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Properties
| Property Name | Value |
| TranscriptId | 667860 |
| Track | FilteredModels2 |
| ProteinId | 667774 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_2 | supercontig | scaffold_2:401374..404480 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_774 ID=mRNA_774|Name=jgi.p|Nanoce1779_2|667774|organism=Nannochloropsis oceanica|type=mRNA|length=3107bp GAACAATCGTCGCTGAAACCGGGCTTGACCATTACTTTCTCCTCATACCC ACGCCTCACTCACTATGTTATTAACCTGATCCCTACGCAGCAGCGGGGAT GTGGCTGCCATCCTCCAACCGGCTGGCTTTGGCGGTGCTGCTGAAGTTGT ACGTGGGGCCGGAAGCGCCCAAGGAGGACGCCACGCGCAATGGCGAAGTA ATGAGGGCCTTGAACCAGTGCAGTGAGCTCGTGTCGAGTATGACGCCTAC ACAATGGACAGCCCTGCCTTTGATTTTGCTGGAAGAGATAGAAGCGGTGG GTGAGGTACAGCGCGAAAAGCCCTTTGCCGCCCTATTGAGAAATGTGCGC GATGCTTGCGGGGCTAGCCTTCATGATTGCCTGAAGACCGTGATGAGAGC CTTACAATCCCCAGACGACGTCATCACCCTACTGGCCTTGCTGCATGATA TTCTCAAGCCACCTATATGCCCCACGGTGGACGGCCGCTTTGCCCGGCCA ACACACGTGGAGCCTGACAGTGTATTTGGCGTGTTTTTGCGGCAGGTACT TCTAGACTGCAATGGGTTAAATTTTGAGAGTTTGGGCTCCCTTTTGGACG ACATCAAGACCGACGTATGGGCACCTCTTCACTCAGTATCATCGTCATCG TTCACGCACCCCACCAGTTCTCGGCAAGCTCAGCAATACCTGCAACGCCG TGTGCTGGATCTAAACCACGACGTAGGCCGATGCACCTACGAGGACACCG AAGAGGAAGTCGAGCGACTCCTCCAGCGCCATCCCGAGCTTCCCCGAGGC CAATTCCTGCGCTATCTCAATTCAACCCGTCATGGTGAATTTTCTGGGGC ATTAGATTCATTACACAGATATTTTGACTACGCCATTCGTCGGGGCGGAC CAAATGCCACGGGGAAAACCAGCAGCAGCCGCAACATCGTTCAATACGCA TCTCTGAACCTGGCCGCCCTCCATTTTCGCCTCGGGCACACCGCCCTGGC CTTCGCGGCGATCAATGAGACGGTGCGCGTTGCCCAACAAAATGCAGATC ATCTCTGCGTGGCATTTGCCTTGGCATGGTTGAACCAACTTCTAGTCCGC GCCAGTGACCCACAAGCAGAAGAAGTTCTCTTTCGCTGCTTAGGTCGAGC GGCCGATCAGAAATTACGGCATTTAGAAAGCACAACAGCATTGTCTTTGG CTGAGTTTGAGGCGAGGGGAGGGAGTCGTTTCAATAGAGGGGCGTTCCAG ATGCCTGCGGCTTGGGGAAATGGCAGCAGCAGCAGCAGCAGCAGCAGCGA TAGTCATCTAACCCACCAGCATCACCCTTCCTCTACCCCTTCTTCCACGA CTGGTGCAAGTGGTCCCTGGGCGGGTATCGGCAGCGGTAGCATGAGCAAC AGCAACTGTGGTGGTGGTACGGGCGGTGTGGTCATAGGGCAAGAAAGCAG TCGTCCACGGTCAGTTTGGAATCTGCTTCGTCTTTCCATCGCTGCTGAGA