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Properties
| Property Name | Value |
|---|
| TranscriptId | 599838 |
| Track | FilteredModels2 |
| ProteinId | 599752 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_21 | supercontig | scaffold_21:149457..152963 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7714 ID=mRNA_7714|Name=jgi.p|Nanoce1779_2|599752|organism=Nannochloropsis oceanica|type=mRNA|length=3274bp
GTATTTTATGTATTTGCCGACAATGTGCATTTATTCTTTGTGTGTTTATC
CTATTTACGTCCTTAACAGTTTCTTTCGATTTATTTTATGTTGTCGCATT
TGTTTTTACCACGCATGCATCGTCGGTTCAAACCACGTACATCGGTGTGA
CATCACGACAGCATGGGCCACAGCCCGCCAAAAGCTCTCCAGTCGCCCGG
GCTTTATTCGGTTCCATGACACTTCTGGCAAAAGGGGCTCATGGACTCAA
CAATTGTCTGGGGAGAGCCTAGGCTCGACTAAGATGTCAAGACGCGAATG
CCAAGTCAACTGTGTTACTCGCCTTCCTCCCAGTCGACCTCGTCCTCGTC
CTCGTCCTCTTGCTCTTCGCCTACCTCCCTCTTGACTGCCGCTACCGATT
CTCGAACCCCTCCACCCTCCTTCCTATAATTATCTTCCCCCAACTCTTTT
TGTAACGCTTCGACGTACGCCCGCCGGTAAGCCTCGATTCGCTCGGCCTC
GGTTATTACCTCCACCTCTCTCTTTGGCAGCTGATTGCCCCCACTATCAT
TGAAGCCTTCGCCCCGACTCACTTGCTGTGCACTTCCCGCAGCTTGTTCG
AGATGGTCAGTGTCCTCCTTGATGACACGACTGCCCTGCAAAAAGGATGG
CTGGGCCCGGGCAGTCCGCAACACATTCAGCATCGATTCGCCCATCGTTT
CCTCGTCCGCCTGGATGCCACCATCCCGCGTGGAGGCGGCCAGGTCTTCG
AAGATGCCGGCCGACCCCCCGCCCGGATGATTTCCCATCCCTCCACACCA
GCCTCCACGTCGGCGCCTCCGAATTTCGTCCTCCTCGCTCTGGCCGCCGC
CCACACCCACAGCAAGGAGCTCGCTAGGCAGGTTGCTTGGCAATGGCTTT
TGCTCCAAGGAAGATAGCAAGTTGTAGATGCCGTCGTGTGAGGCTGCGCT
GGTTTCGTCTGTGGCAATGTACATCTGAGTGCGTAACTTATCTTTGAGTG
CCTGGACTTCTTCGAACCCCGTCACGCCTGTCTTTGGCCGAAGCTGAAAC
CTGATGCCGTCACAGGTGGAGTGCATTTCATTGTTGCAGCAGGTAGGACA
GCAAAACCCATACCGTTGGTTGCGCAACGGTTGCACCTCTAAGAGCGGTA
GTGTGCGGCCGCAGTGAGGACATTCGTATGTTTGGTTGTCATTGGCCTCC
CGCTCCATTCGCTCTAACTCCCGGTGCATGAGGTGGACCCGGTACCGCAC
CACGTTGGTAAAGTGAGAAAAATCTATATAGTAGTATAATTCCCGTTTCC
CCGTCGACTCATCTAGCACGTCTTCAGTCCGGATCAAGTGCTCCTCCAAT
AACTCCGTGAGCAGGCGCCGTGCTTGCTTGGCCCCCACGCCCAGACGTGT
CTCCATATCAGTGTCTCTCAAATGACGGTCTCGGAGCAAGGCCTCCAGCA
