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Properties
| Property Name | Value |
|---|
| TranscriptId | 600020 |
| Track | FilteredModels2 |
| ProteinId | 599934 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_21 | supercontig | scaffold_21:261843..264309 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7762 ID=mRNA_7762|Name=jgi.p|Nanoce1779_2|599934|organism=Nannochloropsis oceanica|type=mRNA|length=2090bp
ACAGGCACGGCACCCAAAAGGCAAACTAATTGCATTAGCAGCAGCATACG
GGAAGGATGACGGCTTTGGCATCAGGCGAGCAGGAGACCTCCAGAAATGA
GGACGAGCGCATTGGGGATCTGTTGACGCAGCGTGCGGGCCATACCACCC
CCTGGTTCTCCTTTGAGTTCTACCCACCTAAGACCCCCGAGGGCGTCGAG
AAGCTGTATGAGCGCTTGGCCAAGATGGCGCCTTACAATCCGCTGTTTGT
GGACTTCACGTGGGGCGCCGGCGGTTCTACGGCGGAGTTGACGCTGGAGC
TGACCATAGAGGCGAGGAGACGCTTTGGCTTGCTTGCCAACATGCATTTG
ACCTGCACCAACATGCCGACCGAGAAGGTCACAGAGGCTTTGGCTAAGGC
GAAGGAGGCAGGAATAACGAACATCCTCGCGTTGCGTGGCGACCCGCCTC
TGGGTCAAGAACGGTGGGAGCCCGTGGAAGGCGGCTTCTGTTCAGCCCTG
GACCTGGTCACGTATATTCGCAAGAATTACGGCACGTTTTTCAGTGTTGG
CGTGGCTGGGTACCCTGAGGGACACCCCAACCGGATTTCGCAAGTGGGGG
GGCTGGAGGGCCTGAGCGAGGCGGAGCGGGGCAGGGTGGCGGTGGAGAGG
GAGGAGGACGGGACAGTGACTGGCTTTTATGTGTGCAAAGACCAAGACTT
TGCGCAGGAGATTCAGTACTTGAAGCAGAAAGTGGAGGCGGGGGCTGACT
TTGTGATCACACAAATGTTCTTCGACTCGGAGGTGTACGTCGCTTTCGTC
GAGGCCTGCCATGCCGCTGGCATCCACGTGCCGATTATTCCGGGTATCAT
GTGTGTTAACACTGTCGGGGGATTCAGGCGTATGGTTAGCTTTTGTCATA
CTCGTGTCCCTGACCAGCTGTGGAAAGAGATGATGTCCTTGCCTAAGGAT
GACGAGGAGGCGGTGAGGAAGTACGGCACCGCGTTTGGTGTGCGCTTGAG
CCAGGAATTGCTATTGGCAGGTGCGAGCGGACTGCACTATTATTGCTTGA
ATCTGTCGAGGGTCGCGTTGGGGATTGTTACTGGTCTTGGATTGGGCCCG
CAGAGTGCTGATACTCCCCCTCACAGAGTGGAAAAGGTCGATGAAAAGCC
GATTAAGTCGCTTGTGAATGGTGCGGACAAGGAGGAGAAAGAGAAGGATT
TGGACGGGGAGCTTGTGGGGGCGGTAGCAAGCAGTTAGATGGGAGAGCAG
GAAGAAGAGGGAGAGTAGGGCATATTCGGGGAAGTTTGAATGTGAGTTTT
GGTGCATGGTAGTGAGTGAGGGATTTGTATGAATGGATTAGAGGGCGGTA
GATAGATGCGTATGTGTGAGAGAGTAACAGATTAAGAGTGACAACGGAGG
GATAGGAAGTATTGACGCAGAAGTAAGAGCATCTGCTGGGCCTCAACGAT
CGAAAAGAGAAGGTGAGGTCCTGAAAGTAACATTTGAACGTACGTGTGTC
CCTCTGCCAGTCGGTGAGTCTTCCTGCCTGTGTTCGAAAAAAGAGAACGA
