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Properties
| Property Name | Value |
|---|
| TranscriptId | 599947 |
| Track | FilteredModels2 |
| ProteinId | 599861 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_21 | supercontig | scaffold_21:212073..215685 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7738 ID=mRNA_7738|Name=jgi.p|Nanoce1779_2|599861|organism=Nannochloropsis oceanica|type=mRNA|length=3165bp
ACAGCTTTCTTGCGTCTCCTTCCGTTATGCTCATGCACGTGTGGAGGGGC
GGCATGCTGGTGGCCTGCTGCACGGTGTTGGCTTTCCTAGATCAAACGCA
CGCTTTCTTTCCCCTCTCTGCACTTTCTTCTTCGTCCTCTTCCGCAGCCG
CCCGTCGTCCAGTCCCGTCTGTGTCGGATAGCCACCCCAAGCCCACCTTC
TCCTGCCGGCTCTTCTCCTCTCCCTCTGTGGACTCGGAGGGAGAGACCAC
CGACGAGTTGTCTGAGGATGGAGTGTCCCTTCGGTCGCTCAAAGACGTAA
GCGCAGACTCTGCGTTTCTGGAAGCGCAAGTCATCGACTGGTTAGATAAC
GAATGGATCCCTCAAGATTGCCATAAGGAAGTTGCGCGCTTGGCAGCGGG
AGCATATATCAAGGCACGTGATGATGGCATACATGATTTGGGTGGTGTTT
TGCTGCATGTTGGGACGGAGTTGGAGGACATGGATATGGGGGATGCGTTC
GTGGATGCCTGGACCGTGGCTAACAAGGTGTCGGACCTCTTGCTGGTGCG
CATGGGTCGAGAGGTATGTTGCCCCGAGCCGGAGTTCACGGATGAACAGC
GTACGTTGATGACAGAGGGAAGGGGGGAGAGGGAGATTATGGCGTCGGGT
CTGCGGCCAATTGGGTCGTCGGGTGGGGCAAGTAGCGCTGATATTTTGAT
CGGTGGCGGTAATGGTGGTAGCTCCTTGCTGAAGGGCGGAGATGCACCGC
AGCTTTTGAACCCACAGGCACCCCCGGCTTTTTTCACGCTGGAGGCTGTA
CATACTGCGGCCGAGCATTACGTGGATGAATTCGCACGGTTTGATTTCAT
TCGCAAGTTTTTGGATGGGCACGACGAGGCATGGACCGAGGCCAATCTAA
TCATGGCTATTATTTTAGGGTTTCGTTTCGACGAATGGGGAAATGTGGAT
TTGGAGGGGGTGAATGAGCGTTTTAGATCGTTGGCGTTCCCCCCTGACTT
CCGGGGGAATGAGGAGATGCGGGTAGCGCTGGACGCTATTTTGAGGGAGG
ACGAGGATGAGGATAAGATGAAGGGATTGGAGGAGTTTTTGGAGGTTATG
GTGGGGAAGGCCTACTATCATCAAATGGATAAGGGGGATAACCCGGATTT
TGCGTGTCGCTCAACGCTGATAAAGTGGATTTATGAGTATGATTTTGTGA
ATGAATGGCCTAATCTGCCCAGCGTGCAAGCGGTTTTGGGCGTTAAGGCC
CGCATTGAGGCCAAGCAGGAGGAGAAGAGTAAGCCGCCCACGCGTTTTCT
CTACTAGATAAGCGAGATTTTATGGTAATAGGAACGTAGGCCGCAGAAAA
TGAATTTTGGCGAGTGGGAAGAGTGCGTGGTTGATGAGATGCTTTAGCCT
