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Properties
| Property Name | Value |
|---|
| TranscriptId | 168918 |
| Track | FilteredModels2 |
| ProteinId | 168832 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_21 | supercontig | scaffold_21:347879..350445 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7795 ID=mRNA_7795|Name=jgi.p|Nanoce1779_2|168832|organism=Nannochloropsis oceanica|type=mRNA|length=1216bp
CCGCGAGAGACGGAGTGTGTGAATGTTCAGCTTTCCGATGTTTTCTCATG
CTCTGGCCCTCCAAACCACCCACAAGCAGCAGCAGAGCGGCGACCAAGTC
GAGGAGGAGCTGTAGGAATCTACCATGGCTGCAGGGAGGGCGACGAATGT
TGTTTTCATCGGGAACTTGGCATGGAGCACGTCGGAAGAGAACCTGCGGG
CTTTCGCCTCCTCAGTGGGACCTGTCCTCTCTGTGCAAATTCAGGCACAT
GCCGACACGGGCCGCTCCAAGGGATGGGGGCTAATACGCTACAGCTCCCC
GGAAGTGGCCGCGCGTGCGATCGAGGTCCTGAATGGACAGGAGCTGGACA
ACCGCAAGCTGCACGTTCGCGAGGACCGCTCTCATCTTGATTCGGCGGAG
GGTGTGGTGGTGTTTGTCGGGAATCTGCCGTGGTCCGTGACGAGCGAATC
CCTGACTGATCTCTTCAAAGAGTACGACCCGGTCGACGTCCACGTCAAGA
CGAATATGGCGGGGAGGAGCAGGGGTTTCGCCCTGGTGAAGTTTACAGAC
ACCGAGGTCGCAGATCTGGCAATCGCTAATCTCAATGGGTATGAGCTGGA
GGGACGGCTCATCCAGGTCCGCTTTGATAGGCAACAGGGCGAGGGAGGGG
AGGGTGGAGCTGGGGCTGACGCGAACGGGGGAGGGGTGGGGGGGTTGACC
GACCGTGTGACGGTGACGAACTTGGCGTGGACCACGGAGGAGGCGGAGTT
GGTGGCGCTGCTGTCAAAGGCAGGCACCGTGGTGAACGTGGAGATACAGC
GGCATGCGGACTCGGGGCGAAGCAAGGGATGGGCGATTGCCACGTTTGGG
AGTCGGGATGAGGCGTTGAATGCGATCAACACGCTGAATAAAACGGTGCT
TCGGGAGAGGTCTATTTCGATGAAGTTCTACAGCACTACTGGTGGTCGTC
GGAATTGAGTAGGGAGGGAGACGTGGACCGGCAAAGCTGAGGCAGTGGGC
AGAGAGCGATTCGTGTGGGTGTGAGAGGGAGAGCGAGTGAGGAAGCTGTT
TGACTCATCTTCTTTTGCGCGCCAGCGGTGATTGTAATGGCTGCTATTCC
TGTGGTGGTCGCTTTTACTGCTGCCGCTCCTGAGAGAATTGGACGTGATA
CCATCGGTCTATGCCACGAGCGAGAACGAGAAGGGAATAAATTACAACCC
CCGACCCGCTCGTCTG back to topprotein sequence of jgi.p|Nanoce1779_2|168832 >mRNA_7795-protein ID=mRNA_7795-protein|Name=jgi.p|Nanoce1779_2|168832|organism=Nannochloropsis oceanica|type=polypeptide|length=278bp
MAAGRATNVVFIGNLAWSTSEENLRAFASSVGPVLSVQIQAHADTGRSKG
WGLIRYSSPEVAARAIEVLNGQELDNRKLHVREDRSHLDSAEGVVVFVGN
LPWSVTSESLTDLFKEYDPVDVHVKTNMAGRSRGFALVKFTDTEVADLAI
ANLNGYELEGRLIQVRFDRQQGEGGEGGAGADANGGGVGGLTDRVTVTNL
AWTTEEAELVALLSKAGTVVNVEIQRHADSGRSKGWAIATFGSRDEALNA
