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Properties
| Property Name | Value |
|---|
| TranscriptId | 574180 |
| Track | FilteredModels2 |
| ProteinId | 574094 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:409354..411964 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_777 ID=mRNA_777|Name=jgi.p|Nanoce1779_2|574094|organism=Nannochloropsis oceanica|type=mRNA|length=2061bp
ACAGGTTGACGTACCCGGCCAAACAGCAACTTGGAGGTCCGGCCACCCCC
CGCCACCTAAGAGAACGCTTGCGGCTGTCATCTTTTCCCCCCTCTTTCCC
ACCACCACCACCACCATCACCACACACACACGATGAGACTACTAGTACTC
GGCCTCGTCTCTTTGGGCGTCACGGGCTTCGCCCACACCCACCCTCGCCT
TCTCAAGACACCTGGCGCTGGCATCAAAGCCCGCACTTGCTTCGCCGAAC
CCCCCTCCGCTTCCTCCACCACCTCACGTGCTTTAGCACTCTGCCCCCGG
AACGCTGCTAGCCTCCCGACCGCTGCCCCGGTCGAGGCCGCCGTCATCTA
CAATCTGCAGCCTACCCCCATCGTTTCTCCCCGCTTTCTGATTTCTACTC
GTGGCGGTGCCTCCACAGCAGCCAAGCCCGCCACCTCCACGCTTAAAGTT
GGCTCTTTTTTTTTCTTATGGTATTTGTTCAATATTGGCTACAACATCTA
CAACAAGAAGGCCCTGAATGTGCTTCCCCTCCCCTGGACCGTTGGCCTCA
TTCAGCTTTCCCTCGGCCTGCTGTATGTCTTTCCCTTGTGGGCACTCGGC
ATCCGCAAAGCCCCTAAGCTGACGGTACAGAATGTGAAGAACCTCTTGCC
CGTCGCCTTAATGCACGCCATGGCCCACATCAGTGCGGTCATTTCTCTTG
GGGCCGGCGCCGTCTCCTTCACCCATATAATTAAAGCTGCTGAGCCCGCG
TTCACCTCCTTGTTTTCCGCCTTGTTTCTCAAGCAATTCTTCGCACCTGT
CGTGTATGCGTCTTTGATCCCTGTGATGGGTGGGGTGGCGATTGCCTCTT
TAACTGAGAGGAAATTCAGTTGGCTGGCGTTCAACTCTGCGATGCTTGCA
AATACAGCCTCGGCTGGACGAGGGATTTTTGCCAAGAAGACCATGAAGGA
GCCACAGGGCCAGAACATGGATGCGGCGAATCTATATGCCGTCCTCACGA
TCCTGGCGACGTTGATTATGGCGCCTGCGGCGGTGTTGGTGGAGGGGAGT
AAGGTGAGGGGGGCGTGGCAGGCGGCCTTGGCAGTGACAAGCCAGAAGCA
GTTGATCAATTATATCATCTCGAGTGGGTTATACTTTTACTTGTACAATG
AAGTGGCGTTCTTGGCCTTAGATAGCGTGCACCCTGTGACGCACGCGGTC
GGGAACACGATCAAGCGTGTCGTGATTATAGGCGCGTCAATTCTGGTGTT
TAAGAATCCGGTGACCATGCAGGGGTATATTGGTTCTGCGGTTGCTATTG
CTGGTGTGCTTCTCTACTCCTTAGCTGTGGAAAAGACCAAGAAGCGGGCG
TGAGTCGAAGGGAGAACAGCAAAAGACAGATAGTCACATCTTCCTTTTCC
CATCTCCCCCGCGGGCAAAGCAAAAGACAGAAGGTTGCCCCCGTTCTTTG
AGAGAGGTGATCACGTGAGACATTGTTTTGTTTCATTTTTCCTCCACCTT
CTCTCTCGTTTGTTCGAGAATTTCGGTGTGGCATATATGTTTGTGCGTGG
TGTGAATGTTGTACCGTGATAACGACGACGACAACGTCTGTGTGAGTCTT
TGCGAGTCTGTGTCTCTCTCTCTTTGTCCTAGATATGCGTGTAATTTCAT
GTGTACGTGTGTGCGTCATTTATTTCGCACGTATAGGTCATATATGTGCG
ATCATGCATGCGCGCGCGCGCGTGTGCCATGCATGATCTTGCTTGGTCTT
ATTTTGCCCGGTGAGATGGAATATAACAAAAGGGTGGTGTCATGTGTGTT