GTAATTGTAAAAAAATCGGAAAAAGAGGGGGAAAGAATGAGAAATACAGA
AGGCAAGTATCTCCAATGAAGGTGCGAACCACACATTGTGGCATTTTTGT
GTTGAGTTTGACTTTCCTTGCTTTCCGGGAGCGTACGCACCCCGCAGCAC
CAGCCACGTTCTCTCTGTCTCACGCTTACGTTTTTTCAATAAAATCCTTT
ATGAATACATAGGAGCAACAGGGACAAGAAAGTGATGACCCACAAGGTCG
CAAGGGTGGAGTTTGGCGGCAGCTCAGCGCAACAAACCCAGCAAAAGCGC
GTGCGGGCTGGGCATAAGCATCATCAAGACTCTAAGTACCGAGATTACAA
GCCCGACTTTGCTGCTCTCGCCCGCCAGTACCCCGACAGCTTTGGACCCT
TTGTCACCTACCTAGACACCGAAATGACAGAGGCAGTCGTAAATTGGGAG
GACCCCAAGGCAGCACGGGCCTTGACAAGGACCCTTCTCCAGCATGACTT
TCAACTAAAATGGGACATCCCGCTTGAGCGCTTGTGCCCCCCCGTCCCGA
ACCGCCTCAATTACATCTGCTGGGTCGAGGACCTTCTCCGGCTCAGACAG
ACGACAGTCGCTTATGCCAATGCCGTTAACAAGGGGGTAGTGAAGGGCTT
GGATGTGGGCACGGGTGCCTCTGCGATCTACCCATTATTGGGGTGCAAGG
TCTATGGTTGGAACTTTTTGGCAACGGATATCGACTCCACGGCCTTGGAA
GCGGCCCGGGCAAATGTGCGGAGAAATAAGCTGGAAGACCGTGTAACGCT
TAAATTGGTGCCTCGCATAAATTACAGCACAGACGTGTTCTCAAAGACGA
CGGCGGTGGCGGCGGCAGCGGCTGCTCCTCTTGGACCCATTCGAATGGCT
CTGGAAGCGGAGGATGCGAAGGCAACACAGCTGGCTTTCGTCATGTGCAA
TCCCCCTTTCTTCAGCTCTCTAGAGGAGATTCATGCTGGCTATGCCAATA
AAGACGGCAGGGGCGACATCAGCAGCTGCTGCGACGAGGGCCCACCGCCA
GTACCGCAGACTCCTCATGGGTGTGTCGATGAGGTGATCACCCCGGGGGG
GGAACTGTCCTTTGTCACGGCCATGGTGAGAGACAGTCTCGTCTTGCGCG
AGAAGATCGAATGGTATACGAGTATGGTGGGCAAAAAAAGCTCACTTAGA
AAGCTTTTGGGGGTACTGAGGGAGGGGGGGGTGCGGAATGTGAGGACGAC
GGAATTCTTGCAAGGGCGGACGACCCGGTGGGGTCTCGGGTGGAGCTTCA
CTGCTGCCGGATTGGAAGAGCTAGAGGGGGGCGGCGGGTGTGTACATAAA
GTTTTCGGGAAGAAGAAAATGGAGAAGAAACGAGAAGCTATTTATTCATT
TATGGTGAAGGAGGGGCAGGGAGGGGGATGGGAACAGGGATTGGATGAGG
AGGCGGTCTTGCAGCGTGTGCTCGATTACTTTCATAGCACAAGGCAACTA
CGCGTGGTGCGCGTTGGCTTCGCGTCAAGTGGTGCTGAGGATCTATTTCG
AAAAATGGTCGTGGCGGAGGTGAGTGGCCAGGGGGCGCCTGAAGGCCCCC
CTCCCACTGTTGCCTCTCATTTTGCTGTTCCTCCCGTTCCTCCTTCGGAT
CCTGCCTGGAGGACGCGATGCGTGGTGATGGTAACAATGTTGGCTGACGC
TGCTGCTCATGCACTGGAAGAGCACAAAAAGGAAACGACAGTAGGGGCGA
CAGGGATGGAGGTGG back to topprotein sequence of jgi.p|Nanoce1779_2|599861 >mRNA_7738-protein ID=mRNA_7738-protein|Name=jgi.p|Nanoce1779_2|599861|organism=Nannochloropsis oceanica|type=polypeptide|length=427bp