INTLNKTVLRERSISMKFYSTTGGRRN* back to topmRNA from alignment at scaffold_21:347879..350445- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7795 ID=mRNA_7795|Name=jgi.p|Nanoce1779_2|168832|organism=Nannochloropsis oceanica|type=mRNA|length=2567bp|location=Sequence derived from alignment at scaffold_21:347879..350445- (Nannochloropsis oceanica)
CCGCGAGAGACGGAGTGTGTGAATGTTCAGCTTTCCGATGTTTTCTCATG
CTCTGGCCCTCCAAACCACCCACAAGCAGCAGCAGAGCGGCGACCAAGTC
GAGGAGGAGCTGTAGGAATCTACCATGGCTGGTAAGTGGGTGGATGGGCG
TGGGCGCTGGGATTGGCGGGGTTTTGTCCTCTTAGAAGATGGAGAAGAGC
GCTTACTGAAGGCAGCACGCCTGGTGCGTGTACCGTCAGATGACAACTGC
CGCCTCTCGAGTCGCGCGGGTCGGGGTCACGGGGCATGATACGCAAGGTT
GCATGGGGTGTCGTACTTGGCCGGCCCAAAGCGGGGGAAAACGAGCGGCT
GAGAGATACGCGGGCGTGGACGGGTGTAGTTTTCCGAGGATCGTCCTCTT
GATATGCACGCTGGGTTGCTCGTCTTTGTATATCACATAGCACTGGTCGC
CACCACTCTCACAACCACCACACTGACACGTCCAAAACAAAAACTTATCC
GTCTACTCGACATCAGCAGCAGGGAGGGCGACGAATGTTGTTTTCATCGG
GAACTTGGCATGGAGCACGTCGGAAGAGAACCTGCGGGCTTTCGCCTCCT
CAGTGGGACCTGTCCTCTCTGTGCAAATTCAGGCACATGCCGACACGGGC
CGCTCCAAGGGATGGGGGTGAGTAAGAGAGTCGGTGGGCGTGCTGGGGGT
ATGCTGACGGCATGCTTCCATTATAGTCATATATACACCATACCTACTCT
TGTCAGTAGTATGCTTGGGCAGTCATATTAAGACGAGTGCGTCCGCATCG
AGCTTTTGAACTCGGTATTCCTAGTCATGTGCTCTCAAATTTCTGGGGAA
AACCATCGTGCAAGGGGTGCTTGCCTTCTGTATTCGCTCCCTCCCTTCCT
CCAGCCAATCCCTCATTTCTTTGATTTTGTTTGCATCTCCTGTCACGTTT
GCTTGTCAGCTCTCCCTATTTTCCCCATCTAGATCCTGCTGCACCTGCCT
GACTTTCTGAGGTACATCTACATGTCTCCGGACTATGCCGACATGTCTGA
TGCACGTTCCCTTTCTTTACCCCCCTTCCCCTACCTTCTTTCCTGTCGCA
GCCAAATCTGCAACAGCTCCCCGAAATGACCTTCCGTGCGGTCGAAGCTC
TAAATGATAAAGGGATAGACAAGCGCAAACACAGGAAGATCACTCTCACC
CTCCCTCTGTCCTTCCATCCGTCCCTCCCCTTCCTCAGGCTAATACGCTA
CAGCTCCCCGGAAGTGGCCGCGCGTGCGATCGAGGTCCTGAATGGACAGG
AGCTGGACAACCGCAAGCTGCACGTTCGCGAGGACCGCTCTCATCTTGAT
TCGGCGGAGGGTGTGGTGGTGTTTGTCGGGAATCTGCCGTGGTCCGTGAC
GAGCGAATCCCTGACTGATCTCTTCAAAGAGTACGACCCGGTCGACGTCC
ACGTCAAGACGAATATGGCGGGGAGGAGCAGGTAGGAAGAGACAGACGGA
GACACGCTGACCGTGGTGGAAATTCTCACATGTCTCAACGGCCATCCAAC
GGCCATCAGATGACGCCGTTACCCTCCCTCACGGTCCCCTTCCTCTCTTG
TCCCCTCCTTCCTTCCTTCCTCCCTCCCTCACAGGGGTTTCGCCCTGGTG
AAGTTTACAGACACCGAGGTCGCAGATCTGGCAATCGCTAATCTCAATGG
GTATGAGCTGGAGGGACGGCTCATCCAGGTCCGCTTTGATAGGCAACAGG
GCGAGGGAGGGGAGGGTGGAGCTGGGGCTGACGCGAACGGGGGAGGGGTG
GGGGGGTTGACCGACCGTGTGACGGTGACGAACTTGGCGTGGACCACGGA
GGAGGCGGAGTTGGTGGCGCTGCTGTCAAAGGCAGGCACCGTGGTGAACG
