---|
| TranscriptId | 600304 |
| Track | FilteredModels2 |
| ProteinId | 600218 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_21 | supercontig | scaffold_21:470049..471207 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7838 ID=mRNA_7838|Name=jgi.p|Nanoce1779_2|600218|organism=Nannochloropsis oceanica|type=mRNA|length=1025bp
AGACACGCACAATTACACAGGCAGACCATCTTCATCATGCTATACACTCT
TATTCTTATGTTGGCCGTTTCCACCTCCTCTATTTCGTCTTCCTTTCTCC
TCCCGTCTCCTGCTTCACCTCCTTGCGGCATTAGAATACCTGCTCCGCTT
CCTGCCTTCCTGGCCCCGTGGTCCTCCCTTTCCACCGCTACCGGCATCAA
AACTCCCCGCGCCCTTGTGCAGAAGGAGGATACTCTTCTGGAAGCTATTC
AGGGTCTTGACCGACGAGAGATCCAGAATAGCGCAGAGGCACGCGCACGC
GTCAAGAGCCTTATCGACGACCTGGAAGCTTCAAAGGGAATAAAGAAAGC
AACGGCCACCAAGGAAATCAATGGCAAATGGCGCTTGCTCTACACCTCCA
GCGATGGCACCGCCTCCCCCATTCAAAACACCTTTGTGGGCAGCAAGGCC
TTCGCCATCTACCAGGAAATCGACATCGCCCCCCCCTTGTCCTCTTCCTC
CTCCCCTTCCTCCCCCGCCACAGTCACCAACATCGTGGACTTCGGTGACT
CTATTGGTGCTCTTAACGTACAAGCATTGGCCAGCACACTCTTTCGACCC
ATCCCTGGCTTTGAGCCAAGGAAAGGGGACGGGAAATTCTTCGGCATCAA
CGTGCTGGGGGTGAGCAAGACGGAAGTGCCCCGCGACGGAGACCCAGCAG
ACCGCATCGACTTCAAGTTTGACAACGCTGGTTTTGACCTAGGCTTCCTC
CCCTTCCGTGTGCCCTATCCAGTGCCCTTCCGTCTGCTAGGGGATGAAGT
GAAAGGATGGTTGGAGGTGACGTATCTCTCGCCGCGGCTGAGGTTGTCGC
GGGGGAACAAGGGCACGATATTTGTACTGCAAAAGGTGGAGTGAGAGGAG
CTCGGGTGCATGTGACGGGGTGGAACATATTTGTGCGGGGGATCGTACGT
GTGCCAAAAATTGAAAGAAGAAAGAATTAGGTATCTACGACACGACCAGA
AGGTAGAAGGGAAAGCGTGCAATTG back to topprotein sequence of jgi.p|Nanoce1779_2|600218 >mRNA_7838-protein ID=mRNA_7838-protein|Name=jgi.p|Nanoce1779_2|600218|organism=Nannochloropsis oceanica|type=polypeptide|length=286bp
MLYTLILMLAVSTSSISSSFLLPSPASPPCGIRIPAPLPAFLAPWSSLST
ATGIKTPRALVQKEDTLLEAIQGLDRREIQNSAEARARVKSLIDDLEASK
GIKKATATKEINGKWRLLYTSSDGTASPIQNTFVGSKAFAIYQEIDIAPP
LSSSSSPSSPATVTNIVDFGDSIGALNVQALASTLFRPIPGFEPRKGDGK
FFGINVLGVSKTEVPRDGDPADRIDFKFDNAGFDLGFLPFRVPYPVPFRL
LGDEVKGWLEVTYLSPRLRLSRGNKGTIFVLQKVE* back to topmRNA from alignment at scaffold_21:470049..471207+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7838 ID=mRNA_7838|Name=jgi.p|Nanoce1779_2|600218|organism=Nannochloropsis oceanica|type=mRNA|length=1159bp|location=Sequence derived from alignment at scaffold_21:470049..471207+ (Nannochloropsis oceanica)
AGACACGCACAATTACACAGGCAGACCATCTTCATCATGCTATACACTCT
TATTCTTATGTTGGCCGTTTCCACCTCCTCTATTTCGTCTTCCTTTCTCC
TCCCGTCTCCTGCTTCACCTCCTTGCGGCATTAGAATACCTGCTCCGCTT
CCTGCCTTCCTGGCCCCGTGGTCCTCCCTTTCCACCGCTACCGGCATCAA
AACTCCCCGCGCCCTTGTGCAGAAGGAGGATACTCTTCTGGAAGCTATTC
AGGGTCTTGACCGACGAGAGATCCAGAATAGCGCAGAGGCACGCGCACGC
GTCAAGAGCCTTATCGACGACCTGGAAGCTTCAAAGGGAATAAAGAAAGC
AACGGCCACCAAGGAAATCAATGGCAAATGGCGCTTGCTCTACACCTCCA
GCGATGGCACCGCCTCCCCCATTCAAAACACCTTTGTGGGCAGCAAGGCC
TTCGCCATCTACCAGGAAATCGACATCGCCCCCCCCTTGTCCTCTTCCTC
CTCCCCTTCCTCCCCCGCCACAGTCACCAACATCGTGGACTTCGGTGACT
