|
|
Properties
| Property Name | Value |
|---|
| TranscriptId | 167747 |
| Track | FilteredModels2 |
| ProteinId | 167661 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_21 | supercontig | scaffold_21:211740..213857 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7737 ID=mRNA_7737|Name=jgi.p|Nanoce1779_2|167661|organism=Nannochloropsis oceanica|type=mRNA|length=1957bp
CCGCAGCACCAGCCACGTTCTCTCTGTCTCACGCTTACGTTTTTTCAATA
AAATCCTTTATGAATACATAGGAGCAACAGGGACAAGAAAGTGATGACCC
ACAAGGTCGCAAGGGTGGAGTTTGGCGGCAGCTCAGCGCAACAAACCCAG
CAAAAGCGCGTGCGGGCTGGGCATAAGCATCATCAAGACTCTAAGTACCG
AGATTACAAGCCCGACTTTGCTGCTCTCGCCCGCCAGTACCCCGACAGCT
TTGGACCCTTTGTCACCTACCTAGACACCGAAATGACAGAGGCAGTCGTA
AATTGGGAGGACCCCAAGGCAGCACGGGCCTTGACAAGGACCCTTCTCCA
GCATGACTTTCAACTAAAATGGGACATCCCGCTTGAGCGCTTGTGCCCCC
CCGTCCCGAACCGCCTCAATTACATCTGCTGGGTCGAGGACCTTCTCCGG
CTCAGACAGACGACAGTCGCTTATGCCAATGCCGTTAACAAGGGGGTAGT
GAAGGGCTTGGATGTGGGCACGGGTGCCTCTGCGATCTACCCATTATTGG
GGTGCAAGGTCTATGGTTGGAACTTTTTGGCAACGGATATCGACTCCACG
GCCTTGGAAGCGGCCCGGGCAAATGTGCGGAGAAATAAGCTGGAAGACCG
TGTAACGCTTAAATTGGTGCCTCGCATAAATTACAGCACAGACGTGTTCT
CAAAGACGACGGCGGTGGCGGCGGCAGCGGCTGCTCCTCTTGGACCCATT
CGAATGGCTCTGGAAGCGGAGGATGCGAAGGCAACACAGCTGGCTTTCGT
CATGTGCAATCCCCCTTTCTTCAGCTCTCTAGAGGAGATTCATGCTGGCT
ATGCCAATAAAGACGGCAGGGGCGACATCAGCAGCTGCTGCGACGAGGGC
CCACCGCCAGTACCGCAGACTCCTCATGGGTGTGTCGATGAGGTGATCAC
CCCGGGGGGGGAACTGTCCTTTGTCACGGCCATGGTGAGAGACAGTCTCG
TCTTGCGCGAGAAGATCGAATGGTATACGAGTATGGTGGGCAAAAAAAGC
TCACTTAGAAAGCTTTTGGGGGTACTGAGGGAGGGGGGGGTGCGGAATGT
GAGGACGACGGAATTCTTGCAAGGGCGGACGACCCGGTGGGGTCTCGGGT
GGAGCTTCACTGCTGCCGGATTGGAAGAGCTAGAGGGGGGCGGCGGGTGT
GTACATAAAGTTTTCGGGAAGAAGAAAATGGAGAAGAAACGAGAAGCTAT
TTATTCATTTATGGTGAAGGAGGGGCAGGGAGGGGGATGGGAACAGGGAT
TGGATGAGGAGGCGGTCTTGCAGCGTGTGCTCGATTACTTTCATAGCACA
AGGCAACTACGCGTGGTGCGCGTTGGCTTCGCGTCAAGTGGTGCTGAGGA
TCTATTTCGAAAAATGGTCGTGGCGGAGGTGAGTGGCCAGGGGGCGCCTG
AAGGCCCCCCTCCCACTGTTGCCTCTCATTTTGCTGTTCCTCCCGTTCCT