CCACTATTGTATCGTCCGCATAAAAGGCCTGCGCCACGGCCCGCACTAAT
CGCGTCGCCAGGTCGATGGGCGTCTCGATCCCCGTCAAAATGTTTCCACT
GGTGTTGATGCCGCCGTCTCCTCCTCTGGCCCCGCCACCAACCCCTCCGC
TGTGCAGCATCGCGTAGAAAAAAGTGGCTGAAGCCGGCAAAGCCTTACCT
GGACAGCCTGGAAGTCACGCAGGCCGAAAGTGTTTCGTAACTTTGCCCCC
CTCCTCCCCACAGCCACATCATTATTGCACGCCTCGTACTAACAAACTAT
AGCCTAGCTATGTGTGACAGCCTGCTCGCGGACTGGGCACGGCTCCGGGA
TAAACAGCGCCAGAATACGGAGGTAACGTTGCGGTTGGTGGACAGGGTGA
GCGTGGCTGTGGAAGAAGTTGCCACAGCGACAGCATCCACGACCTCCCGC
GGTCCTCCTTCCCCAACCTCCCTCGATGATGTCATTCCGCAGCTGGTCCA
GCAGCACAAGACCTACCACGCTGCCCTTTCCAAATTCATCAAGGCCGTGG
ACCGGATCTTTCTAGAGGCCAAACCACCAGTCGTAATGTGCCGCCCCTCC
GTAACTCTGGATCCTCGCCTGATTGATGAGATGGTGGCCTTGCACCTCTA
CCGCGAAGGAAGGACGTGCACCGCCGCCAAGCTCGTGGAAGAAGCGGGTC
TTTCATCAGCGGCACTTCGATTTGAAGCGCACGAAGCATTGGCTCGTGTA
CATAAAGTGATCACTGCGGCGATTGAGCGCCGAGAGTTGGGACCGGCTTG
TCGGTGGGCGGCAGAGCATCACGAGGGGTTGCAGCGACTGGGAAGCAACC
TGGAGTTTCAGCTTGCGCGACTCCAGTTCCTCGTACTGTTGACTAGGGAT
AATGTCTGTAATGCCAGATGGAAAGAGACAGAGGTTGTAAAGATGGAAGA
CGCCAAGGATGAGGAGGAAGAGGGGAAGAGCAAACATGAGCGGGGACGGA
AGCGGATCCGAGATGACGTGGCTTTGACTTTTGCACGACAGCACCTCGCC
CCTTTCGCCGTAGCCGGCGGCGGCCACATGGAGCAAGTGCGGACGCTGAT
GGGATGTCTGCTCTATGCGGGCCGCCTTGACCGTTCACCCTACCAGGACT
TGCTCTCGCCGGAGTTGTGGGAGGAAGCCATGGAGGCGCTGCACACGGAA
GGCTGTCGCTTGCTCGGCCTACCGGTAGAAAGCCCGTTGAGTGTGTGCTA
TCGCGCCAGTCTGCGGGCGCTTGGACCCTTGGCGAAGATGCGACAGGTGG
TGCAGAATAGCACGGGGGATTGGGAGGGGCTGGAGGAGTTGCCGGGGGAG
ATCGACCTTGGGGGGAAACCCTCCCTGCGGTTTCACAGCGTCTTTTCTTG
TCCTGTCACGAGGGAGCAGGCCAGTTGGGCGAATCCTCCCATGATGCTCA
AATGTGGGCATGTCATTTGCCGCAGTAGCCTCGCAAGGCTGATGAAGGGC
GGGCATGGGCACAACGGCGGGCATCCGCAGCAGCGGTTCAAGTGCTTTGT
GTGCCCGGTGGAGCAGTACCCGCAGGACGCACAGCAGCTGTACTTTTGAA
GTGAGAGAAAGAGAGGAAAAACGAGATAGAAGAAGCGAGAAAAAACGATA
TATGACGATACATGACCTGTATAGACCATCACTGAAGAAGAAAGTGGAAG
AACACTTAAAGACGGGATAATCATGATGCCTCTTCCCCCTACCCCCTTTT
ATCCTGTACCTTTATCAAACTCTTGCCGAAGACAATTCCGAGACCGGGCT