CAGCCGGCCTCGCCCCTCCTCTTGGCATTGCTACCCCCAACCACACAACG GGTCCGCCGCAACCAGCCGGTGCGACGTTATCTGCCTTGCTGGCAAGTGC CTTGACACCAAGGGATGCATTCCCTCTGTCTTTGAAAGAGGCAGAAGAGC TCGCGAGTCGACGATGTGTTGTCGCGGCCGGGGCTTGGGAGCATTTGGGC CATAGAGAGATGACTCTATTGCAGGCCAAGAAATTGCTATATTGTTATAA TGAAGGAAGGACCGAGGGAGGAACGGTTAAAGGGGGGAGAGGGAGCACTC TAGACTTGTGCTTGGCGAGGATAAAAGTGGCACTAGCATGCCTGAGGGGG GGCGGGGGATTACGATTAGAAGAGACAGAAATAATGGAAGAGGAATCAGA GTCCTTGGCAGAAATGAGGGAAAGAGCTGGAGAAGAAAGAGAGGAAGGGA TTCATCATCACAATAGCACACCGCTTCCACCGGCGCAGCGGGCACGCAGC AGCAGCAGCAACAGCAGAAGCAGCAACAGTCGAATACGACACCGACCTGT CACTGCCGCTCTTACGCCTACTAGTAACAGCAGCAGCAAAAGTAACTTCT CCTCCTCCCACTACACAACTGCCATTCAAACCCTGACCACCCTTCAAGCC GACCTGCCGTCCCCCATCGCCCACCTCCTCCCTCACACTCTGTCCCTGCT CCAGCACGAACAAGCCCTCCTCCTCGGACAATCCCGCCTCGCATACGAAC GCGGCCTGCTTCTACGCAGCCTCTCCTCTCCAACCACCTGCACCGGCGCC AGCGCTCAAGGACAGGAGGCGCAGGTCGAAGGTCACCTGCAATGGGCCTT CTCCCTCCTGGAAACAGGAAGATCTACCGCCTGTGTCCTTGCCACGCAAC ATGTTTCCCAGCTCTGTGAACAATATTCCCTCCCCTGGCACTACATGCGT TGCCTTCTCCTCCATGCCCGCGTCCACCTCCAAGCTAACCCCTCCGACCC CTCCGCTGCCCTACCCCCACTCCTCCGCTGCCTAACCCTATGCGAAACGC TTGACACAGATCCTCTCCATGCGACCACCACCCTTCTCCTCTCTCAAGTT CAATTGCGCTTGGGGTTTCCCCGCAAGGCCCGTGCACTCTTACGAGCAGC CTTTCCTGTATTACTCGAGCATGCCCCTGTCCGTGACCAGGGCGAAGCCT GGTTGACTCTAGCCAAGTGTTATTTACAGGAGGAGGGAGGGAGGGGGGAC GAGGTGGAGGAAGGGGAGAAGGGAGAAAAGGAGGGCTTAGAGCAGGTAGT GGTCTTGTTGGTTAGGGCAGAGGAGGCATTTTCACGATGTGGGGACCTGA AGGCGATGAGGGAAGTGTATTATTTAGAGGCAAGAGTGTACGATGCTTTG GTGCAGTATCAGGCGTGTGGAGAGGAAGGGGAGGGAGGGAGGGAGGGAGA GGAGGGGGAGGAGGGAATGAGTTATATGGCGTTGAGAGAGGAGGTGTCAC GAAAGTTTTTCGTGGTGGTCCGGTTGTTGAGAAGAAATTGTTCGATGGAG GGAGGGAGGGAGGGAGAGGAGGAGGGCGGGGAGGAGGGCTTCATGAATAG TCATTGA back to topprotein sequence of jgi.p|Nanoce1779_2|667774 >mRNA_774-protein ID=mRNA_774-protein|Name=jgi.p|Nanoce1779_2|667774|organism=Nannochloropsis oceanica|type=polypeptide|length=1003bp MWLPSSNRLALAVLLKLYVGPEAPKEDATRNGEVMRALNQCSELVSSMTP TQWTALPLILLEEIEAVGEVQREKPFAALLRNVRDACGASLHDCLKTVMR