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Properties
| Property Name | Value |
|---|
| TranscriptId | 141961 |
| Track | FilteredModels2 |
| ProteinId | 141875 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:423756..424898 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_783 ID=mRNA_783|Name=jgi.p|Nanoce1779_2|141875|organism=Nannochloropsis oceanica|type=mRNA|length=1074bp
CGGCAACATAACGGGGGGGGGGAAATGAAGGGATTTTTTGATTGATGGTT
TAATGAATTTCCACTTCTCTGATCTGCCTTGTTTCAATGGGGTCGAGCAG
AGGACCTCCAGAGAGGTATCCCGTTGAAGGGTGGATCTGTCTAAGGCCGT
TTTGGTCCATTCTGTGCCTCTCTTCTGACTCCTTTCTCTCGCCGTCACCT
TTACTCGCTCGCTCTACCTTGCATTGCGTGAGCGATAGGCACTGCCATTG
TGTTGTTTGTTGTTATGGTTGTGTTTTGGTCTGTTTGTTCGGTTGGCGTG
TCTCAAACGATTGGCGTGTCTCAAAAGCACCTCAATTCTTCATTCATTCC
GATGACTATCTGTCTCTTCTATTTTTCCAATTGTTCCATGCGCTCTGGCC
TTCTCGTTTTTTCCCTGACCTTTTTCTTCTCTCCATATCGCAGAATCGCT
ACTTTCTTATCGTACGCAATTGCAGTCTCGCCTTTCTAGCTAACACACAT
ACTCTGACGGCGCCCCATAATCGGAGGGATAGAAATCAGGGCCATGGTGG
CAAACCTATAGCCCGCAGAGGCTTCACAGGGAATTCGGTGTCTGAGGACA
AGGACGGTTTGCTCTCCGAAGATGATGTGAAAAGATTCCTTCCTTCTCGG
CTTGTAGGTACGGAGAAGGAGGTTATAGAGGCACTTGGTGGCTTGTGTAC
GAATCAATCCTGCACATGCCATTCCTATTCTTCGACGACCATTCCGCACT
CTATTCACCTTTCCCTCTCTCCATTTTTCCTGATTATGGTCCTCCACTTT
TCAAATATATTGATTTTTACCACTTATATCACTTTGTCTCATAAATATAC
ATACAATCTCTCGCTCTCACGACATCTCTCTCTTCTTTTTCTCCAAAAAC
TTGCTCGATGAGTGGGTGGGAAGATTTGATTCCAATAGAAAGACGAAAGC
ATGCTCCCAGCATTCAAAACGTGGCCTTCGTCTGGATCGTTCGTGCACGC
GCGACACAAGGACACAAGGTTGGCGTTTAGTGTAATTCAACCAACACTCT
ACCTCAGGTCCTTTCACATCTCTC back to topprotein sequence of jgi.p|Nanoce1779_2|141875 >mRNA_783-protein ID=mRNA_783-protein|Name=jgi.p|Nanoce1779_2|141875|organism=Nannochloropsis oceanica|type=polypeptide|length=275bp
MGSSRGPPERYPVEGWICLRPFWSILCLSSDSFLSPSPLLARSTLHCVSD
RHCHCVVCCYGCVLVCLFGWRVSNDWRVSKAPQFFIHSDDYLSLLFFQLF
HALWPSRFFPDLFLLSISQNRYFLIVRNCSLAFLANTHTLTAPHNRRDRN
QGHGGKPIARRGFTGNSVSEDKDGLLSEDDVKRFLPSRLVGTEKEVIEAL
GGLCTNQSCTCHSYSSTTIPHSIHLSLSPFFLIMVLHFSNILIFTTYITL
SHKYTYNLSLSRHLSLLFLQKLAR* back to topmRNA from alignment at scaffold_2:423756..424898+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_783 ID=mRNA_783|Name=jgi.p|Nanoce1779_2|141875|organism=Nannochloropsis oceanica|type=mRNA|length=1143bp|location=Sequence derived from alignment at scaffold_2:423756..424898+ (Nannochloropsis oceanica)
CGGCAACATAACGGGGGGGGGGAAATGAAGGGATTTTTTGATTGATGGTT
TAATGAATTTCCACTTCTCTGATCTGCCTTGTTTCAATGGGGTCGAGCAG
AGGACCTCCAGAGAGGTATCCCGTTGAAGGGTGGATCTGTCTAAGGCCGT
TTTGGTCCATTCTGTGCCTCTCTTCTGACTCCTTTCTCTCGCCGTCACCT
TTACTCGCTCGCTCTACCTTGCATTGCGTGAGCGATAGGCACTGCCATTG
TGTTGTTTGTTGTTATGGTTGTGTTTTGGTCTGTTTGTTCGGTTGGCGTG
TCTCAAACGATTGGCGTGTCTCAAAAGCACCTCAATTCTTCATTCATTCC
GATGACTATCTGTCTCTTCTATTTTTCCAATTGTTCCATGCGCTCTGGCC
TTCTCGTTTTTTCCCTGACCTTTTTCTTCTCTCCATATCGCAGAATCGCT