AACATTTTTCTGGTATTCTCATCT back to topprotein sequence of jgi.p|Nanoce1779_2|599752 >mRNA_7714-protein ID=mRNA_7714-protein|Name=jgi.p|Nanoce1779_2|599752|organism=Nannochloropsis oceanica|type=polypeptide|length=430bp
MCDSLLADWARLRDKQRQNTEVTLRLVDRVSVAVEEVATATASTTSRGPP
SPTSLDDVIPQLVQQHKTYHAALSKFIKAVDRIFLEAKPPVVMCRPSVTL
DPRLIDEMVALHLYREGRTCTAAKLVEEAGLSSAALRFEAHEALARVHKV
ITAAIERRELGPACRWAAEHHEGLQRLGSNLEFQLARLQFLVLLTRDNVC
NARWKETEVVKMEDAKDEEEEGKSKHERGRKRIRDDVALTFARQHLAPFA
VAGGGHMEQVRTLMGCLLYAGRLDRSPYQDLLSPELWEEAMEALHTEGCR
LLGLPVESPLSVCYRASLRALGPLAKMRQVVQNSTGDWEGLEELPGEIDL
GGKPSLRFHSVFSCPVTREQASWANPPMMLKCGHVICRSSLARLMKGGHG
HNGGHPQQRFKCFVCPVEQYPQDAQQLYF* back to topmRNA from alignment at scaffold_21:149457..152963- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7714 ID=mRNA_7714|Name=jgi.p|Nanoce1779_2|599752|organism=Nannochloropsis oceanica|type=mRNA|length=3507bp|location=Sequence derived from alignment at scaffold_21:149457..152963- (Nannochloropsis oceanica)
GTATTTTATGTATTTGCCGACAATGTGCATTTATTCTTTGTGTGTTTATC
CTATTTACGTCCTTAACAGTTTCTTTCGATTTATTTTATGTTGTCGCATT
TGTTTTTACCACGCATGCATCGTCGGTTCAAACCACGTACATCGGTGTGA
CATCACGACAGCATGGGCCACAGCCCGCCAAAAGCTCTCCAGTCGCCCGG
GCTTTATTCGGTTCCATGACACTTCTGGCAAAAGGGGCTCATGGACTCAA
CAATTGTCTGGGGAGAGCCTAGGCTCGACTAAGATGTCAAGACGCGAATG
CCAAGTCAACTGTGTTACTCGCCTTCCTCCCAGTCGACCTCGTCCTCGTC
CTCGTCCTCTTGCTCTTCGCCTACCTCCCTCTTGACTGCCGCTACCGATT
CTCGAACCCCTCCACCCTCCTTCCTATAATTATCTTCCCCCAACTCTTTT
TGTAACGCTTCGACGTACGCCCGCCGGTAAGCCTCGATTCGCTCGGCCTC
GGTTATTACCTCCACCTCTCTCTTTGGCAGCTGATTGCCCCCACTATCAT
TGAAGCCTTCGCCCCGACTCACTTGCTGTGCACTTCCCGCAGCTTGTTCG
AGATGGTCAGTGTCCTCCTTGATGACACGACTGCCCTGCAAAAAGGATGG
CTGGGCCCGGGCAGTCCGCAACACATTCAGCATCGATTCGCCCATCGTTT
CCTCGTCCGCCTGGATGCCACCATCCCGCGTGGAGGCGGCCAGGTCTTCG
AAGATGCCGGCCGACCCCCCGCCCGGATGATTTCCCATCCCTCCACACCA
GCCTCCACGTCGGCGCCTCCGAATTTCGTCCTCCTCGCTCTGGCCGCCGC
CCACACCCACAGCAAGGAGCTCGCTAGGCAGGTTGCTTGGCAATGGCTTT
TGCTCCAAGGAAGATAGCAAGTTGTAGATGCCGTCGTGTGAGGCTGCGCT
GGTTTCGTCTGTGGCAATGTACATCTGAGTGCGTAACTTATCTTTGAGTG