ALQSPDDVITLLALLHDILKPPICPTVDGRFARPTHVEPDSVFGVFLRQV LLDCNGLNFESLGSLLDDIKTDVWAPLHSVSSSSFTHPTSSRQAQQYLQR RVLDLNHDVGRCTYEDTEEEVERLLQRHPELPRGQFLRYLNSTRHGEFSG ALDSLHRYFDYAIRRGGPNATGKTSSSRNIVQYASLNLAALHFRLGHTAL AFAAINETVRVAQQNADHLCVAFALAWLNQLLVRASDPQAEEVLFRCLGR AADQKLRHLESTTALSLAEFEARGGSRFNRGAFQMPAAWGNGSSSSSSSS DSHLTHQHHPSSTPSSTTGASGPWAGIGSGSMSNSNCGGGTGGVVIGQES SRPRSVWNLLRLSIAAETAGLAPPLGIATPNHTTGPPQPAGATLSALLAS ALTPRDAFPLSLKEAEELASRRCVVAAGAWEHLGHREMTLLQAKKLLYCY NEGRTEGGTVKGGRGSTLDLCLARIKVALACLRGGGGLRLEETEIMEEES ESLAEMRERAGEEREEGIHHHNSTPLPPAQRARSSSSNSRSSNSRIRHRP VTAALTPTSNSSSKSNFSSSHYTTAIQTLTTLQADLPSPIAHLLPHTLSL LQHEQALLLGQSRLAYERGLLLRSLSSPTTCTGASAQGQEAQVEGHLQWA FSLLETGRSTACVLATQHVSQLCEQYSLPWHYMRCLLLHARVHLQANPSD PSAALPPLLRCLTLCETLDTDPLHATTTLLLSQVQLRLGFPRKARALLRA AFPVLLEHAPVRDQGEAWLTLAKCYLQEEGGRGDEVEEGEKGEKEGLEQV VVLLVRAEEAFSRCGDLKAMREVYYLEARVYDALVQYQACGEEGEGGREG EEGEEGMSYMALREEVSRKFFVVVRLLRRNCSMEGGREGEEEGGEEGFMN SH* back to topmRNA from alignment at scaffold_2:401374..404480- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_774 ID=mRNA_774|Name=jgi.p|Nanoce1779_2|667774|organism=Nannochloropsis oceanica|type=mRNA|length=3107bp|location=Sequence derived from alignment at scaffold_2:401374..404480- (Nannochloropsis oceanica) GAACAATCGTCGCTGAAACCGGGCTTGACCATTACTTTCTCCTCATACCC
ACGCCTCACTCACTATGTTATTAACCTGATCCCTACGCAGCAGCGGGGAT
GTGGCTGCCATCCTCCAACCGGCTGGCTTTGGCGGTGCTGCTGAAGTTGT
ACGTGGGGCCGGAAGCGCCCAAGGAGGACGCCACGCGCAATGGCGAAGTA
ATGAGGGCCTTGAACCAGTGCAGTGAGCTCGTGTCGAGTATGACGCCTAC
ACAATGGACAGCCCTGCCTTTGATTTTGCTGGAAGAGATAGAAGCGGTGG
GTGAGGTACAGCGCGAAAAGCCCTTTGCCGCCCTATTGAGAAATGTGCGC
GATGCTTGCGGGGCTAGCCTTCATGATTGCCTGAAGACCGTGATGAGAGC
CTTACAATCCCCAGACGACGTCATCACCCTACTGGCCTTGCTGCATGATA
TTCTCAAGCCACCTATATGCCCCACGGTGGACGGCCGCTTTGCCCGGCCA
ACACACGTGGAGCCTGACAGTGTATTTGGCGTGTTTTTGCGGCAGGTACT
TCTAGACTGCAATGGGTTAAATTTTGAGAGTTTGGGCTCCCTTTTGGACG
ACATCAAGACCGACGTATGGGCACCTCTTCACTCAGTATCATCGTCATCG
TTCACGCACCCCACCAGTTCTCGGCAAGCTCAGCAATACCTGCAACGCCG