MLMHVWRGGMLVACCTVLAFLDQTHAFFPLSALSSSSSSAAARRPVPSVS
DSHPKPTFSCRLFSSPSVDSEGETTDELSEDGVSLRSLKDVSADSAFLEA
QVIDWLDNEWIPQDCHKEVARLAAGAYIKARDDGIHDLGGVLLHVGTELE
DMDMGDAFVDAWTVANKVSDLLLVRMGREVCCPEPEFTDEQRTLMTEGRG
EREIMASGLRPIGSSGGASSADILIGGGNGGSSLLKGGDAPQLLNPQAPP
AFFTLEAVHTAAEHYVDEFARFDFIRKFLDGHDEAWTEANLIMAIILGFR
FDEWGNVDLEGVNERFRSLAFPPDFRGNEEMRVALDAILREDEDEDKMKG
LEEFLEVMVGKAYYHQMDKGDNPDFACRSTLIKWIYEYDFVNEWPNLPSV
QAVLGVKARIEAKQEEKSKPPTRFLY* back to topmRNA from alignment at scaffold_21:212073..215685- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7738 ID=mRNA_7738|Name=jgi.p|Nanoce1779_2|599861|organism=Nannochloropsis oceanica|type=mRNA|length=3613bp|location=Sequence derived from alignment at scaffold_21:212073..215685- (Nannochloropsis oceanica)
ACAGCTTTCTTGCGTCTCCTTCCGTTATGCTCATGCACGTGTGGAGGGGC
GGCATGCTGGTGGCCTGCTGCACGGTGTTGGCTTTCCTAGATCAAACGCA
CGCTTTCTTTCCCCTCTCTGCACTTTCTTCTTCGTCCTCTTCCGCAGCCG
CCCGTCGTCCAGGTACGCACGCATTCTATTTGAAGAGGAAGAGCTAGGGG
ATGCTAGGATAGAGAGTCGCCGGGCTTGGAGGACCGCAGTGCTTGGAGTT
GGGTGTGTGGGGGAGAGGAGGTCAAATTGTGTTGCACCTACAAGCTTCGA
TGTTCTCGTTCGATCCCGTCTCCCGGCCTTTTGACTTTTAGATAGATATC
ACTGTTATGCTCAGTGGACTGGATGGCCACTCTCGTCCGCGATGCACAGT
CTCCTCCTTTAATCTAGACTTTCCCCTCACTTTCCCCATTCATACTCAGT
CCCGTCTGTGTCGGATAGCCACCCCAAGCCCACCTTCTCCTGCCGGCTCT
TCTCCTCTCCCTCTGTGGACTCGGAGGGAGAGACCACCGACGAGTTGTCT
GAGGATGGAGTGTCCCTTCGGTCGCTCAAAGACGTAAGCGCAGACTCTGC
GTTTCTGGAAGCGCAAGTCATCGACTGGTTAGATAACGAATGGATCCCTC
AAGATTGCCATAAGGAAGTTGCGCGCTTGGCAGCGGGAGCATATATCAAG
GCACGTGATGATGGCATACATGATTTGGGTGGTGTTTTGCTGCATGTTGG
GACGGAGTTGGAGGACATGGATATGGGGGATGCGTTCGTGGATGCCTGGA
CCGTGGCTAACAAGGTGTCGGACCTCTTGCTGGTGCGCATGGGTCGAGAG
GTATGTTGCCCCGAGCCGGAGTTCACGGATGAACAGCGTACGTTGATGAC
AGAGGGAAGGGGGGAGAGGGAGATTATGGCGTCGGGTCTGCGGCCAATTG
GGTCGTCGGGTGGGGCAAGTAGCGCTGATATTTTGATCGGTGGCGGTAAT
