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Properties
| Property Name | Value |
|---|
| TranscriptId | 632574 |
| Track | FilteredModels2 |
| ProteinId | 632488 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_21 | supercontig | scaffold_21:267208..269995 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7764 ID=mRNA_7764|Name=jgi.p|Nanoce1779_2|632488|organism=Nannochloropsis oceanica|type=mRNA|length=2156bp
CAGGCACAAATCTTACTAGATCATGAGTGCCGCGTCATCTTCCCTTGCCA
AGCGCAAGCGGGGTGTCGAGGGCAGCGAGCCGCCTCAACCTCGCCACCCC
CCTCCACGACGCCAGAGCCGCCGAAACGAGGCCAACAACAGCAACAATGT
GCCGTCTACGGCCGCATCTTTGGAGAGGATCCTCCCCTCAACAAGCAGTA
CCAATGCCCTTGAGTCGCCCGCGTTGCTTCCGCCCATCGACCCCCGTCCT
CCCATCCCCCAGGCTCCTACAGCCCTTCTTACTTCCATGGAGCGCCGCGC
CTTGGGACTGTCAGGGTTGCTCCTTGCTGCCTTTGTCGGCGACGCCGCCA
TGTTCGCCAAGGAAGTACATCGCGTATCGACCTTGTCGGTGTCCTGTCCG
TCCTCTTCCTCTTCCTTCGCGTCCACCGCCTGGGGCCGTCTAGACGCCCA
CGGTCGTTCCGTCCTCCATGCCGCCGCCTCCTCAGGGCATCCGACAATTC
TTCGACAAGTCCTTGCGGCCCAAGTTCTCGATATTGATACAGAGACCGAA
GGTGGATTGACGGCATTGTGCTATTCCTTGGACCGACGCGACGTGGCTGG
CGCCACCACCTTGCTTACCGCTGGGGCTGACCCCGGAAAAGTCGAAAAGA
TTTACGGATTGTGGGAGAGCGAGTGGGCAAGTGAGAAGATGGGCTTATTT
GGAACATCACGAGAGGATGCTTTAGCCATTTTAAAGCTTGCTTTGTGTGC
ATCGGTGGCACGGAGAAATGAACAGGCTCAGCCGTGGTTGGATGGAGAGA
CGCAGCTCTCGCTGTATGAGGAATGGAAAGCAAAGCTGAAAGTGGGGAGT
AGGGTCGATGCGCGGGATTGTGATTATCGATGGTATGAAGCGGAGGTAAT
TGGAGTGTTCCCTGGAGGGGTACGTGTGAGTTATCTAAGTTGGGGAAAGA
GGTTTGATGAGGACCTGGGCTTGGATAGCTTGAGGGTGTTACCTGCATAC
TCGGTAGTGCCGGCGTGGAGGGAGAGCCTGGGGGTGGGGAGCCAGGTAGA
AATTTTGGCGGCGGCGGCAACAGCAGTGGTGGCGCCCGAGACGGGCCAAG
GAGGGCCGGAGATTGCTGGTTGCCCCCTGCTGACAGCACGTCGAGAGCAG
GGTGCGCCGGAGCTCAACGTGCACCACCACAACCACCACCACAAGCGAGG
ATATGTAAAAAGGGCGAAGATTGATCGTCGTGGCAGCACTATGAGTAGCA
GGCGCGGTAAGAGTGGCCATAGTAGTGCGTTGACTATGGGCTACGCGGAA
AGGCGGGAGCGGGTGTTGAGCCATGTGGTGACTGAGTTGAATGAAGATTT
GTTTACGGACCTCTTGTTGGACTATTGGTGAAGGAGGGGAAAGAGTGAGA
AAAAAGAAAATTCATCAGAGAGGGAGAAAGACTGGCAGACGAGAAGAATG