TGTGCTGGATCTAAACCACGACGTAGGCCGATGCACCTACGAGGACACCG
AAGAGGAAGTCGAGCGACTCCTCCAGCGCCATCCCGAGCTTCCCCGAGGC
CAATTCCTGCGCTATCTCAATTCAACCCGTCATGGTGAATTTTCTGGGGC
ATTAGATTCATTACACAGATATTTTGACTACGCCATTCGTCGGGGCGGAC
CAAATGCCACGGGGAAAACCAGCAGCAGCCGCAACATCGTTCAATACGCA
TCTCTGAACCTGGCCGCCCTCCATTTTCGCCTCGGGCACACCGCCCTGGC
CTTCGCGGCGATCAATGAGACGGTGCGCGTTGCCCAACAAAATGCAGATC
ATCTCTGCGTGGCATTTGCCTTGGCATGGTTGAACCAACTTCTAGTCCGC
GCCAGTGACCCACAAGCAGAAGAAGTTCTCTTTCGCTGCTTAGGTCGAGC
GGCCGATCAGAAATTACGGCATTTAGAAAGCACAACAGCATTGTCTTTGG
CTGAGTTTGAGGCGAGGGGAGGGAGTCGTTTCAATAGAGGGGCGTTCCAG
ATGCCTGCGGCTTGGGGAAATGGCAGCAGCAGCAGCAGCAGCAGCAGCGA
TAGTCATCTAACCCACCAGCATCACCCTTCCTCTACCCCTTCTTCCACGA
CTGGTGCAAGTGGTCCCTGGGCGGGTATCGGCAGCGGTAGCATGAGCAAC
AGCAACTGTGGTGGTGGTACGGGCGGTGTGGTCATAGGGCAAGAAAGCAG
TCGTCCACGGTCAGTTTGGAATCTGCTTCGTCTTTCCATCGCTGCTGAGA
CAGCCGGCCTCGCCCCTCCTCTTGGCATTGCTACCCCCAACCACACAACG
GGTCCGCCGCAACCAGCCGGTGCGACGTTATCTGCCTTGCTGGCAAGTGC
CTTGACACCAAGGGATGCATTCCCTCTGTCTTTGAAAGAGGCAGAAGAGC
TCGCGAGTCGACGATGTGTTGTCGCGGCCGGGGCTTGGGAGCATTTGGGC
CATAGAGAGATGACTCTATTGCAGGCCAAGAAATTGCTATATTGTTATAA
TGAAGGAAGGACCGAGGGAGGAACGGTTAAAGGGGGGAGAGGGAGCACTC
TAGACTTGTGCTTGGCGAGGATAAAAGTGGCACTAGCATGCCTGAGGGGG
GGCGGGGGATTACGATTAGAAGAGACAGAAATAATGGAAGAGGAATCAGA
GTCCTTGGCAGAAATGAGGGAAAGAGCTGGAGAAGAAAGAGAGGAAGGGA
TTCATCATCACAATAGCACACCGCTTCCACCGGCGCAGCGGGCACGCAGC
AGCAGCAGCAACAGCAGAAGCAGCAACAGTCGAATACGACACCGACCTGT
CACTGCCGCTCTTACGCCTACTAGTAACAGCAGCAGCAAAAGTAACTTCT
CCTCCTCCCACTACACAACTGCCATTCAAACCCTGACCACCCTTCAAGCC
GACCTGCCGTCCCCCATCGCCCACCTCCTCCCTCACACTCTGTCCCTGCT
CCAGCACGAACAAGCCCTCCTCCTCGGACAATCCCGCCTCGCATACGAAC
GCGGCCTGCTTCTACGCAGCCTCTCCTCTCCAACCACCTGCACCGGCGCC
AGCGCTCAAGGACAGGAGGCGCAGGTCGAAGGTCACCTGCAATGGGCCTT
CTCCCTCCTGGAAACAGGAAGATCTACCGCCTGTGTCCTTGCCACGCAAC
ATGTTTCCCAGCTCTGTGAACAATATTCCCTCCCCTGGCACTACATGCGT
TGCCTTCTCCTCCATGCCCGCGTCCACCTCCAAGCTAACCCCTCCGACCC
CTCCGCTGCCCTACCCCCACTCCTCCGCTGCCTAACCCTATGCGAAACGC
TTGACACAGATCCTCTCCATGCGACCACCACCCTTCTCCTCTCTCAAGTT
CAATTGCGCTTGGGGTTTCCCCGCAAGGCCCGTGCACTCTTACGAGCAGC