CCTTCGGATCCTGCCTGGAGGACGCGATGCGTGGTGATGGTAACAATGTT
GGCTGACGCTGCTGCTCATGCACTGGAAGAGCACAAAAAGGAAACGACAG
TAGGGGCGACAGGGATGGAGGTGGAGAACGGAGGCAATAGTGGAGGAGAG
GAGGAGCGGGAAGACAAGGGGGAGCGAGGGCACTGGGTGAGGGTGACGGT
AGAAATGACCTCAGGTGGGGATCGGGCTGTATTCTGGAAGCTCTGCAGTC
TCTTGCCGGGGGAGGTGGCAAGGACCAATCGGACGTGGCGGCGGAAGCTC
AAAGGAGGAGGGGAGGGAGTTGAGGGGAGGGGGGAAGGAGGGGGAGAAGC
AGTGGCAAGCATGATTGCCGACTGAGATAACAAGAAGAGGGTATGTAAGG
GAATATGCGCTGAGCACCTGAGCAGCCACGGAGATGGGGCGCACACACTG
TCACAGC back to topprotein sequence of jgi.p|Nanoce1779_2|167661 >mRNA_7737-protein ID=mRNA_7737-protein|Name=jgi.p|Nanoce1779_2|167661|organism=Nannochloropsis oceanica|type=polypeptide|length=594bp
MTHKVARVEFGGSSAQQTQQKRVRAGHKHHQDSKYRDYKPDFAALARQYP
DSFGPFVTYLDTEMTEAVVNWEDPKAARALTRTLLQHDFQLKWDIPLERL
CPPVPNRLNYICWVEDLLRLRQTTVAYANAVNKGVVKGLDVGTGASAIYP
LLGCKVYGWNFLATDIDSTALEAARANVRRNKLEDRVTLKLVPRINYSTD
VFSKTTAVAAAAAAPLGPIRMALEAEDAKATQLAFVMCNPPFFSSLEEIH
AGYANKDGRGDISSCCDEGPPPVPQTPHGCVDEVITPGGELSFVTAMVRD
SLVLREKIEWYTSMVGKKSSLRKLLGVLREGGVRNVRTTEFLQGRTTRWG
LGWSFTAAGLEELEGGGGCVHKVFGKKKMEKKREAIYSFMVKEGQGGGWE
QGLDEEAVLQRVLDYFHSTRQLRVVRVGFASSGAEDLFRKMVVAEVSGQG
APEGPPPTVASHFAVPPVPPSDPAWRTRCVVMVTMLADAAAHALEEHKKE
TTVGATGMEVENGGNSGGEEEREDKGERGHWVRVTVEMTSGGDRAVFWKL
CSLLPGEVARTNRTWRRKLKGGGEGVEGRGEGGGEAVASMIAD* back to topmRNA from alignment at scaffold_21:211740..213857- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7737 ID=mRNA_7737|Name=jgi.p|Nanoce1779_2|167661|organism=Nannochloropsis oceanica|type=mRNA|length=2118bp|location=Sequence derived from alignment at scaffold_21:211740..213857- (Nannochloropsis oceanica)
CCGCAGCACCAGCCACGTTCTCTCTGTCTCACGCTTACGTTTTTTCAATA
AAATCCTTTATGAATACATAGGAGCAACAGGGACAAGAAAGTGATGACCC
ACAAGGTCGCAAGGGTGGAGTTTGGCGGCAGCTCAGCGCAACAAACCCAG
CAAAAGCGCGTGCGGGCTGGGCATAAGCATCATCAAGACTCTAAGTACCG
AGATTACAAGCCCGACTTTGCTGCTCTCGCCCGCCAGTACCCCGACAGCT
TTGGACCCTTGTACGTCCCGCATTGTCTTCTTATCCTCCATATTCTTGAT
CTCCTTGCGTTTGTGTTGTCCTCGTCCTGTCTGGAGCATCTTTTTCCCCA