ACTTTTAGTTAGTGTGTATCTTACTATAGTACAGGTGAAAAAGAGAGGGA
GAGCGCGCGGAAAGCATATGGAGTGTAGGTAAAGGATAGAGAGTGCGAGG
GAGGGCGAGAGGGAAGCCGGGTGACGGTATGGTGGTTCGCATATGTATGA
AGAGGACATATGTCTCTAACAAACAACAGTGTGTGTACGTGTTTATTTAA
TTAATAAATGGAGTATCACATAAAAGGCAAGTACTTCCCACATCCAACGG
AACACAAGAGAGAGATAAAAATCAGAAGTACTACAATGCCCCCATAAGCT
CATATCTAATCAAATAATGTAAGCCTGTAGGTAGGTCGGTAGTCCCACAC
ACTTCACAAACACATACTTACACATATATGCATGTTACACACATACAAGT
CAAGTGGCATAGTCAGCCAGAACGCCGAAAGTCAAAATGTCTGAAGGGAC
CCAGAAGTACGGCCCATGCATCAGCCCAGTGAGTCACTGACTTGTGAAAC
GGAATAATATTGGGGGGGACAAGAAATAACAGAAGACAGAAGATATCAAT
AAGCAACGTGTCACCACCATCACGACGGCTCTGCCTTCTGACTAGATGTG
ATGATAAACGCAATAAGACCCATGCCTCTGAAGCACATATACGATTCGTT
CATAGTACACAAACGTGAAAGAGAGGGGGGAAATAAGGAGGAAAAGGGAT
ATAGAT back to topprotein sequence of jgi.p|Nanoce1779_2|632488 >mRNA_7764-protein ID=mRNA_7764-protein|Name=jgi.p|Nanoce1779_2|632488|organism=Nannochloropsis oceanica|type=polypeptide|length=453bp
MSAASSSLAKRKRGVEGSEPPQPRHPPPRRQSRRNEANNSNNVPSTAASL
ERILPSTSSTNALESPALLPPIDPRPPIPQAPTALLTSMERRALGLSGLL
LAAFVGDAAMFAKEVHRVSTLSVSCPSSSSSFASTAWGRLDAHGRSVLHA
AASSGHPTILRQVLAAQVLDIDTETEGGLTALCYSLDRRDVAGATTLLTA
GADPGKVEKIYGLWESEWASEKMGLFGTSREDALAILKLALCASVARRNE
QAQPWLDGETQLSLYEEWKAKLKVGSRVDARDCDYRWYEAEVIGVFPGGV
RVSYLSWGKRFDEDLGLDSLRVLPAYSVVPAWRESLGVGSQVEILAAAAT
AVVAPETGQGGPEIAGCPLLTARREQGAPELNVHHHNHHHKRGYVKRAKI
DRRGSTMSSRRGKSGHSSALTMGYAERRERVLSHVVTELNEDLFTDLLLD
YW* back to topmRNA from alignment at scaffold_21:267208..269995- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7764 ID=mRNA_7764|Name=jgi.p|Nanoce1779_2|632488|organism=Nannochloropsis oceanica|type=mRNA|length=2788bp|location=Sequence derived from alignment at scaffold_21:267208..269995- (Nannochloropsis oceanica)
CAGGCACAAATCTTACTAGATCATGAGTGCCGCGTCATCTTCCCTTGCCA
AGCGCAAGCGGGGTGTCGAGGGCAGCGAGCCGCCTCAACCTCGCCACCCC
CCTCCACGACGCCAGAGCCGCCGAAACGAGGCCAACAACAGCAACAATGT
GCCGTCTACGGCCGCATCTTTGGAGAGGATCCTCCCCTCAACAAGCAGTA
