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Properties
| Property Name | Value |
|---|
| TranscriptId | 599911 |
| Track | FilteredModels2 |
| ProteinId | 599825 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_21 | supercontig | scaffold_21:188744..190689 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7729 ID=mRNA_7729|Name=jgi.p|Nanoce1779_2|599825|organism=Nannochloropsis oceanica|type=mRNA|length=1946bp
ACAGGCAGGACACGTACCATGACTTCGTTGCTCCTGCATCGCGCATGGTC
CGACGCACGCACAAGAATAGTAGCAGTAGTTTCGCTTGCACCCCGTCCTT
CCATCCTCCCGTCGCCACCAGCGCTGCTGAGTCCCACGACGCTGTGCGTG
CGCTGGAAGCACGGGGCCAAGCGCCACCAAGGGGCCAAAAAGCGCTTCCG
CTTGCTACGAAATGGCGACGTGATGCGCGGGCATGCGGGCAAGAGCCACA
ACACGGGGCATCGCAGCACTGTGCAAATGTCGAGACTCCGTGTGAGCACC
ACTATCGCCCCGAGCTTTGCAGCACGCATCCGTAGACTTGTCTTAGGCGT
TTGAAGAATTTAACAAGAAAAGACATTTTGGAAGGATCATTATGATTGCT
TGCCGCGTTGTCCATAGGGGTGGGTGGTTGCGTGCGTGCATTTCCAGCAA
ATACCGGTTTCCTTTTTTGCACGGAAAAAGCCTGTCCATCACACGATTCG
TTTAAATTGACTTGTCGTTCACTTTAGTTATATTCATTGAATTGCGTTGG
TTAAGGGAAAGCGAAGAGGGCAACTCCTTTCTAACAATTGCTTTGATTAG
AAAATAGGACACCCTAGTGCGCGGGTGGCTGACTCCTCAAGCAAAGATCA
AAATGTTCTTATCGCAGTGTCTTCTTCTTGACTTCTCTTTTCATATCTCT
CCCGCCAACAGATTTGTTTTTAAATCAACATCAGGCTATTTACATGCATT
ATTACAGGCTTTCATCTCACCCCCGGCCACCCACCATCTTCCAACACACG
CAGACGCGGATGCCCAAGCTACATCACCCCCAATCATTTCTCAGACGGTG
AGACATCAATGCACGTCGACTTTTTGTCGTGAGACTTTCAACTCGTCTCC
TATCCCTGTACCTCCTCAAAATTCCCCCCCCTCCTCTGCCCCCTTGTCGT
CATGAGCCGGTGGCGTTATGATAAGGCTAATCACAACCTGCAAAGACGTC
AACGCGTAGCCTTCCGCGCCCAACAAAGTCCCCGTATCGCAAGTCTCTTC
AATAAATGCCAAATGAGCAGGCAATGCAGGCACCCGCGCCAATCGCACGA
CACGGCCCAGGGCCGGCAAGAGCTCATCTGCTGTCATTACCAAATTCCCT
TCCCCCAACGCCAAACAGGCCCCCAAAACACGTTGCACCTTCTTCCGACC
CGTCACCTCCCTACTCATTCTTATCAGCTCCTGAGCCGCCTTGTGGTAAT
GTGCGTCTGCACTAACAACCCCTCCTCGCTCCAACCCTTTTTCCTCTTCC
TCCTGCTCCGCAGGCTGCTGGCGATACCAAGCCTCGACAGCGCGGCTCAA
GGCCCGCACCTGATTCTGGCACTCCCAAAGCACAGATGGGTAGAGCGTCG
TCATAATTTCAGTTTCTACCGCCTCAAATGCTTCTTCGTAGGCTTCCAAC
GAGGAGCCTAACAGCCCTGGCACATATTCCATCAACACCAACGCAACCTC
GTGAATAATGGACGCCGCGTCTTCACAGCACGACCCAGCGGGGACTCCTC
CCTCCTCGTCCACTCTCGTTTCCTTCCTGTCCTCCCCCTCTTCCTCTTCG
TTTGTCTTTATGATGTCTGGTGATAGAGCCCGTCCAGCGCCCGCTGAAGC
TGCATGCCGCGCCACGAAACTATCCAAACAGGCTGCCCACACAAAGCCTG
GGGGCGTCCGAGAAGAACGCAAAATCTGTCCAATGAAAGGGGCGCTTGAA
TCGTCCCACCTTGGTTCGACTGACCTTCTCCTGGGGCCTATGGATTCGTC
GTTGTTTACTTTCTTCTCCTCTAGGGTGCGAGTAAACGTAGCCAGGTCTA
ACAAGGCACCTGCCCCTCCCTCCCCACCTCCTCCTCCCTCGGGCCGGCTT
GCTCGCTGTGCTAGACGAGACCAAGCCATAGCCACTGGCGACGTTC back to topprotein sequence of jgi.p|Nanoce1779_2|599825 >mRNA_7729-protein ID=mRNA_7729-protein|Name=jgi.p|Nanoce1779_2|599825|organism=Nannochloropsis oceanica|type=polypeptide|length=112bp
MTSLLLHRAWSDARTRIVAVVSLAPRPSILPSPPALLSPTTLCVRWKHGA
KRHQGAKKRFRLLRNGDVMRGHAGKSHNTGHRSTVQMSRLRVSTTIAPSF