TGGAGATACAGCGGCATGCGGACTCGGGGCGAAGCAAGGGATGGGCGATT
GCCACGTTTGGGAGTCGGGATGAGGCGTTGAATGCGATCAACACGCTGAA
TAAAACGGTGCTTCGGGAGAGGTCTATTTCGATGAAGTTCTACAGCACTA
CTGGTGGTCGTCGGAATTGAGTAGGTGCCCCTCCTTCCTTTGCTCCTGGC
AGGGGCTGGGGGGGGTACGGAGGAAGGAGGGGGGGGGGAAGAGGGCGGGG
AAGGGGGCGGGGGAGGGGATGGTGATCGTGATGTTTTTGTGGCAGCGTGA
GAATTGAGGGATGAATTTTGCTTGCTTGGAGTTGATGGAGCAGAGGGAGA
GGAATGAAATATGCTCTTTTGAATCTCTGCTCTTTTCTCCAAGGACATGG
AGAAGGGAAGAAGGGAGGGAGACGTGGACCGGCAAAGCTGAGGCAGTGGG
CAGAGAGCGATTCGTGTGGGTGTGAGAGGGAGAGCGAGTGAGGAAGCTGT
TTGACTCATCTTCTTTTGCGCGCCAGCGGTGATTGTAATGGCTGCTATTC
CTGTGGTGGTCGCTTTTACTGCTGCCGCTCCTGAGAGAATTGGACGTGAT
ACCATCGGTCTATGCCACGAGCGAGAACGAGAAGGGAATAAATTACAACC
CCCGACCCGCTCGTCTG back to topCoding sequence (CDS) from alignment at scaffold_21:347879..350445- >mRNA_7795 ID=mRNA_7795|Name=jgi.p|Nanoce1779_2|168832|organism=Nannochloropsis oceanica|type=CDS|length=3336bp|location=Sequence derived from alignment at scaffold_21:347879..350445- (Nannochloropsis oceanica)
GGGTTTCGCCCTGGTGAAGTTTACAGACACCGAGGTCGCAGATCTGGCAA
TCGCTAATCTCAATGGGTATGAGCTGGAGGGACGGCTCATCCAGGTCCGC
TTTGATAGGCAACAGGGCGAGGGAGGGGAGGGTGGAGCTGGGGCTGACGC
GAACGGGGGAGGGGTGGGGGGGTTGACCGACCGTGTGACGGTGACGAACT
TGGCGTGGACCACGGAGGAGGCGGAGTTGGTGGCGCTGCTGTCAAAGGCA
GGCACCGTGGTGAACGTGGAGATACAGCGGCATGCGGACTCGGGGCGAAG
CAAGGGATGGGCGATTGCCACGTTTGGGAGTCGGGATGAGGCGTTGAATG
CGATCAACACGCTGAATAAAACGGTGCTTCGGGAGAGGTCTATTTCGATG
AAGTTCTACAGCACTACTGGTGGTCGTCGGAATTGAGCTAATACGCTACA
GCTCCCCGGAAGTGGCCGCGCGTGCGATCGAGGTCCTGAATGGACAGGAG
CTGGACAACCGCAAGCTGCACGTTCGCGAGGACCGCTCTCATCTTGATTC
GGCGGAGGGTGTGGTGGTGTTTGTCGGGAATCTGCCGTGGTCCGTGACGA
GCGAATCCCTGACTGATCTCTTCAAAGAGTACGACCCGGTCGACGTCCAC
GTCAAGACGAATATGGCGGGGAGGAGCAGCAGGGAGGGCGACGAATGTTG
TTTTCATCGGGAACTTGGCATGGAGCACGTCGGAAGAGAACCTGCGGGCT
TTCGCCTCCTCAGTGGGACCTGTCCTCTCTGTGCAAATTCAGGCACATGC
CGACACGGGCCGCTCCAAGGGATGGGGATGGCTGGGGTTTCGCCCTGGTG
AAGTTTACAGACACCGAGGTCGCAGATCTGGCAATCGCTAATCTCAATGG
GTATGAGCTGGAGGGACGGCTCATCCAGGTCCGCTTTGATAGGCAACAGG
GCGAGGGAGGGGAGGGTGGAGCTGGGGCTGACGCGAACGGGGGAGGGGTG
GGGGGGTTGACCGACCGTGTGACGGTGACGAACTTGGCGTGGACCACGGA
GGAGGCGGAGTTGGTGGCGCTGCTGTCAAAGGCAGGCACCGTGGTGAACG
TGGAGATACAGCGGCATGCGGACTCGGGGCGAAGCAAGGGATGGGCGATT
GCCACGTTTGGGAGTCGGGATGAGGCGTTGAATGCGATCAACACGCTGAA
TAAAACGGTGCTTCGGGAGAGGTCTATTTCGATGAAGTTCTACAGCACTA