CCAATGCCCTTGAGTCGCCCGCGTTGCTTCCGCCCATCGACCCCCGTCCT
CCCATCCCCCAGGCTCCTACAGCCCTTCTTACTTCCATGGAGCGCCGCGC
CTTGGGACTGTCAGGGTTGCTCCTTGCTGCCTTTGTCGGCGACGCCGCCA
TGTTCGCCAAGGAAGTACATCGCGTATCGACCTTGTCGGTGTCCTGTCCG
TCCTCTTCCTCTTCCTTCGCGTCCACCGCCTGGGGCCGTCTAGACGCCCA
CGGTCGTTCCGTCCTCCATGCCGCCGCCTCCTCAGGGCATCCGACAATTC
TTCGACAAGTCCTTGCGGCCCAAGTTCTCGATATTGATACAGAGACCGAA
GGTGGATTGACGGCATTGTGCTATTCCTTGGACCGACGCGACGTGGCTGG
CGCCACCACCTTGCTTACCGCTGGGGCTGACCCCGGAAAAGTCGAAAAGA
TTTACGGATTGTGGGAGAGCGAGTGGGCAAGTGAGAAGATGGGCTTATTT
GGAACATCACGAGAGGATGCTTTAGCCATTTTAAAGCTTGCTTTGTGTGC
ATCGGTGGCACGGAGAAATGAACAGGCTCAGCCGTGGTTGGATGGAGAGA
CGCAGCTCTCGCTGTATGAGGAATGGAAAGCAAAGCTGAAAGTGGGGAGT
AGGGTCGATGCGCGGGATTGTGATTATCGATGGTATGAAGCGGAGGTAAT
TGGAGTGTTCCCTGGAGGGGTACGTGTGAGTTATCTAAGTTGGGGAAAGA
GGTTTGATGAGGACCTGGGCTTGGATAGCTTGAGGGTGTTACCTGCATAC
TCGGTAGTGCCGGCGTGGAGGGAGAGCCTGGGGGTGGGGAGCCAGGTAGA
AATTTTGGCGGCGGCGGCAACAGCAGTGGTGGCGCCCGAGACGGGCCAAG
GAGGGCCGGAGATTGCTGGTGAGGAAGGGGGTGGGGTAGGAGGAGGGGAG
GGTGGGGGAGGAGGAGGAGGAGAGGGTGGGGGAGGAGGAGGAGGAGGAGG
AGGGGGGGGGAGGGGGGAGGGGGAGGAGGGTTGCTGTCCTCTCCGCCCCA
TGTCCGGTGGGAGGAGATGGAAAGGAAGTGGTGGGATGCCACGGCTCTAG
ATATTGATCGACGACGGCGCAGAATCCTCTTAAGTGTGGATGGTCGCCCT
AGCTTGTCTCGCTGGGTGGAGATCGATGGGAGGGAAATTGCTGATATATC
TACTCACGTCAAGCCCATCACTGGCGGTACCCTCGCTCCTCCCCCTCCTC
CCCCTCTTCTGCCCCCTCCTCCCCTGTCGCACCCACTCCTCGCTGGTGTT
GGTGCTGCGATTGATCCTGCTGCTGGTGTTGCTGGTGGCGGTGTGCTCGT
CCCTCTCCGGGGGGGCAAAGAGCCCGTCCCTGCCACACCCCGTCAGATCC
GAGCACGCGAAGCAGCCAATGCCAGAGACCTACCTACGCTCCTCTCCTTC
ATCAACGTACAAGATCCTGCCGCTCTTCGGATGACTTACTACCGCCGCAA
GCTTCATTTAATCACGGCATACAGCCCCGAAGCTCCTTCTCGTGGCGTAG
GTTGCCCCCTGCTGACAGCACGTCGAGAGCAGGGTGCGCCGGAGCTCAAC
GTGCACCACCACAACCACCACCACAAGCGAGGATATGTAAAAAGGGCGAA
GATTGATCGTCGTGGCAGCACTATGAGTAGCAGGCGCGGTAAGAGTGGCC
ATAGTAGTGCGTTGACTATGGGCTACGCGGAAAGGCGGGAGCGGGTGTTG
AGCCATGTGGTGACTGAGTTGAATGAAGATTTGTTTACGGACCTCTTGTT
GGACTATTGGTGAAGGAGGGGAAAGAGTGAGAAAAAAGAAAATTCATCAG
AGAGGGAGAAAGACTGGCAGACGAGAAGAATGACTTTTAGTTAGTGTGTA