GGTGGTAGCTCCTTGCTGAAGGGCGGAGATGCACCGCAGCTTTTGAACCC
ACAGGCACCCCCGGCTTTTTTCACGCTGGAGGCTGTACATACTGCGGCCG
AGCATTACGTGGATGAATTCGCACGGTTTGATTTCATTCGCAAGTTTTTG
GATGGGCACGACGAGGCATGGACCGAGGCCAATCTAATCATGGCTATTAT
TTTAGGGTTTCGTTTCGACGAATGGGGAAATGTGGATTTGGAGGGGGTGA
ATGAGCGTTTTAGATCGTTGGCGTTCCCCCCTGACTTCCGGGGGAATGAG
GAGATGCGGGTAGCGCTGGACGCTATTTTGAGGGAGGACGAGGATGAGGA
TAAGATGAAGGGATTGGAGGAGTTTTTGGAGGTTATGGTGGGGAAGGCCT
ACTATCATCAAATGGATAAGGGGGATAACCCGGATTTTGCGTGTCGCTCA
ACGCTGATAAAGTGGATTTATGAGTATGATTTTGTGAATGAATGGCCTAA
TCTGCCCAGCGTGCAAGCGGTTTTGGGCGTTAAGGCCCGCATTGAGGCCA
AGCAGGAGGAGAAGAGTAAGCCGCCCACGCGTTTTCTCTACTAGATAAGC
GAGATTTTATGGTAATAGGAACGTAGGCCGCAGAAAATGAATTTTGGCGA
GTGGGAAGAGTGCGTGGTTGATGAGATGCTTTAGCCTGTAATTGTAAAAA
AATCGGAAAAAGAGGGGGAAAGAATGAGAAATACAGAAGGCAAGTATCTC
CAATGAAGGTGCGAACCACACATTGTGGCATTTTTGTGTTGAGTTTGACT
TTCCTTGCTTTCCGGGAGCGTACGCACCCCGCAGCACCAGCCACGTTCTC
TCTGTCTCACGCTTACGTTTTTTCAATAAAATCCTTTATGAATACATAGG
AGCAACAGGGACAAGAAAGTGATGACCCACAAGGTCGCAAGGGTGGAGTT
TGGCGGCAGCTCAGCGCAACAAACCCAGCAAAAGCGCGTGCGGGCTGGGC
ATAAGCATCATCAAGACTCTAAGTACCGAGATTACAAGCCCGACTTTGCT
GCTCTCGCCCGCCAGTACCCCGACAGCTTTGGACCCTTGTACGTCCCGCA
TTGTCTTCTTATCCTCCATATTCTTGATCTCCTTGCGTTTGTGTTGTCCT
CGTCCTGTCTGGAGCATCTTTTTCCCCATCACACCCGGCTTCCTGTTCCT
TACAGATCGTTCTCCTCCCGACCCTACCCAACCCCTTCACACTTCTCAGT
GTCACCTACCTAGACACCGAAATGACAGAGGCAGTCGTAAATTGGGAGGA
CCCCAAGGCAGCACGGGCCTTGACAAGGACCCTTCTCCAGCATGACTTTC
AACTAAAATGGGACATCCCGCTTGAGCGCTTGTGCCCCCCCGTCCCGAAC
CGCCTCAATTACATCTGCTGGGTCGAGGACCTTCTCCGGCTCAGACAGAC
GACAGTCGCTTATGCCAATGCCGTTAACAAGGGGGTAGTGAAGGGCTTGG
ATGTGGGCACGGGTGCCTCTGCGATCTACCCATTATTGGGGTGCAAGGTC
TATGGTTGGAACTTTTTGGCAACGGATATCGACTCCACGGCCTTGGAAGC
GGCCCGGGCAAATGTGCGGAGAAATAAGCTGGAAGACCGTGTAACGCTTA
AATTGGTGCCTCGCATAAATTACAGCACAGACGTGTTCTCAAAGACGACG
GCGGTGGCGGCGGCAGCGGCTGCTCCTCTTGGACCCATTCGAATGGCTCT
GGAAGCGGAGGATGCGAAGGCAACACAGCTGGCTTTCGTCATGTGCAATC
CCCCTTTCTTCAGCTCTCTAGAGGAGATTCATGCTGGCTATGCCAATAAA