CTTTCCTGTATTACTCGAGCATGCCCCTGTCCGTGACCAGGGCGAAGCCT
GGTTGACTCTAGCCAAGTGTTATTTACAGGAGGAGGGAGGGAGGGGGGAC
GAGGTGGAGGAAGGGGAGAAGGGAGAAAAGGAGGGCTTAGAGCAGGTAGT
GGTCTTGTTGGTTAGGGCAGAGGAGGCATTTTCACGATGTGGGGACCTGA
AGGCGATGAGGGAAGTGTATTATTTAGAGGCAAGAGTGTACGATGCTTTG
GTGCAGTATCAGGCGTGTGGAGAGGAAGGGGAGGGAGGGAGGGAGGGAGA
GGAGGGGGAGGAGGGAATGAGTTATATGGCGTTGAGAGAGGAGGTGTCAC
GAAAGTTTTTCGTGGTGGTCCGGTTGTTGAGAAGAAATTGTTCGATGGAG
GGAGGGAGGGAGGGAGAGGAGGAGGGCGGGGAGGAGGGCTTCATGAATAG
TCATTGA back to topCoding sequence (CDS) from alignment at scaffold_2:401374..404480- >mRNA_774 ID=mRNA_774|Name=jgi.p|Nanoce1779_2|667774|organism=Nannochloropsis oceanica|type=CDS|length=3009bp|location=Sequence derived from alignment at scaffold_2:401374..404480- (Nannochloropsis oceanica) ATGTGGCTGCCATCCTCCAACCGGCTGGCTTTGGCGGTGCTGCTGAAGTT GTACGTGGGGCCGGAAGCGCCCAAGGAGGACGCCACGCGCAATGGCGAAG TAATGAGGGCCTTGAACCAGTGCAGTGAGCTCGTGTCGAGTATGACGCCT ACACAATGGACAGCCCTGCCTTTGATTTTGCTGGAAGAGATAGAAGCGGT GGGTGAGGTACAGCGCGAAAAGCCCTTTGCCGCCCTATTGAGAAATGTGC GCGATGCTTGCGGGGCTAGCCTTCATGATTGCCTGAAGACCGTGATGAGA GCCTTACAATCCCCAGACGACGTCATCACCCTACTGGCCTTGCTGCATGA TATTCTCAAGCCACCTATATGCCCCACGGTGGACGGCCGCTTTGCCCGGC CAACACACGTGGAGCCTGACAGTGTATTTGGCGTGTTTTTGCGGCAGGTA CTTCTAGACTGCAATGGGTTAAATTTTGAGAGTTTGGGCTCCCTTTTGGA CGACATCAAGACCGACGTATGGGCACCTCTTCACTCAGTATCATCGTCAT CGTTCACGCACCCCACCAGTTCTCGGCAAGCTCAGCAATACCTGCAACGC CGTGTGCTGGATCTAAACCACGACGTAGGCCGATGCACCTACGAGGACAC CGAAGAGGAAGTCGAGCGACTCCTCCAGCGCCATCCCGAGCTTCCCCGAG GCCAATTCCTGCGCTATCTCAATTCAACCCGTCATGGTGAATTTTCTGGG GCATTAGATTCATTACACAGATATTTTGACTACGCCATTCGTCGGGGCGG ACCAAATGCCACGGGGAAAACCAGCAGCAGCCGCAACATCGTTCAATACG CATCTCTGAACCTGGCCGCCCTCCATTTTCGCCTCGGGCACACCGCCCTG GCCTTCGCGGCGATCAATGAGACGGTGCGCGTTGCCCAACAAAATGCAGA TCATCTCTGCGTGGCATTTGCCTTGGCATGGTTGAACCAACTTCTAGTCC GCGCCAGTGACCCACAAGCAGAAGAAGTTCTCTTTCGCTGCTTAGGTCGA GCGGCCGATCAGAAATTACGGCATTTAGAAAGCACAACAGCATTGTCTTT GGCTGAGTTTGAGGCGAGGGGAGGGAGTCGTTTCAATAGAGGGGCGTTCC