TCTTACTATAGTACAGGTGAAAAAGAGAGGGAGAGCGCGCGGAAAGCATA
TGGAGTGTAGGTAAAGGATAGAGAGTGCGAGGGAGGGCGAGAGGGAAGCC
GGGTGACGGTATGGTGGTTCGCATATGTATGAAGAGGACATATGTCTCTA
ACAAACAACAGTGTGTGTACGTGTTTATTTAATTAATAAATGGAGTATCA
CATAAAAGGCAAGTACTTCCCACATCCAACGGAACACAAGAGAGAGATAA
AAATCAGAAGTACTACAATGCCCCCATAAGCTCATATCTAATCAAATAAT
GTAAGCCTGTAGGTAGGTCGGTAGTCCCACACACTTCACAAACACATACT
TACACATATATGCATGTTACACACATACAAGTCAAGTGGCATAGTCAGCC
AGAACGCCGAAAGTCAAAATGTCTGAAGGGACCCAGAAGTACGGCCCATG
CATCAGCCCAGTGAGTCACTGACTTGTGAAACGGAATAATATTGGGGGGG
ACAAGAAATAACAGAAGACAGAAGATATCAATAAGCAACGTGTCACCACC
ATCACGACGGCTCTGCCTTCTGACTAGATGTGATGATAAACGCAATAAGA
CCCATGCCTCTGAAGCACATATACGATTCGTTCATAGTACACAAACGTGA
AAGAGAGGGGGGAAATAAGGAGGAAAAGGGATATAGAT back to topCoding sequence (CDS) from alignment at scaffold_21:267208..269995- >mRNA_7764 ID=mRNA_7764|Name=jgi.p|Nanoce1779_2|632488|organism=Nannochloropsis oceanica|type=CDS|length=2718bp|location=Sequence derived from alignment at scaffold_21:267208..269995- (Nannochloropsis oceanica)
GTTGCCCCCTGCTGACAGCACGTCGAGAGCAGGGTGCGCCGGAGCTCAAC
GTGCACCACCACAACCACCACCACAAGCGAGGATATGTAAAAAGGGCGAA
GATTGATCGTCGTGGCAGCACTATGAGTAGCAGGCGCGGTAAGAGTGGCC
ATAGTAGTGCGTTGACTATGGGCTACGCGGAAAGGCGGGAGCGGGTGTTG
AGCCATGTGGTGACTGAGTTGAATGAAGATTTGTTTACGGACCTCTTGTT
GGACTATTGGTGAATGAGTGCCGCGTCATCTTCCCTTGCCAAGCGCAAGC
GGGGTGTCGAGGGCAGCGAGCCGCCTCAACCTCGCCACCCCCCTCCACGA
CGCCAGAGCCGCCGAAACGAGGCCAACAACAGCAACAATGTGCCGTCTAC
GGCCGCATCTTTGGAGAGGATCCTCCCCTCAACAAGCAGTACCAATGCCC
TTGAGTCGCCCGCGTTGCTTCCGCCCATCGACCCCCGTCCTCCCATCCCC
CAGGCTCCTACAGCCCTTCTTACTTCCATGGAGCGCCGCGCCTTGGGACT
GTCAGGGTTGCTCCTTGCTGCCTTTGTCGGCGACGCCGCCATGTTCGCCA
AGGAAGTACATCGCGTATCGACCTTGTCGGTGTCCTGTCCGTCCTCTTCC
TCTTCCTTCGCGTCCACCGCCTGGGGCCGTCTAGACGCCCACGGTCGTTC
CGTCCTCCATGCCGCCGCCTCCTCAGGGCATCCGACAATTCTTCGACAAG
TCCTTGCGGCCCAAGTTCTCGATATTGATACAGAGACCGAAGGTGGATTG
ACGGCATTGTGCTATTCCTTGGACCGACGCGACGTGGCTGGCGCCACCAC
CTTGCTTACCGCTGGGGCTGACCCCGGAAAAGTCGAAAAGATTTACGGAT