TCACACCCGGCTTCCTGTTCCTTACAGATCGTTCTCCTCCCGACCCTACC
CAACCCCTTCACACTTCTCAGTGTCACCTACCTAGACACCGAAATGACAG
AGGCAGTCGTAAATTGGGAGGACCCCAAGGCAGCACGGGCCTTGACAAGG
ACCCTTCTCCAGCATGACTTTCAACTAAAATGGGACATCCCGCTTGAGCG
CTTGTGCCCCCCCGTCCCGAACCGCCTCAATTACATCTGCTGGGTCGAGG
ACCTTCTCCGGCTCAGACAGACGACAGTCGCTTATGCCAATGCCGTTAAC
AAGGGGGTAGTGAAGGGCTTGGATGTGGGCACGGGTGCCTCTGCGATCTA
CCCATTATTGGGGTGCAAGGTCTATGGTTGGAACTTTTTGGCAACGGATA
TCGACTCCACGGCCTTGGAAGCGGCCCGGGCAAATGTGCGGAGAAATAAG
CTGGAAGACCGTGTAACGCTTAAATTGGTGCCTCGCATAAATTACAGCAC
AGACGTGTTCTCAAAGACGACGGCGGTGGCGGCGGCAGCGGCTGCTCCTC
TTGGACCCATTCGAATGGCTCTGGAAGCGGAGGATGCGAAGGCAACACAG
CTGGCTTTCGTCATGTGCAATCCCCCTTTCTTCAGCTCTCTAGAGGAGAT
TCATGCTGGCTATGCCAATAAAGACGGCAGGGGCGACATCAGCAGCTGCT
GCGACGAGGGCCCACCGCCAGTACCGCAGACTCCTCATGGGTGTGTCGAT
GAGGTGATCACCCCGGGGGGGGAACTGTCCTTTGTCACGGCCATGGTGAG
AGACAGTCTCGTCTTGCGCGAGAAGATCGAATGGTATACGAGTATGGTGG
GCAAAAAAAGCTCACTTAGAAAGCTTTTGGGGGTACTGAGGGAGGGGGGG
GTGCGGAATGTGAGGACGACGGAATTCTTGCAAGGGCGGACGACCCGGTG
GGGTCTCGGGTGGAGCTTCACTGCTGCCGGATTGGAAGAGCTAGAGGGGG
GCGGCGGGTGTGTACATAAAGTTTTCGGGAAGAAGAAAATGGAGAAGAAA
CGAGAAGCTATTTATTCATTTATGGTGAAGGAGGGGCAGGGAGGGGGATG
GGAACAGGGATTGGATGAGGAGGCGGTCTTGCAGCGTGTGCTCGATTACT
TTCATAGCACAAGGCAACTACGCGTGGTGCGCGTTGGCTTCGCGTCAAGT
GGTGCTGAGGATCTATTTCGAAAAATGGTCGTGGCGGAGGTGAGTGGCCA
GGGGGCGCCTGAAGGCCCCCCTCCCACTGTTGCCTCTCATTTTGCTGTTC
CTCCCGTTCCTCCTTCGGATCCTGCCTGGAGGACGCGATGCGTGGTGATG
GTAACAATGTTGGCTGACGCTGCTGCTCATGCACTGGAAGAGCACAAAAA
GGAAACGACAGTAGGGGCGACAGGGATGGAGGTGGAGAACGGAGGCAATA
GTGGAGGAGAGGAGGAGCGGGAAGACAAGGGGGAGCGAGGGCACTGGGTG
AGGGTGACGGTAGAAATGACCTCAGGTGGGGATCGGGCTGTATTCTGGAA
GCTCTGCAGTCTCTTGCCGGGGGAGGTGGCAAGGACCAATCGGACGTGGC
GGCGGAAGCTCAAAGGAGGAGGGGAGGGAGTTGAGGGGAGGGGGGAAGGA
GGGGGAGAAGCAGTGGCAAGCATGATTGCCGACTGAGATAACAAGAAGAG
GGTATGTAAGGGAATATGCGCTGAGCACCTGAGCAGCCACGGAGATGGGG