GACGGCAGGGGCGACATCAGCAGCTGCTGCGACGAGGGCCCACCGCCAGT
ACCGCAGACTCCTCATGGGTGTGTCGATGAGGTGATCACCCCGGGGGGGG
AACTGTCCTTTGTCACGGCCATGGTGAGAGACAGTCTCGTCTTGCGCGAG
AAGATCGAATGGTATACGAGTATGGTGGGCAAAAAAAGCTCACTTAGAAA
GCTTTTGGGGGTACTGAGGGAGGGGGGGGTGCGGAATGTGAGGACGACGG
AATTCTTGCAAGGGCGGACGACCCGGTGGGGTCTCGGGTGGAGCTTCACT
GCTGCCGGATTGGAAGAGCTAGAGGGGGGCGGCGGGTGTGTACATAAAGT
TTTCGGGAAGAAGAAAATGGAGAAGAAACGAGAAGCTATTTATTCATTTA
TGGTGAAGGAGGGGCAGGGAGGGGGATGGGAACAGGGATTGGATGAGGAG
GCGGTCTTGCAGCGTGTGCTCGATTACTTTCATAGCACAAGGCAACTACG
CGTGGTGCGCGTTGGCTTCGCGTCAAGTGGTGCTGAGGATCTATTTCGAA
AAATGGTCGTGGCGGAGGTGAGTGGCCAGGGGGCGCCTGAAGGCCCCCCT
CCCACTGTTGCCTCTCATTTTGCTGTTCCTCCCGTTCCTCCTTCGGATCC
TGCCTGGAGGACGCGATGCGTGGTGATGGTAACAATGTTGGCTGACGCTG
CTGCTCATGCACTGGAAGAGCACAAAAAGGAAACGACAGTAGGGGCGACA
GGGATGGAGGTGG back to topCoding sequence (CDS) from alignment at scaffold_21:212073..215685- >mRNA_7738 ID=mRNA_7738|Name=jgi.p|Nanoce1779_2|599861|organism=Nannochloropsis oceanica|type=CDS|length=2562bp|location=Sequence derived from alignment at scaffold_21:212073..215685- (Nannochloropsis oceanica)
TCCCGTCTGTGTCGGATAGCCACCCCAAGCCCACCTTCTCCTGCCGGCTC
TTCTCCTCTCCCTCTGTGGACTCGGAGGGAGAGACCACCGACGAGTTGTC
TGAGGATGGAGTGTCCCTTCGGTCGCTCAAAGACGTAAGCGCAGACTCTG
CGTTTCTGGAAGCGCAAGTCATCGACTGGTTAGATAACGAATGGATCCCT
CAAGATTGCCATAAGGAAGTTGCGCGCTTGGCAGCGGGAGCATATATCAA
GGCACGTGATGATGGCATACATGATTTGGGTGGTGTTTTGCTGCATGTTG
GGACGGAGTTGGAGGACATGGATATGGGGGATGCGTTCGTGGATGCCTGG
ACCGTGGCTAACAAGGTGTCGGACCTCTTGCTGGTGCGCATGGGTCGAGA
GGTATGTTGCCCCGAGCCGGAGTTCACGGATGAACAGCGTACGTTGATGA
CAGAGGGAAGGGGGGAGAGGGAGATTATGGCGTCGGGTCTGCGGCCAATT
GGGTCGTCGGGTGGGGCAAGTAGCGCTGATATTTTGATCGGTGGCGGTAA
TGGTGGTAGCTCCTTGCTGAAGGGCGGAGATGCACCGCAGCTTTTGAACC
CACAGGCACCCCCGGCTTTTTTCACGCTGGAGGCTGTACATACTGCGGCC
GAGCATTACGTGGATGAATTCGCACGGTTTGATTTCATTCGCAAGTTTTT
GGATGGGCACGACGAGGCATGGACCGAGGCCAATCTAATCATGGCTATTA
TTTTAGGGTTTCGTTTCGACGAATGGGGAAATGTGGATTTGGAGGGGGTG