TGTGGGAGAGCGAGTGGGCAAGTGAGAAGATGGGCTTATTTGGAACATCA
CGAGAGGATGCTTTAGCCATTTTAAAGCTTGCTTTGTGTGCATCGGTGGC
ACGGAGAAATGAACAGGCTCAGCCGTGGTTGGATGGAGAGACGCAGCTCT
CGCTGTATGAGGAATGGAAAGCAAAGCTGAAAGTGGGGAGTAGGGTCGAT
GCGCGGGATTGTGATTATCGATGGTATGAAGCGGAGGTAATTGGAGTGTT
CCCTGGAGGGGTACGTGTGAGTTATCTAAGTTGGGGAAAGAGGTTTGATG
AGGACCTGGGCTTGGATAGCTTGAGGGTGTTACCTGCATACTCGGTAGTG
CCGGCGTGGAGGGAGAGCCTGGGGGTGGGGAGCCAGGTAGAAATTTTGGC
GGCGGCGGCAACAGCAGTGGTGGCGCCCGAGACGGGCCAAGGAGGGCCGG
AGATTGCTGGTTGCCCCCTGCTGACAGCACGTCGAGAGCAGGGTGCGCCG
GAGCTCAACGTGCACCACCACAACCACCACCACAAGCGAGGATATGTAAA
AAGGGCGAAGATTGATCGTCGTGGCAGCACTATGAGTAGCAGGCGCGGTA
AGAGTGGCCATAGTAGTGCGTTGACTATGGGCTACGCGGAAAGGCGGGAG
CGGGTGTTGAGCCATGTGGTGACTGAGTTGAATGAAGATTTGTTTACGGA
CCTCTTGTTGGACTATTGGTGAATGAGTGCCGCGTCATCTTCCCTTGCCA
AGCGCAAGCGGGGTGTCGAGGGCAGCGAGCCGCCTCAACCTCGCCACCCC
CCTCCACGACGCCAGAGCCGCCGAAACGAGGCCAACAACAGCAACAATGT
GCCGTCTACGGCCGCATCTTTGGAGAGGATCCTCCCCTCAACAAGCAGTA
CCAATGCCCTTGAGTCGCCCGCGTTGCTTCCGCCCATCGACCCCCGTCCT
CCCATCCCCCAGGCTCCTACAGCCCTTCTTACTTCCATGGAGCGCCGCGC
CTTGGGACTGTCAGGGTTGCTCCTTGCTGCCTTTGTCGGCGACGCCGCCA
TGTTCGCCAAGGAAGTACATCGCGTATCGACCTTGTCGGTGTCCTGTCCG
TCCTCTTCCTCTTCCTTCGCGTCCACCGCCTGGGGCCGTCTAGACGCCCA
CGGTCGTTCCGTCCTCCATGCCGCCGCCTCCTCAGGGCATCCGACAATTC
TTCGACAAGTCCTTGCGGCCCAAGTTCTCGATATTGATACAGAGACCGAA
GGTGGATTGACGGCATTGTGCTATTCCTTGGACCGACGCGACGTGGCTGG
CGCCACCACCTTGCTTACCGCTGGGGCTGACCCCGGAAAAGTCGAAAAGA
TTTACGGATTGTGGGAGAGCGAGTGGGCAAGTGAGAAGATGGGCTTATTT
GGAACATCACGAGAGGATGCTTTAGCCATTTTAAAGCTTGCTTTGTGTGC
ATCGGTGGCACGGAGAAATGAACAGGCTCAGCCGTGGTTGGATGGAGAGA
CGCAGCTCTCGCTGTATGAGGAATGGAAAGCAAAGCTGAAAGTGGGGAGT
AGGGTCGATGCGCGGGATTGTGATTATCGATGGTATGAAGCGGAGGTAAT
TGGAGTGTTCCCTGGAGGGGTACGTGTGAGTTATCTAAGTTGGGGAAAGA
GGTTTGATGAGGACCTGGGCTTGGATAGCTTGAGGGTGTTACCTGCATAC
TCGGTAGTGCCGGCGTGGAGGGAGAGCCTGGGGGTGGGGAGCCAGGTAGA
AATTTTGGCGGCGGCGGCAACAGCAGTGGTGGCGCCCGAGACGGGCCAAG
GAGGGCCGGAGATTGCTG back to top
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