CTGGTGGTCGTCGGAATTGAGCTAATACGCTACAGCTCCCCGGAAGTGGC
CGCGCGTGCGATCGAGGTCCTGAATGGACAGGAGCTGGACAACCGCAAGC
TGCACGTTCGCGAGGACCGCTCTCATCTTGATTCGGCGGAGGGTGTGGTG
GTGTTTGTCGGGAATCTGCCGTGGTCCGTGACGAGCGAATCCCTGACTGA
TCTCTTCAAAGAGTACGACCCGGTCGACGTCCACGTCAAGACGAATATGG
CGGGGAGGAGCAGCAGGGAGGGCGACGAATGTTGTTTTCATCGGGAACTT
GGCATGGAGCACGTCGGAAGAGAACCTGCGGGCTTTCGCCTCCTCAGTGG
GACCTGTCCTCTCTGTGCAAATTCAGGCACATGCCGACACGGGCCGCTCC
AAGGGATGGGGATGGCTGGGGTTTCGCCCTGGTGAAGTTTACAGACACCG
AGGTCGCAGATCTGGCAATCGCTAATCTCAATGGGTATGAGCTGGAGGGA
CGGCTCATCCAGGTCCGCTTTGATAGGCAACAGGGCGAGGGAGGGGAGGG
TGGAGCTGGGGCTGACGCGAACGGGGGAGGGGTGGGGGGGTTGACCGACC
GTGTGACGGTGACGAACTTGGCGTGGACCACGGAGGAGGCGGAGTTGGTG
GCGCTGCTGTCAAAGGCAGGCACCGTGGTGAACGTGGAGATACAGCGGCA
TGCGGACTCGGGGCGAAGCAAGGGATGGGCGATTGCCACGTTTGGGAGTC
GGGATGAGGCGTTGAATGCGATCAACACGCTGAATAAAACGGTGCTTCGG
GAGAGGTCTATTTCGATGAAGTTCTACAGCACTACTGGTGGTCGTCGGAA
TTGAGCTAATACGCTACAGCTCCCCGGAAGTGGCCGCGCGTGCGATCGAG
GTCCTGAATGGACAGGAGCTGGACAACCGCAAGCTGCACGTTCGCGAGGA
CCGCTCTCATCTTGATTCGGCGGAGGGTGTGGTGGTGTTTGTCGGGAATC
TGCCGTGGTCCGTGACGAGCGAATCCCTGACTGATCTCTTCAAAGAGTAC
GACCCGGTCGACGTCCACGTCAAGACGAATATGGCGGGGAGGAGCAGCAG
GGAGGGCGACGAATGTTGTTTTCATCGGGAACTTGGCATGGAGCACGTCG
GAAGAGAACCTGCGGGCTTTCGCCTCCTCAGTGGGACCTGTCCTCTCTGT
GCAAATTCAGGCACATGCCGACACGGGCCGCTCCAAGGGATGGGGATGGC
TGGGGTTTCGCCCTGGTGAAGTTTACAGACACCGAGGTCGCAGATCTGGC
AATCGCTAATCTCAATGGGTATGAGCTGGAGGGACGGCTCATCCAGGTCC
GCTTTGATAGGCAACAGGGCGAGGGAGGGGAGGGTGGAGCTGGGGCTGAC
GCGAACGGGGGAGGGGTGGGGGGGTTGACCGACCGTGTGACGGTGACGAA
CTTGGCGTGGACCACGGAGGAGGCGGAGTTGGTGGCGCTGCTGTCAAAGG
CAGGCACCGTGGTGAACGTGGAGATACAGCGGCATGCGGACTCGGGGCGA
AGCAAGGGATGGGCGATTGCCACGTTTGGGAGTCGGGATGAGGCGTTGAA
TGCGATCAACACGCTGAATAAAACGGTGCTTCGGGAGAGGTCTATTTCGA
TGAAGTTCTACAGCACTACTGGTGGTCGTCGGAATTGAGCTAATACGCTA
CAGCTCCCCGGAAGTGGCCGCGCGTGCGATCGAGGTCCTGAATGGACAGG
AGCTGGACAACCGCAAGCTGCACGTTCGCGAGGACCGCTCTCATCTTGAT
TCGGCGGAGGGTGTGGTGGTGTTTGTCGGGAATCTGCCGTGGTCCGTGAC
GAGCGAATCCCTGACTGATCTCTTCAAAGAGTACGACCCGGTCGACGTCC
ACGTCAAGACGAATATGGCGGGGAGGAGCAGCAGGGAGGGCGACGAATGT
TGTTTTCATCGGGAACTTGGCATGGAGCACGTCGGAAGAGAACCTGCGGG
CTTTCGCCTCCTCAGTGGGACCTGTCCTCTCTGTGCAAATTCAGGCACAT
GCCGACACGGGCCGCTCCAAGGGATGGGGATGGCTG back to top
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