AARIRRLVLGV* back to topmRNA from alignment at scaffold_21:188744..190689- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7729 ID=mRNA_7729|Name=jgi.p|Nanoce1779_2|599825|organism=Nannochloropsis oceanica|type=mRNA|length=1946bp|location=Sequence derived from alignment at scaffold_21:188744..190689- (Nannochloropsis oceanica)
ACAGGCAGGACACGTACCATGACTTCGTTGCTCCTGCATCGCGCATGGTC
CGACGCACGCACAAGAATAGTAGCAGTAGTTTCGCTTGCACCCCGTCCTT
CCATCCTCCCGTCGCCACCAGCGCTGCTGAGTCCCACGACGCTGTGCGTG
CGCTGGAAGCACGGGGCCAAGCGCCACCAAGGGGCCAAAAAGCGCTTCCG
CTTGCTACGAAATGGCGACGTGATGCGCGGGCATGCGGGCAAGAGCCACA
ACACGGGGCATCGCAGCACTGTGCAAATGTCGAGACTCCGTGTGAGCACC
ACTATCGCCCCGAGCTTTGCAGCACGCATCCGTAGACTTGTCTTAGGCGT
TTGAAGAATTTAACAAGAAAAGACATTTTGGAAGGATCATTATGATTGCT
TGCCGCGTTGTCCATAGGGGTGGGTGGTTGCGTGCGTGCATTTCCAGCAA
ATACCGGTTTCCTTTTTTGCACGGAAAAAGCCTGTCCATCACACGATTCG
TTTAAATTGACTTGTCGTTCACTTTAGTTATATTCATTGAATTGCGTTGG
TTAAGGGAAAGCGAAGAGGGCAACTCCTTTCTAACAATTGCTTTGATTAG
AAAATAGGACACCCTAGTGCGCGGGTGGCTGACTCCTCAAGCAAAGATCA
AAATGTTCTTATCGCAGTGTCTTCTTCTTGACTTCTCTTTTCATATCTCT
CCCGCCAACAGATTTGTTTTTAAATCAACATCAGGCTATTTACATGCATT
ATTACAGGCTTTCATCTCACCCCCGGCCACCCACCATCTTCCAACACACG
CAGACGCGGATGCCCAAGCTACATCACCCCCAATCATTTCTCAGACGGTG
AGACATCAATGCACGTCGACTTTTTGTCGTGAGACTTTCAACTCGTCTCC
TATCCCTGTACCTCCTCAAAATTCCCCCCCCTCCTCTGCCCCCTTGTCGT
CATGAGCCGGTGGCGTTATGATAAGGCTAATCACAACCTGCAAAGACGTC
AACGCGTAGCCTTCCGCGCCCAACAAAGTCCCCGTATCGCAAGTCTCTTC
AATAAATGCCAAATGAGCAGGCAATGCAGGCACCCGCGCCAATCGCACGA
CACGGCCCAGGGCCGGCAAGAGCTCATCTGCTGTCATTACCAAATTCCCT
TCCCCCAACGCCAAACAGGCCCCCAAAACACGTTGCACCTTCTTCCGACC
CGTCACCTCCCTACTCATTCTTATCAGCTCCTGAGCCGCCTTGTGGTAAT
GTGCGTCTGCACTAACAACCCCTCCTCGCTCCAACCCTTTTTCCTCTTCC
TCCTGCTCCGCAGGCTGCTGGCGATACCAAGCCTCGACAGCGCGGCTCAA
GGCCCGCACCTGATTCTGGCACTCCCAAAGCACAGATGGGTAGAGCGTCG
TCATAATTTCAGTTTCTACCGCCTCAAATGCTTCTTCGTAGGCTTCCAAC
GAGGAGCCTAACAGCCCTGGCACATATTCCATCAACACCAACGCAACCTC
GTGAATAATGGACGCCGCGTCTTCACAGCACGACCCAGCGGGGACTCCTC
CCTCCTCGTCCACTCTCGTTTCCTTCCTGTCCTCCCCCTCTTCCTCTTCG
TTTGTCTTTATGATGTCTGGTGATAGAGCCCGTCCAGCGCCCGCTGAAGC
TGCATGCCGCGCCACGAAACTATCCAAACAGGCTGCCCACACAAAGCCTG
GGGGCGTCCGAGAAGAACGCAAAATCTGTCCAATGAAAGGGGCGCTTGAA
TCGTCCCACCTTGGTTCGACTGACCTTCTCCTGGGGCCTATGGATTCGTC
GTTGTTTACTTTCTTCTCCTCTAGGGTGCGAGTAAACGTAGCCAGGTCTA
ACAAGGCACCTGCCCCTCCCTCCCCACCTCCTCCTCCCTCGGGCCGGCTT
GCTCGCTGTGCTAGACGAGACCAAGCCATAGCCACTGGCGACGTTC back to topCoding sequence (CDS) from alignment at scaffold_21:188744..190689- >mRNA_7729 ID=mRNA_7729|Name=jgi.p|Nanoce1779_2|599825|organism=Nannochloropsis oceanica|type=CDS|length=336bp|location=Sequence derived from alignment at scaffold_21:188744..190689- (Nannochloropsis oceanica)
ATGACTTCGTTGCTCCTGCATCGCGCATGGTCCGACGCACGCACAAGAAT
AGTAGCAGTAGTTTCGCTTGCACCCCGTCCTTCCATCCTCCCGTCGCCAC
CAGCGCTGCTGAGTCCCACGACGCTGTGCGTGCGCTGGAAGCACGGGGCC
AAGCGCCACCAAGGGGCCAAAAAGCGCTTCCGCTTGCTACGAAATGGCGA
CGTGATGCGCGGGCATGCGGGCAAGAGCCACAACACGGGGCATCGCAGCA
CTGTGCAAATGTCGAGACTCCGTGTGAGCACCACTATCGCCCCGAGCTTT
GCAGCACGCATCCGTAGACTTGTCTTAGGCGTTTGA back to top
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