TTGGCGCCATTATCAAGCCAAAATAAAAAAGCAACTGCAGCAGCAGTAGC
AGCAGCAATAGGAACAGCATGAAGGGGTGAGATGGAAGAAAGGCCGGGTG
TGGAGGAGTGGGTAACGATGGTACGAAGCGAAAGGCCTTAGATAAGAGAA
TGAGAGCCAAGACGCCAAGCACAATAAAAAGGAAAAGGACGACGAAAATC
AAAAGCAGCTTGAAAAGGCTTTACATATCTCAATCCTCATGTCATCATCA
CCAGCCATCTC back to topprotein sequence of jgi.p|Nanoce1779_2|574094 >mRNA_777-protein ID=mRNA_777-protein|Name=jgi.p|Nanoce1779_2|574094|organism=Nannochloropsis oceanica|type=polypeptide|length=407bp
MRLLVLGLVSLGVTGFAHTHPRLLKTPGAGIKARTCFAEPPSASSTTSRA
LALCPRNAASLPTAAPVEAAVIYNLQPTPIVSPRFLISTRGGASTAAKPA
TSTLKVGSFFFLWYLFNIGYNIYNKKALNVLPLPWTVGLIQLSLGLLYVF
PLWALGIRKAPKLTVQNVKNLLPVALMHAMAHISAVISLGAGAVSFTHII
KAAEPAFTSLFSALFLKQFFAPVVYASLIPVMGGVAIASLTERKFSWLAF
NSAMLANTASAGRGIFAKKTMKEPQGQNMDAANLYAVLTILATLIMAPAA
VLVEGSKVRGAWQAALAVTSQKQLINYIISSGLYFYLYNEVAFLALDSVH
PVTHAVGNTIKRVVIIGASILVFKNPVTMQGYIGSAVAIAGVLLYSLAVE
KTKKRA* back to topmRNA from alignment at scaffold_2:409354..411964- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_777 ID=mRNA_777|Name=jgi.p|Nanoce1779_2|574094|organism=Nannochloropsis oceanica|type=mRNA|length=2611bp|location=Sequence derived from alignment at scaffold_2:409354..411964- (Nannochloropsis oceanica)
ACAGGTTGACGTACCCGGCCAAACAGCAACTTGGAGGTCCGGCCACCCCC
CGCCACCTAAGAGAACGCTTGCGGCTGTCATCTTTTCCCCCCTCTTTCCC
ACCACCACCACCACCATCACCACACACACACGATGAGACTACTAGTACTC
GGCCTCGTCTCTTTGGGCGTCACGGGCTTCGCCCACACCCACCCTCGCCT
TCTCAAGACACCTGGCGCTGGCATCAAAGGTGAGGAATTCATTGACCCTC
CCTATGCTCTTTATTCGGCAACCGTAATGCTGCGGAGTTGTTGGCATCCC
CTCGATACATTTTGCTATACGTCCCTCTTCTAATGCGGTAGTTGTCAAAC
CACCTCTGCCACTGCAATGCTTCTGCTTGCCTTCCCTCCGATCCTTTGCC
TTGTGCGACGTCTCGGTCAATTTTTATCCAAACAACCCCGCAGTGTTGCC
CATGCACCCTTTGGAGGCGAAAGTCCATCATCCCAATACTTCCATGTTAA
ATTTCATCGTCGAGTTCGTTCGTCTTTCATTTCACACCTGGTACAGTCAC
ACTCACTCGTGTCTCTTTCACTGCTCTGGCGTACACTCTCCTTCTGGCCT
AGCCCTCCCAGCGCTTTCTATTGATATCGCAACTCTCTTATCCTCTCTCC
TTCCCTTCCTACCCTTTCTATCAACACAGCCCGCACTTGCTTCGCCGAAC
CCCCCTCCGCTTCCTCCACCACCTCACGTGCTTTAGCACTCTGCCCCCGG
AACGCTGCTAGCCTCCCGACCGCTGCCCCGGTCGAGGCCGCCGTCATCTA
CAATCTGCAGCCTACCCCCATCGTTTCTCCCCGCTTTCTGATTTCTACTC
GTGGCGGTGCCTCCACAGCAGCCAAGCCCGCCACCTCCACGCTTAAAGTT
GGCTCTTTTTTTTTCTTATGGTATTTGTTCAATATTGGCTACAACATCTA
CAACAAGAAGGCCCTGAATGTGCTTCCCCTCCCCTGGACCGTTGGCCTCA