ACTTTCTTATCGTACGCAATTGCAGTCTCGCCTTTCTAGCTAACACACAT
ACTCTGACGGCGCCCCATAATCGGAGGGATAGAAAGTAGGTGTATCGTTG
GTGTGGTGTGATTGCACTCTGCCTTGATAAAAATTGACACAATTCAACAA
GCAGTCAGGGCCATGGTGGCAAACCTATAGCCCGCAGAGGCTTCACAGGG
AATTCGGTGTCTGAGGACAAGGACGGTTTGCTCTCCGAAGATGATGTGAA
AAGATTCCTTCCTTCTCGGCTTGTAGGTACGGAGAAGGAGGTTATAGAGG
CACTTGGTGGCTTGTGTACGAATCAATCCTGCACATGCCATTCCTATTCT
TCGACGACCATTCCGCACTCTATTCACCTTTCCCTCTCTCCATTTTTCCT
GATTATGGTCCTCCACTTTTCAAATATATTGATTTTTACCACTTATATCA
CTTTGTCTCATAAATATACATACAATCTCTCGCTCTCACGACATCTCTCT
CTTCTTTTTCTCCAAAAACTTGCTCGATGAGTGGGTGGGAAGATTTGATT
CCAATAGAAAGACGAAAGCATGCTCCCAGCATTCAAAACGTGGCCTTCGT
CTGGATCGTTCGTGCACGCGCGACACAAGGACACAAGGTTGGCGTTTAGT
GTAATTCAACCAACACTCTACCTCAGGTCCTTTCACATCTCTC back to topCoding sequence (CDS) from alignment at scaffold_2:423756..424898+ >mRNA_783 ID=mRNA_783|Name=jgi.p|Nanoce1779_2|141875|organism=Nannochloropsis oceanica|type=CDS|length=1650bp|location=Sequence derived from alignment at scaffold_2:423756..424898+ (Nannochloropsis oceanica)
ATGGGGTCGAGCAGAGGACCTCCAGAGAGGTATCCCGTTGAAGGGTGGAT
CTGTCTAAGGCCGTTTTGGTCCATTCTGTGCCTCTCTTCTGACTCCTTTC
TCTCGCCGTCACCTTTACTCGCTCGCTCTACCTTGCATTGCGTGAGCGAT
AGGCACTGCCATTGTGTTGTTTGTTGTTATGGTTGTGTTTTGGTCTGTTT
GTTCGGTTGGCGTGTCTCAAACGATTGGCGTGTCTCAAAAGCACCTCAAT
TCTTCATTCATTCCGATGACTATCTGTCTCTTCTATTTTTCCAATTGTTC
CATGCGCTCTGGCCTTCTCGTTTTTTCCCTGACCTTTTTCTTCTCTCCAT
ATCGCAGAATCGCTACTTTCTTATCGTACGCAATTGCAGTCTCGCCTTTC
TAGCTAACACACATACTCTGACGGCGCCCCATAATCGGAGGGATAGAAAT
CAGGGCCATGGTGGCAAACCTATAGCCCGCAGAGGCTTCACAGGGAATTC
GGTGTCTGAGGACAAGGACGGTTTGCTCTCCGAAGATGATGTGAAAAGAT
TCCTTCCTTCTCGGCTTGTAGGTACGGAGAAGGAGGTTATAGAGGCACTT
GGTGGCTTGTGTACGAATCAATCCTGCACATGCCATTCCTATTCTTCGAC
GACCATTCCGCACTCTATTCACCTTTCCCTCTCTCCATTTTTCCTGATTA
TGGTCCTCCACTTTTCAAATATATTGATTTTTACCACTTATATCACTTTG
TCTCATAAATATACATACAATCTCTCGCTCTCACGACATCTCTCTCTTCT
TTTTCTCCAAAAACTTGCTCGATGAATGGGGTCGAGCAGAGGACCTCCAG
AGAGGTATCCCGTTGAAGGGTGGATCTGTCTAAGGCCGTTTTGGTCCATT
CTGTGCCTCTCTTCTGACTCCTTTCTCTCGCCGTCACCTTTACTCGCTCG
CTCTACCTTGCATTGCGTGAGCGATAGGCACTGCCATTGTGTTGTTTGTT
GTTATGGTTGTGTTTTGGTCTGTTTGTTCGGTTGGCGTGTCTCAAACGAT
TGGCGTGTCTCAAAAGCACCTCAATTCTTCATTCATTCCGATGACTATCT
GTCTCTTCTATTTTTCCAATTGTTCCATGCGCTCTGGCCTTCTCGTTTTT
TCCCTGACCTTTTTCTTCTCTCCATATCGCAGAATCGCTACTTTCTTATC
GTACGCAATTGCAGTCTCGCCTTTCTAGCTAACACACATACTCTGACGGC
GCCCCATAATCGGAGGGATAGAAATCAGGGCCATGGTGGCAAACCTATAG
CCCGCAGAGGCTTCACAGGGAATTCGGTGTCTGAGGACAAGGACGGTTTG
CTCTCCGAAGATGATGTGAAAAGATTCCTTCCTTCTCGGCTTGTAGGTAC
GGAGAAGGAGGTTATAGAGGCACTTGGTGGCTTGTGTACGAATCAATCCT
GCACATGCCATTCCTATTCTTCGACGACCATTCCGCACTCTATTCACCTT
TCCCTCTCTCCATTTTTCCTGATTATGGTCCTCCACTTTTCAAATATATT
GATTTTTACCACTTATATCACTTTGTCTCATAAATATACATACAATCTCT
CGCTCTCACGACATCTCTCTCTTCTTTTTCTCCAAAAACTTGCTCGATGA back to top
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