GCTTCCCCCTCTTTTTCAGGTGGACAACGATGTACCAAAAAGCAGCGGTC
AAAGAAACATGATATATGACGACGATATTTTTGTCAGAGGATGGTTTGTT
TGATTCGTGCCTGGCTTGTAGACATATGGCTGGATAAAACGGGAACTGCA
ATAGACTGGAGGTTCCACCGGTGGCATCCATTGCGACAACGGTGCGCCTG
CGTCGACAATTTGCCATATCTCTCACACGATGAATGAGCGTCTGTAGGAT
AATACATTGGTGCTCACCCATAGAGCTATTGGCTGGTGTTCAATCAAGGC
AAGGGATGACACAGAAGAGGAGAGGGAGGCGACAAAGAAACAAGCAATAA
CTTATCGGTCCCCATGTCGTTCTGTGGGATGGGCTGGCCTGGCCACCACG
AAACAGCAACTTCATGCTTCGCCTCTCAGCTTTCCCCTTCATAGGGGTTG
TGCCTTGGTTCGTGAATGGCCCGCATATTCAGAGTGCTCCTCAGATCAAT
ACCCTCCACACGCTCACATCCACCCTCCGGCCTGCACCTT back to topprotein sequence of jgi.p|Nanoce1779_2|599934 >mRNA_7762-protein ID=mRNA_7762-protein|Name=jgi.p|Nanoce1779_2|599934|organism=Nannochloropsis oceanica|type=polypeptide|length=394bp
MTALASGEQETSRNEDERIGDLLTQRAGHTTPWFSFEFYPPKTPEGVEKL
YERLAKMAPYNPLFVDFTWGAGGSTAELTLELTIEARRRFGLLANMHLTC
TNMPTEKVTEALAKAKEAGITNILALRGDPPLGQERWEPVEGGFCSALDL
VTYIRKNYGTFFSVGVAGYPEGHPNRISQVGGLEGLSEAERGRVAVEREE
DGTVTGFYVCKDQDFAQEIQYLKQKVEAGADFVITQMFFDSEVYVAFVEA
CHAAGIHVPIIPGIMCVNTVGGFRRMVSFCHTRVPDQLWKEMMSLPKDDE
EAVRKYGTAFGVRLSQELLLAGASGLHYYCLNLSRVALGIVTGLGLGPQS
ADTPPHRVEKVDEKPIKSLVNGADKEEKEKDLDGELVGAVASS* back to topmRNA from alignment at scaffold_21:261843..264309- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7762 ID=mRNA_7762|Name=jgi.p|Nanoce1779_2|599934|organism=Nannochloropsis oceanica|type=mRNA|length=2467bp|location=Sequence derived from alignment at scaffold_21:261843..264309- (Nannochloropsis oceanica)
ACAGGCACGGCACCCAAAAGGCAAACTAATTGCATTAGCAGCAGCATACG
GGAAGGATGACGGCTTTGGCATCAGGCGAGCAGGAGACCTCCAGAAATGA
GGACGAGCGCATTGGGGATCTGTTGACGCAGCGTGCGGGCCATACCACCC
CCTGGTTCTCCTTTGAGTTCTACCCACCTAAGACCCCCGAGGGCGTCGAG
AAGCTGTATGAGCGCTTGGCCAAGATGGCGCCTTACAATCCGCTGTTTGT
GGACTTCACGTGGGGCGCCGGCGGTTCTACGGCGGAGTTGACGCTGGAGC
TGACCATAGAGGCGAGGAGACGCTTTGGCTTGCTTGCCAACATGCATTTG
ACCTGCACCAACATGCCGACCGAGAAGGTCACAGAGGCTTTGGCTAAGGC
GAAGGAGGCAGGAATAACGAACATCCTCGCGTTGCGTGGCGGTACGTATG
ATGTTCTTATGTGTAGGGGCGCTTTGGATGGGACCTTCGGCTGCGTATTC