TTCAGCTTTCCCTCGGCCTGCTGTATGTCTTTCCCTTGTGGGCACTCGGC
ATCCGCAAAGCCCCTAAGCTGACGGTACAGAATGTGAAGAACCTCTTGCC
CGTCGCCTTAATGCACGCCATGGCCCACATCAGTGCGGTCATTTCTCTTG
GGGCCGGCGCCGTCTCCTTCACCCATATAATTAAAGCTGCTGAGCCCGCG
TTCACCTCCTTGTTTTCCGCCTTGTTTCTCAAGCAATTCTTCGCACCTGT
CGTGTATGCGTCTTTGATCCCTGTGATGGGTGGGGTGGCGATTGCCTCTT
TAACTGAGAGGAAATTCAGTTGGCTGGCGTTCAACTCTGCGATGCTTGCA
AATACAGCCTCGGCTGGACGAGGGATTTTTGCCAAGAAGACCATGAAGGA
GCCACAGGGCCAGAACATGGATGCGGCGAATCTATATGCCGTCCTCACGA
TCCTGGCGACGTTGATTATGGCGCCTGCGGCGGTGTTGGTGGAGGGGAGT
AAGGTGAGGGGGGCGTGGCAGGCGGCCTTGGCAGTGACAAGCCAGAAGCA
GTTGATCAATTATATCATCTCGAGTGGGTTATACTTTTACTTGTACAATG
AAGTGGCGTTCTTGGCCTTAGATAGCGTGCACCCTGTGACGCACGCGGTC
GGGAACACGATCAAGCGTGTCGTGATTATAGGCGCGTCAATTCTGGTGTT
TAAGAATCCGGTGACCATGCAGGGGTATATTGGTTCTGCGGTTGCTATTG
CTGGTGTGCTTCTCTACTCCTTAGCTGTGGAAAAGACCAAGAAGCGGGCG
TGAGGCAAGTAAAGCACGAGTATTCAAAATCAGTTGAACAACTATGCGAA
TTAATCCCCTCTTTATTCCTCTTCCTCCTCCATTTTCTTCTCTCCCTCCC
TCAGTCGAAGGGAGAACAGCAAAAGACAGATAGTCACATCTTCCTTTTCC
CATCTCCCCCGCGGGCAAAGCAAAAGACAGAAGGTTGCCCCCGTTCTTTG
AGAGAGGTGATCACGTGAGACATTGTTTTGTTTCATTTTTCCTCCACCTT
CTCTCTCGTTTGTTCGAGAATTTCGGTGTGGCATATATGTTTGTGCGTGG
TGTGAATGTTGTACCGTGATAACGACGACGACAACGTCTGTGTGAGTCTT
TGCGAGTCTGTGTCTCTCTCTCTTTGTCCTAGATATGCGTGTAATTTCAT
GTGTACGTGTGTGCGTCATTTATTTCGCACGTATAGGTCATATATGTGCG
ATCATGCATGCGCGCGCGCGCGTGTGCCATGCATGATCTTGCTTGGTCTT
ATTTTGCCCGGTGAGATGGAATATAACAAAAGGGTGGTGTCATGTGTGTT
TTGGCGCCATTATCAAGCCAAAATAAAAAAGCAACTGCAGCAGCAGTAGC
AGCAGCAATAGGAACAGCATGAAGGGGTGAGATGGAAGAAAGGCCGGGTG
TGGAGGAGTGGGTAACGATGGTACGAAGCGAAAGGCCTTAGATAAGAGAA
TGAGAGCCAAGACGCCAAGCACAATAAAAAGGAAAAGGACGACGAAAATC
AAAAGCAGCTTGAAAAGGCTTTACATATCTCAATCCTCATGTCATCATCA
CCAGCCATCTC back to topCoding sequence (CDS) from alignment at scaffold_2:409354..411964- >mRNA_777 ID=mRNA_777|Name=jgi.p|Nanoce1779_2|574094|organism=Nannochloropsis oceanica|type=CDS|length=2442bp|location=Sequence derived from alignment at scaffold_2:409354..411964- (Nannochloropsis oceanica)
CCCGCACTTGCTTCGCCGAACCCCCCTCCGCTTCCTCCACCACCTCACGT
GCTTTAGCACTCTGCCCCCGGAACGCTGCTAGCCTCCCGACCGCTGCCCC
GGTCGAGGCCGCCGTCATCTACAATCTGCAGCCTACCCCCATCGTTTCTC
CCCGCTTTCTGATTTCTACTCGTGGCGGTGCCTCCACAGCAGCCAAGCCC
GCCACCTCCACGCTTAAAGTTGGCTCTTTTTTTTTCTTATGGTATTTGTT
CAATATTGGCTACAACATCTACAACAAGAAGGCCCTGAATGTGCTTCCCC