AATGAGCGTTTTAGATCGTTGGCGTTCCCCCCTGACTTCCGGGGGAATGA
GGAGATGCGGGTAGCGCTGGACGCTATTTTGAGGGAGGACGAGGATGAGG
ATAAGATGAAGGGATTGGAGGAGTTTTTGGAGGTTATGGTGGGGAAGGCC
TACTATCATCAAATGGATAAGGGGGATAACCCGGATTTTGCGTGTCGCTC
AACGCTGATAAAGTGGATTTATGAGTATGATTTTGTGAATGAATGGCCTA
ATCTGCCCAGCGTGCAAGCGGTTTTGGGCGTTAAGGCCCGCATTGAGGCC
AAGCAGGAGGAGAAGAGTAAGCCGCCCACGCGTTTTCTCTACTAGATGCT
CATGCACGTGTGGAGGGGCGGCATGCTGGTGGCCTGCTGCACGGTGTTGG
CTTTCCTAGATCAAACGCACGCTTTCTTTCCCCTCTCTGCACTTTCTTCT
TCGTCCTCTTCCGCAGCCGCCCGTCGTCCAGTCCCGTCTGTGTCGGATAG
CCACCCCAAGCCCACCTTCTCCTGCCGGCTCTTCTCCTCTCCCTCTGTGG
ACTCGGAGGGAGAGACCACCGACGAGTTGTCTGAGGATGGAGTGTCCCTT
CGGTCGCTCAAAGACGTAAGCGCAGACTCTGCGTTTCTGGAAGCGCAAGT
CATCGACTGGTTAGATAACGAATGGATCCCTCAAGATTGCCATAAGGAAG
TTGCGCGCTTGGCAGCGGGAGCATATATCAAGGCACGTGATGATGGCATA
CATGATTTGGGTGGTGTTTTGCTGCATGTTGGGACGGAGTTGGAGGACAT
GGATATGGGGGATGCGTTCGTGGATGCCTGGACCGTGGCTAACAAGGTGT
CGGACCTCTTGCTGGTGCGCATGGGTCGAGAGGTATGTTGCCCCGAGCCG
GAGTTCACGGATGAACAGCGTACGTTGATGACAGAGGGAAGGGGGGAGAG
GGAGATTATGGCGTCGGGTCTGCGGCCAATTGGGTCGTCGGGTGGGGCAA
GTAGCGCTGATATTTTGATCGGTGGCGGTAATGGTGGTAGCTCCTTGCTG
AAGGGCGGAGATGCACCGCAGCTTTTGAACCCACAGGCACCCCCGGCTTT
TTTCACGCTGGAGGCTGTACATACTGCGGCCGAGCATTACGTGGATGAAT
TCGCACGGTTTGATTTCATTCGCAAGTTTTTGGATGGGCACGACGAGGCA
TGGACCGAGGCCAATCTAATCATGGCTATTATTTTAGGGTTTCGTTTCGA
CGAATGGGGAAATGTGGATTTGGAGGGGGTGAATGAGCGTTTTAGATCGT
TGGCGTTCCCCCCTGACTTCCGGGGGAATGAGGAGATGCGGGTAGCGCTG
GACGCTATTTTGAGGGAGGACGAGGATGAGGATAAGATGAAGGGATTGGA
GGAGTTTTTGGAGGTTATGGTGGGGAAGGCCTACTATCATCAAATGGATA
AGGGGGATAACCCGGATTTTGCGTGTCGCTCAACGCTGATAAAGTGGATT
TATGAGTATGATTTTGTGAATGAATGGCCTAATCTGCCCAGCGTGCAAGC
GGTTTTGGGCGTTAAGGCCCGCATTGAGGCCAAGCAGGAGGAGAAGAGTA
AGCCGCCCACGCGTTTTCTCTACTAGATGCTCATGCACGTGTGGAGGGGC
GGCATGCTGGTGGCCTGCTGCACGGTGTTGGCTTTCCTAGATCAAACGCA
CGCTTTCTTTCCCCTCTCTGCACTTTCTTCTTCGTCCTCTTCCGCAGCCG
CCCGTCGTCCAG back to top
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