TCGATTCGTCCCTCTAACTTTCTTACACTTCTCTTTTTCAACGACAAAAT
AGTGTGACCATCCAGTGTAAAATACTAGTTACTTGCATGCTTCCATTTCT
CACTCCGTCAACACACTCTCCCACCGCTTCTCACCCCCTCATCCTATCCA
CGTATATCACAGACCCGCCTCTGGGTCAAGAACGGTGGGAGCCCGTGGAA
GGCGGCTTCTGTTCAGCCCTGGACCTGGTCACGTATATTCGCAAGAATTA
CGGCACGTTTTTCAGTGTTGGCGTGGCTGGGTACCCTGAGGGACACCCCA
ACCGGATTTCGCAAGTGGGGGGGCTGGAGGGCCTGAGCGAGGCGGAGCGG
GGCAGGGTGGCGGTGGAGAGGGAGGAGGACGGGACAGTGACTGGCTTTTA
TGTGTGCAAAGACCAAGACTTTGCGCAGGAGATTCAGTACTTGAAGCAGA
AAGTGGAGGCGGGGGCTGACTTTGTGGTAGGTTGTCGATAAAACGGGCAT
GGGGGTTGAATTTGGGGGGTTGGGAAGGTGGAGGGGCTTAAACTTACATG
TCTTACCAAACTGTTCGCGGTAACTTCTTTCGCTACATTTTTTTTTCGCC
AATAATTCCGTCGCTTTTTCCCTTTCTTGCAGATCACACAAATGTTCTTC
GACTCGGAGGTGTACGTCGCTTTCGTCGAGGCCTGCCATGCCGCTGGCAT
CCACGTGCCGATTATTCCGGGTATCATGTGTGTTAACACTGTCGGGGGAT
TCAGGCGTATGGTTAGCTTTTGTCATACTCGTGTCCCTGACCAGCTGTGG
AAAGAGATGATGTCCTTGCCTAAGGATGACGAGGAGGCGGTGAGGAAGTA
CGGCACCGCGTTTGGTGTGCGCTTGAGCCAGGAATTGCTATTGGCAGGTG
CGAGCGGACTGCACTATTATTGCTTGAATCTGTCGAGGGTCGCGTTGGGG
ATTGTTACTGGTCTTGGATTGGGCCCGCAGAGTGCTGATACTCCCCCTCA
CAGAGTGGAAAAGGTCGATGAAAAGCCGATTAAGTCGCTTGTGAATGGTG
CGGACAAGGAGGAGAAAGAGAAGGATTTGGACGGGGAGCTTGTGGGGGCG
GTAGCAAGCAGTTAGATGGGAGAGCAGGAAGAAGAGGGAGAGTAGGGCAT
ATTCGGGGAAGTTTGAATGTGAGTTTTGGTGCATGGTAGTGAGTGAGGGA
TTTGTATGAATGGATTAGAGGGCGGTAGATAGATGCGTATGTGTGAGAGA
GTAACAGATTAAGAGTGACAACGGAGGGATAGGAAGTATTGACGCAGAAG
TAAGAGCATCTGCTGGGCCTCAACGATCGAAAAGAGAAGGTGAGGTCCTG
AAAGTAACATTTGAACGTACGTGTGTCCCTCTGCCAGTCGGTGAGTCTTC
CTGCCTGTGTTCGAAAAAAGAGAACGAGCTTCCCCCTCTTTTTCAGGTGG
ACAACGATGTACCAAAAAGCAGCGGTCAAAGAAACATGATATATGACGAC
GATATTTTTGTCAGAGGATGGTTTGTTTGATTCGTGCCTGGCTTGTAGAC
ATATGGCTGGATAAAACGGGAACTGCAATAGACTGGAGGTTCCACCGGTG
GCATCCATTGCGACAACGGTGCGCCTGCGTCGACAATTTGCCATATCTCT
CACACGATGAATGAGCGTCTGTAGGATAATACATTGGTGCTCACCCATAG
AGCTATTGGCTGGTGTTCAATCAAGGCAAGGGATGACACAGAAGAGGAGA
GGGAGGCGACAAAGAAACAAGCAATAACTTATCGGTCCCCATGTCGTTCT
GTGGGATGGGCTGGCCTGGCCACCACGAAACAGCAACTTCATGCTTCGCC
TCTCAGCTTTCCCCTTCATAGGGGTTGTGCCTTGGTTCGTGAATGGCCCG
CATATTCAGAGTGCTCCTCAGATCAATACCCTCCACACGCTCACATCCAC