CGCACACACTGTCACAGC back to topCoding sequence (CDS) from alignment at scaffold_21:211740..213857- >mRNA_7737 ID=mRNA_7737|Name=jgi.p|Nanoce1779_2|167661|organism=Nannochloropsis oceanica|type=CDS|length=3564bp|location=Sequence derived from alignment at scaffold_21:211740..213857- (Nannochloropsis oceanica)
TGTCACCTACCTAGACACCGAAATGACAGAGGCAGTCGTAAATTGGGAGG
ACCCCAAGGCAGCACGGGCCTTGACAAGGACCCTTCTCCAGCATGACTTT
CAACTAAAATGGGACATCCCGCTTGAGCGCTTGTGCCCCCCCGTCCCGAA
CCGCCTCAATTACATCTGCTGGGTCGAGGACCTTCTCCGGCTCAGACAGA
CGACAGTCGCTTATGCCAATGCCGTTAACAAGGGGGTAGTGAAGGGCTTG
GATGTGGGCACGGGTGCCTCTGCGATCTACCCATTATTGGGGTGCAAGGT
CTATGGTTGGAACTTTTTGGCAACGGATATCGACTCCACGGCCTTGGAAG
CGGCCCGGGCAAATGTGCGGAGAAATAAGCTGGAAGACCGTGTAACGCTT
AAATTGGTGCCTCGCATAAATTACAGCACAGACGTGTTCTCAAAGACGAC
GGCGGTGGCGGCGGCAGCGGCTGCTCCTCTTGGACCCATTCGAATGGCTC
TGGAAGCGGAGGATGCGAAGGCAACACAGCTGGCTTTCGTCATGTGCAAT
CCCCCTTTCTTCAGCTCTCTAGAGGAGATTCATGCTGGCTATGCCAATAA
AGACGGCAGGGGCGACATCAGCAGCTGCTGCGACGAGGGCCCACCGCCAG
TACCGCAGACTCCTCATGGGTGTGTCGATGAGGTGATCACCCCGGGGGGG
GAACTGTCCTTTGTCACGGCCATGGTGAGAGACAGTCTCGTCTTGCGCGA
GAAGATCGAATGGTATACGAGTATGGTGGGCAAAAAAAGCTCACTTAGAA
AGCTTTTGGGGGTACTGAGGGAGGGGGGGGTGCGGAATGTGAGGACGACG
GAATTCTTGCAAGGGCGGACGACCCGGTGGGGTCTCGGGTGGAGCTTCAC
TGCTGCCGGATTGGAAGAGCTAGAGGGGGGCGGCGGGTGTGTACATAAAG
TTTTCGGGAAGAAGAAAATGGAGAAGAAACGAGAAGCTATTTATTCATTT
ATGGTGAAGGAGGGGCAGGGAGGGGGATGGGAACAGGGATTGGATGAGGA
GGCGGTCTTGCAGCGTGTGCTCGATTACTTTCATAGCACAAGGCAACTAC
GCGTGGTGCGCGTTGGCTTCGCGTCAAGTGGTGCTGAGGATCTATTTCGA
AAAATGGTCGTGGCGGAGGTGAGTGGCCAGGGGGCGCCTGAAGGCCCCCC
TCCCACTGTTGCCTCTCATTTTGCTGTTCCTCCCGTTCCTCCTTCGGATC
CTGCCTGGAGGACGCGATGCGTGGTGATGGTAACAATGTTGGCTGACGCT
GCTGCTCATGCACTGGAAGAGCACAAAAAGGAAACGACAGTAGGGGCGAC
AGGGATGGAGGTGGAGAACGGAGGCAATAGTGGAGGAGAGGAGGAGCGGG
AAGACAAGGGGGAGCGAGGGCACTGGGTGAGGGTGACGGTAGAAATGACC
TCAGGTGGGGATCGGGCTGTATTCTGGAAGCTCTGCAGTCTCTTGCCGGG
GGAGGTGGCAAGGACCAATCGGACGTGGCGGCGGAAGCTCAAAGGAGGAG
GGGAGGGAGTTGAGGGGAGGGGGGAAGGAGGGGGAGAAGCAGTGGCAAGC
ATGATTGCCGACTGAATGACCCACAAGGTCGCAAGGGTGGAGTTTGGCGG
CAGCTCAGCGCAACAAACCCAGCAAAAGCGCGTGCGGGCTGGGCATAAGC