TCCCCTGGACCGTTGGCCTCATTCAGCTTTCCCTCGGCCTGCTGTATGTC
TTTCCCTTGTGGGCACTCGGCATCCGCAAAGCCCCTAAGCTGACGGTACA
GAATGTGAAGAACCTCTTGCCCGTCGCCTTAATGCACGCCATGGCCCACA
TCAGTGCGGTCATTTCTCTTGGGGCCGGCGCCGTCTCCTTCACCCATATA
ATTAAAGCTGCTGAGCCCGCGTTCACCTCCTTGTTTTCCGCCTTGTTTCT
CAAGCAATTCTTCGCACCTGTCGTGTATGCGTCTTTGATCCCTGTGATGG
GTGGGGTGGCGATTGCCTCTTTAACTGAGAGGAAATTCAGTTGGCTGGCG
TTCAACTCTGCGATGCTTGCAAATACAGCCTCGGCTGGACGAGGGATTTT
TGCCAAGAAGACCATGAAGGAGCCACAGGGCCAGAACATGGATGCGGCGA
ATCTATATGCCGTCCTCACGATCCTGGCGACGTTGATTATGGCGCCTGCG
GCGGTGTTGGTGGAGGGGAGTAAGGTGAGGGGGGCGTGGCAGGCGGCCTT
GGCAGTGACAAGCCAGAAGCAGTTGATCAATTATATCATCTCGAGTGGGT
TATACTTTTACTTGTACAATGAAGTGGCGTTCTTGGCCTTAGATAGCGTG
CACCCTGTGACGCACGCGGTCGGGAACACGATCAAGCGTGTCGTGATTAT
AGGCGCGTCAATTCTGGTGTTTAAGAATCCGGTGACCATGCAGGGGTATA
TTGGTTCTGCGGTTGCTATTGCTGGTGTGCTTCTCTACTCCTTAGCTGTG
GAAAAGACCAAGAAGCGGGCGTGAATGAGACTACTAGTACTCGGCCTCGT
CTCTTTGGGCGTCACGGGCTTCGCCCACACCCACCCTCGCCTTCTCAAGA
CACCTGGCGCTGGCATCAAAGCCCGCACTTGCTTCGCCGAACCCCCCTCC
GCTTCCTCCACCACCTCACGTGCTTTAGCACTCTGCCCCCGGAACGCTGC
TAGCCTCCCGACCGCTGCCCCGGTCGAGGCCGCCGTCATCTACAATCTGC
AGCCTACCCCCATCGTTTCTCCCCGCTTTCTGATTTCTACTCGTGGCGGT
GCCTCCACAGCAGCCAAGCCCGCCACCTCCACGCTTAAAGTTGGCTCTTT
TTTTTTCTTATGGTATTTGTTCAATATTGGCTACAACATCTACAACAAGA
AGGCCCTGAATGTGCTTCCCCTCCCCTGGACCGTTGGCCTCATTCAGCTT
TCCCTCGGCCTGCTGTATGTCTTTCCCTTGTGGGCACTCGGCATCCGCAA
AGCCCCTAAGCTGACGGTACAGAATGTGAAGAACCTCTTGCCCGTCGCCT
TAATGCACGCCATGGCCCACATCAGTGCGGTCATTTCTCTTGGGGCCGGC
GCCGTCTCCTTCACCCATATAATTAAAGCTGCTGAGCCCGCGTTCACCTC
CTTGTTTTCCGCCTTGTTTCTCAAGCAATTCTTCGCACCTGTCGTGTATG
CGTCTTTGATCCCTGTGATGGGTGGGGTGGCGATTGCCTCTTTAACTGAG
AGGAAATTCAGTTGGCTGGCGTTCAACTCTGCGATGCTTGCAAATACAGC
CTCGGCTGGACGAGGGATTTTTGCCAAGAAGACCATGAAGGAGCCACAGG
GCCAGAACATGGATGCGGCGAATCTATATGCCGTCCTCACGATCCTGGCG
ACGTTGATTATGGCGCCTGCGGCGGTGTTGGTGGAGGGGAGTAAGGTGAG
GGGGGCGTGGCAGGCGGCCTTGGCAGTGACAAGCCAGAAGCAGTTGATCA
ATTATATCATCTCGAGTGGGTTATACTTTTACTTGTACAATGAAGTGGCG
TTCTTGGCCTTAGATAGCGTGCACCCTGTGACGCACGCGGTCGGGAACAC
GATCAAGCGTGTCGTGATTATAGGCGCGTCAATTCTGGTGTTTAAGAATC
CGGTGACCATGCAGGGGTATATTGGTTCTGCGGTTGCTATTGCTGGTGTG
CTTCTCTACTCCTTAGCTGTGGAAAAGACCAAGAAGCGGGCGTGAATGAG
ACTACTAGTACTCGGCCTCGTCTCTTTGGGCGTCACGGGCTTCGCCCACA
CCCACCCTCGCCTTCTCAAGACACCTGGCGCTGGCATCAAAG back to top
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