CCTCCGGCCTGCACCTT back to topCoding sequence (CDS) from alignment at scaffold_21:261843..264309- >mRNA_7762 ID=mRNA_7762|Name=jgi.p|Nanoce1779_2|599934|organism=Nannochloropsis oceanica|type=CDS|length=3546bp|location=Sequence derived from alignment at scaffold_21:261843..264309- (Nannochloropsis oceanica)
ATCACACAAATGTTCTTCGACTCGGAGGTGTACGTCGCTTTCGTCGAGGC
CTGCCATGCCGCTGGCATCCACGTGCCGATTATTCCGGGTATCATGTGTG
TTAACACTGTCGGGGGATTCAGGCGTATGGTTAGCTTTTGTCATACTCGT
GTCCCTGACCAGCTGTGGAAAGAGATGATGTCCTTGCCTAAGGATGACGA
GGAGGCGGTGAGGAAGTACGGCACCGCGTTTGGTGTGCGCTTGAGCCAGG
AATTGCTATTGGCAGGTGCGAGCGGACTGCACTATTATTGCTTGAATCTG
TCGAGGGTCGCGTTGGGGATTGTTACTGGTCTTGGATTGGGCCCGCAGAG
TGCTGATACTCCCCCTCACAGAGTGGAAAAGGTCGATGAAAAGCCGATTA
AGTCGCTTGTGAATGGTGCGGACAAGGAGGAGAAAGAGAAGGATTTGGAC
GGGGAGCTTGTGGGGGCGGTAGCAAGCAGTTAGACCCGCCTCTGGGTCAA
GAACGGTGGGAGCCCGTGGAAGGCGGCTTCTGTTCAGCCCTGGACCTGGT
CACGTATATTCGCAAGAATTACGGCACGTTTTTCAGTGTTGGCGTGGCTG
GGTACCCTGAGGGACACCCCAACCGGATTTCGCAAGTGGGGGGGCTGGAG
GGCCTGAGCGAGGCGGAGCGGGGCAGGGTGGCGGTGGAGAGGGAGGAGGA
CGGGACAGTGACTGGCTTTTATGTGTGCAAAGACCAAGACTTTGCGCAGG
AGATTCAGTACTTGAAGCAGAAAGTGGAGGCGGGGGCTGACTTTGTGATG
ACGGCTTTGGCATCAGGCGAGCAGGAGACCTCCAGAAATGAGGACGAGCG
CATTGGGGATCTGTTGACGCAGCGTGCGGGCCATACCACCCCCTGGTTCT
CCTTTGAGTTCTACCCACCTAAGACCCCCGAGGGCGTCGAGAAGCTGTAT
GAGCGCTTGGCCAAGATGGCGCCTTACAATCCGCTGTTTGTGGACTTCAC
GTGGGGCGCCGGCGGTTCTACGGCGGAGTTGACGCTGGAGCTGACCATAG
AGGCGAGGAGACGCTTTGGCTTGCTTGCCAACATGCATTTGACCTGCACC
AACATGCCGACCGAGAAGGTCACAGAGGCTTTGGCTAAGGCGAAGGAGGC
AGGAATAACGAACATCCTCGCGTTGCGTGGCGATCACACAAATGTTCTTC
GACTCGGAGGTGTACGTCGCTTTCGTCGAGGCCTGCCATGCCGCTGGCAT
CCACGTGCCGATTATTCCGGGTATCATGTGTGTTAACACTGTCGGGGGAT
TCAGGCGTATGGTTAGCTTTTGTCATACTCGTGTCCCTGACCAGCTGTGG
AAAGAGATGATGTCCTTGCCTAAGGATGACGAGGAGGCGGTGAGGAAGTA
CGGCACCGCGTTTGGTGTGCGCTTGAGCCAGGAATTGCTATTGGCAGGTG
CGAGCGGACTGCACTATTATTGCTTGAATCTGTCGAGGGTCGCGTTGGGG
ATTGTTACTGGTCTTGGATTGGGCCCGCAGAGTGCTGATACTCCCCCTCA
CAGAGTGGAAAAGGTCGATGAAAAGCCGATTAAGTCGCTTGTGAATGGTG
CGGACAAGGAGGAGAAAGAGAAGGATTTGGACGGGGAGCTTGTGGGGGCG