CTATTGGTGCTCTTAACGTACAAGCATTGGCCAGCACACTCTTTCGACCC
ATCCCTGGCTTTGAGCCAAGGAAAGGGGACGGGAAATTCTTCGGCATCAA
CGTGCTGGGGGTGAGCAAGACGGAAGTGCCCCGCGACGGAGACCCAGCAG
ACCGTGAGTTTAAGGAAGGGAAGGAGGGAAGGAGGGAAGGAGGGAAAGAG
GGAAGGAGGGTTCTGTATGCTGTTCGATATATCTTTGCACCCATTAATTC
ACATATTCCTCTCTTTTCCGCACCAACCTTTCCTCAGGCATCGACTTCAA
GTTTGACAACGCTGGTTTTGACCTAGGCTTCCTCCCCTTCCGTGTGCCCT
ATCCAGTGCCCTTCCGTCTGCTAGGGGATGAAGTGAAAGGATGGTTGGAG
GTGACGTATCTCTCGCCGCGGCTGAGGTTGTCGCGGGGGAACAAGGGCAC
GATATTTGTACTGCAAAAGGTGGAGTGAGAGGAGCTCGGGTGCATGTGAC
GGGGTGGAACATATTTGTGCGGGGGATCGTACGTGTGCCAAAAATTGAAA
GAAGAAAGAATTAGGTATCTACGACACGACCAGAAGGTAGAAGGGAAAGC
GTGCAATTG back to topCoding sequence (CDS) from alignment at scaffold_21:470049..471207+ >mRNA_7838 ID=mRNA_7838|Name=jgi.p|Nanoce1779_2|600218|organism=Nannochloropsis oceanica|type=CDS|length=1716bp|location=Sequence derived from alignment at scaffold_21:470049..471207+ (Nannochloropsis oceanica)
ATGCTATACACTCTTATTCTTATGTTGGCCGTTTCCACCTCCTCTATTTC
GTCTTCCTTTCTCCTCCCGTCTCCTGCTTCACCTCCTTGCGGCATTAGAA
TACCTGCTCCGCTTCCTGCCTTCCTGGCCCCGTGGTCCTCCCTTTCCACC
GCTACCGGCATCAAAACTCCCCGCGCCCTTGTGCAGAAGGAGGATACTCT
TCTGGAAGCTATTCAGGGTCTTGACCGACGAGAGATCCAGAATAGCGCAG
AGGCACGCGCACGCGTCAAGAGCCTTATCGACGACCTGGAAGCTTCAAAG
GGAATAAAGAAAGCAACGGCCACCAAGGAAATCAATGGCAAATGGCGCTT
GCTCTACACCTCCAGCGATGGCACCGCCTCCCCCATTCAAAACACCTTTG
TGGGCAGCAAGGCCTTCGCCATCTACCAGGAAATCGACATCGCCCCCCCC
TTGTCCTCTTCCTCCTCCCCTTCCTCCCCCGCCACAGTCACCAACATCGT
GGACTTCGGTGACTCTATTGGTGCTCTTAACGTACAAGCATTGGCCAGCA
CACTCTTTCGACCCATCCCTGGCTTTGAGCCAAGGAAAGGGGACGGGAAA
TTCTTCGGCATCAACGTGCTGGGGGTGAGCAAGACGGAAGTGCCCCGCGA
CGGAGACCCAGCAGACCGCATCGACTTCAAGTTTGACAACGCTGGTTTTG
ACCTAGGCTTCCTCCCCTTCCGTGTGCCCTATCCAGTGCCCTTCCGTCTG
CTAGGGGATGAAGTGAAAGGATGGTTGGAGGTGACGTATCTCTCGCCGCG
GCTGAGGTTGTCGCGGGGGAACAAGGGCACGATATTTGTACTGCAAAAGG
TGGAGTGAATGCTATACACTCTTATTCTTATGTTGGCCGTTTCCACCTCC
TCTATTTCGTCTTCCTTTCTCCTCCCGTCTCCTGCTTCACCTCCTTGCGG
CATTAGAATACCTGCTCCGCTTCCTGCCTTCCTGGCCCCGTGGTCCTCCC
TTTCCACCGCTACCGGCATCAAAACTCCCCGCGCCCTTGTGCAGAAGGAG
GATACTCTTCTGGAAGCTATTCAGGGTCTTGACCGACGAGAGATCCAGAA
TAGCGCAGAGGCACGCGCACGCGTCAAGAGCCTTATCGACGACCTGGAAG
CTTCAAAGGGAATAAAGAAAGCAACGGCCACCAAGGAAATCAATGGCAAA
TGGCGCTTGCTCTACACCTCCAGCGATGGCACCGCCTCCCCCATTCAAAA
CACCTTTGTGGGCAGCAAGGCCTTCGCCATCTACCAGGAAATCGACATCG
CCCCCCCCTTGTCCTCTTCCTCCTCCCCTTCCTCCCCCGCCACAGTCACC
AACATCGTGGACTTCGGTGACTCTATTGGTGCTCTTAACGTACAAGCATT
GGCCAGCACACTCTTTCGACCCATCCCTGGCTTTGAGCCAAGGAAAGGGG
ACGGGAAATTCTTCGGCATCAACGTGCTGGGGGTGAGCAAGACGGAAGTG
CCCCGCGACGGAGACCCAGCAGACCGCATCGACTTCAAGTTTGACAACGC
TGGTTTTGACCTAGGCTTCCTCCCCTTCCGTGTGCCCTATCCAGTGCCCT
TCCGTCTGCTAGGGGATGAAGTGAAAGGATGGTTGGAGGTGACGTATCTC
TCGCCGCGGCTGAGGTTGTCGCGGGGGAACAAGGGCACGATATTTGTACT
GCAAAAGGTGGAGTGA back to top
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