ATCATCAAGACTCTAAGTACCGAGATTACAAGCCCGACTTTGCTGCTCTC
GCCCGCCAGTACCCCGACAGCTTTGGACCCTTTGTCACCTACCTAGACAC
CGAAATGACAGAGGCAGTCGTAAATTGGGAGGACCCCAAGGCAGCACGGG
CCTTGACAAGGACCCTTCTCCAGCATGACTTTCAACTAAAATGGGACATC
CCGCTTGAGCGCTTGTGCCCCCCCGTCCCGAACCGCCTCAATTACATCTG
CTGGGTCGAGGACCTTCTCCGGCTCAGACAGACGACAGTCGCTTATGCCA
ATGCCGTTAACAAGGGGGTAGTGAAGGGCTTGGATGTGGGCACGGGTGCC
TCTGCGATCTACCCATTATTGGGGTGCAAGGTCTATGGTTGGAACTTTTT
GGCAACGGATATCGACTCCACGGCCTTGGAAGCGGCCCGGGCAAATGTGC
GGAGAAATAAGCTGGAAGACCGTGTAACGCTTAAATTGGTGCCTCGCATA
AATTACAGCACAGACGTGTTCTCAAAGACGACGGCGGTGGCGGCGGCAGC
GGCTGCTCCTCTTGGACCCATTCGAATGGCTCTGGAAGCGGAGGATGCGA
AGGCAACACAGCTGGCTTTCGTCATGTGCAATCCCCCTTTCTTCAGCTCT
CTAGAGGAGATTCATGCTGGCTATGCCAATAAAGACGGCAGGGGCGACAT
CAGCAGCTGCTGCGACGAGGGCCCACCGCCAGTACCGCAGACTCCTCATG
GGTGTGTCGATGAGGTGATCACCCCGGGGGGGGAACTGTCCTTTGTCACG
GCCATGGTGAGAGACAGTCTCGTCTTGCGCGAGAAGATCGAATGGTATAC
GAGTATGGTGGGCAAAAAAAGCTCACTTAGAAAGCTTTTGGGGGTACTGA
GGGAGGGGGGGGTGCGGAATGTGAGGACGACGGAATTCTTGCAAGGGCGG
ACGACCCGGTGGGGTCTCGGGTGGAGCTTCACTGCTGCCGGATTGGAAGA
GCTAGAGGGGGGCGGCGGGTGTGTACATAAAGTTTTCGGGAAGAAGAAAA
TGGAGAAGAAACGAGAAGCTATTTATTCATTTATGGTGAAGGAGGGGCAG
GGAGGGGGATGGGAACAGGGATTGGATGAGGAGGCGGTCTTGCAGCGTGT
GCTCGATTACTTTCATAGCACAAGGCAACTACGCGTGGTGCGCGTTGGCT
TCGCGTCAAGTGGTGCTGAGGATCTATTTCGAAAAATGGTCGTGGCGGAG
GTGAGTGGCCAGGGGGCGCCTGAAGGCCCCCCTCCCACTGTTGCCTCTCA
TTTTGCTGTTCCTCCCGTTCCTCCTTCGGATCCTGCCTGGAGGACGCGAT
GCGTGGTGATGGTAACAATGTTGGCTGACGCTGCTGCTCATGCACTGGAA
GAGCACAAAAAGGAAACGACAGTAGGGGCGACAGGGATGGAGGTGGAGAA
CGGAGGCAATAGTGGAGGAGAGGAGGAGCGGGAAGACAAGGGGGAGCGAG
GGCACTGGGTGAGGGTGACGGTAGAAATGACCTCAGGTGGGGATCGGGCT
GTATTCTGGAAGCTCTGCAGTCTCTTGCCGGGGGAGGTGGCAAGGACCAA
TCGGACGTGGCGGCGGAAGCTCAAAGGAGGAGGGGAGGGAGTTGAGGGGA
GGGGGGAAGGAGGGGGAGAAGCAGTGGCAAGCATGATTGCCGACTGAATG
ACCCACAAGGTCGCAAGGGTGGAGTTTGGCGGCAGCTCAGCGCAACAAAC
CCAGCAAAAGCGCGTGCGGGCTGGGCATAAGCATCATCAAGACTCTAAGT
ACCGAGATTACAAGCCCGACTTTGCTGCTCTCGCCCGCCAGTACCCCGAC
AGCTTTGGACCCTT back to top
|