GTAGCAAGCAGTTAGACCCGCCTCTGGGTCAAGAACGGTGGGAGCCCGTG
GAAGGCGGCTTCTGTTCAGCCCTGGACCTGGTCACGTATATTCGCAAGAA
TTACGGCACGTTTTTCAGTGTTGGCGTGGCTGGGTACCCTGAGGGACACC
CCAACCGGATTTCGCAAGTGGGGGGGCTGGAGGGCCTGAGCGAGGCGGAG
CGGGGCAGGGTGGCGGTGGAGAGGGAGGAGGACGGGACAGTGACTGGCTT
TTATGTGTGCAAAGACCAAGACTTTGCGCAGGAGATTCAGTACTTGAAGC
AGAAAGTGGAGGCGGGGGCTGACTTTGTGATGACGGCTTTGGCATCAGGC
GAGCAGGAGACCTCCAGAAATGAGGACGAGCGCATTGGGGATCTGTTGAC
GCAGCGTGCGGGCCATACCACCCCCTGGTTCTCCTTTGAGTTCTACCCAC
CTAAGACCCCCGAGGGCGTCGAGAAGCTGTATGAGCGCTTGGCCAAGATG
GCGCCTTACAATCCGCTGTTTGTGGACTTCACGTGGGGCGCCGGCGGTTC
TACGGCGGAGTTGACGCTGGAGCTGACCATAGAGGCGAGGAGACGCTTTG
GCTTGCTTGCCAACATGCATTTGACCTGCACCAACATGCCGACCGAGAAG
GTCACAGAGGCTTTGGCTAAGGCGAAGGAGGCAGGAATAACGAACATCCT
CGCGTTGCGTGGCGATCACACAAATGTTCTTCGACTCGGAGGTGTACGTC
GCTTTCGTCGAGGCCTGCCATGCCGCTGGCATCCACGTGCCGATTATTCC
GGGTATCATGTGTGTTAACACTGTCGGGGGATTCAGGCGTATGGTTAGCT
TTTGTCATACTCGTGTCCCTGACCAGCTGTGGAAAGAGATGATGTCCTTG
CCTAAGGATGACGAGGAGGCGGTGAGGAAGTACGGCACCGCGTTTGGTGT
GCGCTTGAGCCAGGAATTGCTATTGGCAGGTGCGAGCGGACTGCACTATT
ATTGCTTGAATCTGTCGAGGGTCGCGTTGGGGATTGTTACTGGTCTTGGA
TTGGGCCCGCAGAGTGCTGATACTCCCCCTCACAGAGTGGAAAAGGTCGA
TGAAAAGCCGATTAAGTCGCTTGTGAATGGTGCGGACAAGGAGGAGAAAG
AGAAGGATTTGGACGGGGAGCTTGTGGGGGCGGTAGCAAGCAGTTAGACC
CGCCTCTGGGTCAAGAACGGTGGGAGCCCGTGGAAGGCGGCTTCTGTTCA
GCCCTGGACCTGGTCACGTATATTCGCAAGAATTACGGCACGTTTTTCAG
TGTTGGCGTGGCTGGGTACCCTGAGGGACACCCCAACCGGATTTCGCAAG
TGGGGGGGCTGGAGGGCCTGAGCGAGGCGGAGCGGGGCAGGGTGGCGGTG
GAGAGGGAGGAGGACGGGACAGTGACTGGCTTTTATGTGTGCAAAGACCA
AGACTTTGCGCAGGAGATTCAGTACTTGAAGCAGAAAGTGGAGGCGGGGG
CTGACTTTGTGATGACGGCTTTGGCATCAGGCGAGCAGGAGACCTCCAGA
AATGAGGACGAGCGCATTGGGGATCTGTTGACGCAGCGTGCGGGCCATAC
CACCCCCTGGTTCTCCTTTGAGTTCTACCCACCTAAGACCCCCGAGGGCG
TCGAGAAGCTGTATGAGCGCTTGGCCAAGATGGCGCCTTACAATCCGCTG
TTTGTGGACTTCACGTGGGGCGCCGGCGGTTCTACGGCGGAGTTGACGCT
GGAGCTGACCATAGAGGCGAGGAGACGCTTTGGCTTGCTTGCCAACATGC
ATTTGACCTGCACCAACATGCCGACCGAGAAGGTCACAGAGGCTTTGGCT
AAGGCGAAGGAGGCAGGAATAACGAACATCCTCGCGTTGCGTGGCG back to top
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