CCTGGACTTCTTCGAACCCCGTCACGCCTGTCTTTGGCCGAAGCTGAAAC
CTGATGCCGTCACAGGTGGAGTGCATTTCATTGTTGCAGCAGGTAGGACA
GCAAAACCCATACCGTTGGTTGCGCAACGGTTGCACCTCTAAGAGCGGTA
GTGTGCGGCCGCAGTGAGGACATTCGTATGTTTGGTTGTCATTGGCCTCC
CGCTCCATTCGCTCTAACTCCCGGTGCATGAGGTGGACCCGGTACCGCAC
CACGTTGGTAAAGTGAGAAAAATCTATATAGTAGTATAATTCCCGTTTCC
CCGTCGACTCATCTAGCACGTCTTCAGTCCGGATCAAGTGCTCCTCCAAT
AACTCCGTGAGCAGGCGCCGTGCTTGCTTGGCCCCCACGCCCAGACGTGT
CTCCATATCAGTGTCTCTCAAATGACGGTCTCGGAGCAAGGCCTCCAGCA
CCACTATTGTATCGTCCGCATAAAAGGCCTGCGCCACGGCCCGCACTAAT
CGCGTCGCCAGGTCGATGGGCGTCTCGATCCCCGTCAAAATGTTTCCACT
GGTGTTGATGCCGCCGTCTCCTCCTCTGGCCCCGCCACCAACCCCTCCGC
TGTGCAGCATCGCGTAGAAAAAAGTGGCTGAAGCCGGCAAAGCCTTACCT
GGACAGCCTGGAAGTCACGCAGGCCGAAAGTGTTTCGTAACTTTGCCCCC
CTCCTCCCCACAGCCACCTGTATGTTGCGGTATATGATGGTGAGTGGATC
GAGTGAAAATGAGCTGGGGTGCAGCGCCCTCTTTCTTTCTTCTCCAGGGT
CCATATTGACATGACACATGACACAAAGGCTCTCCCGACAAGCTCATGCC
ACAACAACCTCAGCCTCCTCTTTTATCCATTTATACAGGAAACATCCACC
CATGGAGGGCTAGAAAGGCAGCCACCTCCCTCCTGCATCGTACAGCTTAC
ATCATTATTGCACGCCTCGTACTAACAAACTATAGCCTAGCTATGTGTGA
CAGCCTGCTCGCGGACTGGGCACGGCTCCGGGATAAACAGCGCCAGAATA
CGGAGGTAACGTTGCGGTTGGTGGACAGGGTGAGCGTGGCTGTGGAAGAA
GTTGCCACAGCGACAGCATCCACGACCTCCCGCGGTCCTCCTTCCCCAAC
CTCCCTCGATGATGTCATTCCGCAGCTGGTCCAGCAGCACAAGACCTACC
ACGCTGCCCTTTCCAAATTCATCAAGGCCGTGGACCGGATCTTTCTAGAG
GCCAAACCACCAGTCGTAATGTGCCGCCCCTCCGTAACTCTGGATCCTCG
CCTGATTGATGAGATGGTGGCCTTGCACCTCTACCGCGAAGGAAGGACGT
GCACCGCCGCCAAGCTCGTGGAAGAAGCGGGTCTTTCATCAGCGGCACTT
CGATTTGAAGCGCACGAAGCATTGGCTCGTGTACATAAAGTGATCACTGC
GGCGATTGAGCGCCGAGAGTTGGGACCGGCTTGTCGGTGGGCGGCAGAGC
ATCACGAGGGGTTGCAGCGACTGGGAAGCAACCTGGAGTTTCAGCTTGCG
CGACTCCAGTTCCTCGTACTGTTGACTAGGGATAATGTCTGTAATGCCAG
ATGGAAAGAGACAGAGGTTGTAAAGATGGAAGACGCCAAGGATGAGGAGG
AAGAGGGGAAGAGCAAACATGAGCGGGGACGGAAGCGGATCCGAGATGAC
GTGGCTTTGACTTTTGCACGACAGCACCTCGCCCCTTTCGCCGTAGCCGG
CGGCGGCCACATGGAGCAAGTGCGGACGCTGATGGGATGTCTGCTCTATG
CGGGCCGCCTTGACCGTTCACCCTACCAGGACTTGCTCTCGCCGGAGTTG
TGGGAGGAAGCCATGGAGGCGCTGCACACGGAAGGCTGTCGCTTGCTCGG