AGATGCCTGCGGCTTGGGGAAATGGCAGCAGCAGCAGCAGCAGCAGCAGC GATAGTCATCTAACCCACCAGCATCACCCTTCCTCTACCCCTTCTTCCAC GACTGGTGCAAGTGGTCCCTGGGCGGGTATCGGCAGCGGTAGCATGAGCA ACAGCAACTGTGGTGGTGGTACGGGCGGTGTGGTCATAGGGCAAGAAAGC AGTCGTCCACGGTCAGTTTGGAATCTGCTTCGTCTTTCCATCGCTGCTGA GACAGCCGGCCTCGCCCCTCCTCTTGGCATTGCTACCCCCAACCACACAA CGGGTCCGCCGCAACCAGCCGGTGCGACGTTATCTGCCTTGCTGGCAAGT GCCTTGACACCAAGGGATGCATTCCCTCTGTCTTTGAAAGAGGCAGAAGA GCTCGCGAGTCGACGATGTGTTGTCGCGGCCGGGGCTTGGGAGCATTTGG GCCATAGAGAGATGACTCTATTGCAGGCCAAGAAATTGCTATATTGTTAT AATGAAGGAAGGACCGAGGGAGGAACGGTTAAAGGGGGGAGAGGGAGCAC TCTAGACTTGTGCTTGGCGAGGATAAAAGTGGCACTAGCATGCCTGAGGG GGGGCGGGGGATTACGATTAGAAGAGACAGAAATAATGGAAGAGGAATCA GAGTCCTTGGCAGAAATGAGGGAAAGAGCTGGAGAAGAAAGAGAGGAAGG GATTCATCATCACAATAGCACACCGCTTCCACCGGCGCAGCGGGCACGCA GCAGCAGCAGCAACAGCAGAAGCAGCAACAGTCGAATACGACACCGACCT GTCACTGCCGCTCTTACGCCTACTAGTAACAGCAGCAGCAAAAGTAACTT CTCCTCCTCCCACTACACAACTGCCATTCAAACCCTGACCACCCTTCAAG CCGACCTGCCGTCCCCCATCGCCCACCTCCTCCCTCACACTCTGTCCCTG CTCCAGCACGAACAAGCCCTCCTCCTCGGACAATCCCGCCTCGCATACGA ACGCGGCCTGCTTCTACGCAGCCTCTCCTCTCCAACCACCTGCACCGGCG CCAGCGCTCAAGGACAGGAGGCGCAGGTCGAAGGTCACCTGCAATGGGCC TTCTCCCTCCTGGAAACAGGAAGATCTACCGCCTGTGTCCTTGCCACGCA ACATGTTTCCCAGCTCTGTGAACAATATTCCCTCCCCTGGCACTACATGC GTTGCCTTCTCCTCCATGCCCGCGTCCACCTCCAAGCTAACCCCTCCGAC CCCTCCGCTGCCCTACCCCCACTCCTCCGCTGCCTAACCCTATGCGAAAC GCTTGACACAGATCCTCTCCATGCGACCACCACCCTTCTCCTCTCTCAAG TTCAATTGCGCTTGGGGTTTCCCCGCAAGGCCCGTGCACTCTTACGAGCA GCCTTTCCTGTATTACTCGAGCATGCCCCTGTCCGTGACCAGGGCGAAGC CTGGTTGACTCTAGCCAAGTGTTATTTACAGGAGGAGGGAGGGAGGGGGG ACGAGGTGGAGGAAGGGGAGAAGGGAGAAAAGGAGGGCTTAGAGCAGGTA GTGGTCTTGTTGGTTAGGGCAGAGGAGGCATTTTCACGATGTGGGGACCT GAAGGCGATGAGGGAAGTGTATTATTTAGAGGCAAGAGTGTACGATGCTT TGGTGCAGTATCAGGCGTGTGGAGAGGAAGGGGAGGGAGGGAGGGAGGGA GAGGAGGGGGAGGAGGGAATGAGTTATATGGCGTTGAGAGAGGAGGTGTC ACGAAAGTTTTTCGTGGTGGTCCGGTTGTTGAGAAGAAATTGTTCGATGG AGGGAGGGAGGGAGGGAGAGGAGGAGGGCGGGGAGGAGGGCTTCATGAAT AGTCATTGA back to top
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