CCTACCGGTAGAAAGCCCGTTGAGTGTGTGCTATCGCGCCAGTCTGCGGG
CGCTTGGACCCTTGGCGAAGATGCGACAGGTGGTGCAGAATAGCACGGGG
GATTGGGAGGGGCTGGAGGAGTTGCCGGGGGAGATCGACCTTGGGGGGAA
ACCCTCCCTGCGGTTTCACAGCGTCTTTTCTTGTCCTGTCACGAGGGAGC
AGGCCAGTTGGGCGAATCCTCCCATGATGCTCAAATGTGGGCATGTCATT
TGCCGCAGTAGCCTCGCAAGGCTGATGAAGGGCGGGCATGGGCACAACGG
CGGGCATCCGCAGCAGCGGTTCAAGTGCTTTGTGTGCCCGGTGGAGCAGT
ACCCGCAGGACGCACAGCAGCTGTACTTTTGAAGTGAGAGAAAGAGAGGA
AAAACGAGATAGAAGAAGCGAGAAAAAACGATATATGACGATACATGACC
TGTATAGACCATCACTGAAGAAGAAAGTGGAAGAACACTTAAAGACGGGA
TAATCATGATGCCTCTTCCCCCTACCCCCTTTTATCCTGTACCTTTATCA
AACTCTTGCCGAAGACAATTCCGAGACCGGGCTAACATTTTTCTGGTATT
CTCATCT back to topCoding sequence (CDS) from alignment at scaffold_21:149457..152963- >mRNA_7714 ID=mRNA_7714|Name=jgi.p|Nanoce1779_2|599752|organism=Nannochloropsis oceanica|type=CDS|length=1290bp|location=Sequence derived from alignment at scaffold_21:149457..152963- (Nannochloropsis oceanica)
ATGTGTGACAGCCTGCTCGCGGACTGGGCACGGCTCCGGGATAAACAGCG
CCAGAATACGGAGGTAACGTTGCGGTTGGTGGACAGGGTGAGCGTGGCTG
TGGAAGAAGTTGCCACAGCGACAGCATCCACGACCTCCCGCGGTCCTCCT
TCCCCAACCTCCCTCGATGATGTCATTCCGCAGCTGGTCCAGCAGCACAA
GACCTACCACGCTGCCCTTTCCAAATTCATCAAGGCCGTGGACCGGATCT
TTCTAGAGGCCAAACCACCAGTCGTAATGTGCCGCCCCTCCGTAACTCTG
GATCCTCGCCTGATTGATGAGATGGTGGCCTTGCACCTCTACCGCGAAGG
AAGGACGTGCACCGCCGCCAAGCTCGTGGAAGAAGCGGGTCTTTCATCAG
CGGCACTTCGATTTGAAGCGCACGAAGCATTGGCTCGTGTACATAAAGTG
ATCACTGCGGCGATTGAGCGCCGAGAGTTGGGACCGGCTTGTCGGTGGGC
GGCAGAGCATCACGAGGGGTTGCAGCGACTGGGAAGCAACCTGGAGTTTC
AGCTTGCGCGACTCCAGTTCCTCGTACTGTTGACTAGGGATAATGTCTGT
AATGCCAGATGGAAAGAGACAGAGGTTGTAAAGATGGAAGACGCCAAGGA
TGAGGAGGAAGAGGGGAAGAGCAAACATGAGCGGGGACGGAAGCGGATCC
GAGATGACGTGGCTTTGACTTTTGCACGACAGCACCTCGCCCCTTTCGCC
GTAGCCGGCGGCGGCCACATGGAGCAAGTGCGGACGCTGATGGGATGTCT
GCTCTATGCGGGCCGCCTTGACCGTTCACCCTACCAGGACTTGCTCTCGC
CGGAGTTGTGGGAGGAAGCCATGGAGGCGCTGCACACGGAAGGCTGTCGC
TTGCTCGGCCTACCGGTAGAAAGCCCGTTGAGTGTGTGCTATCGCGCCAG
TCTGCGGGCGCTTGGACCCTTGGCGAAGATGCGACAGGTGGTGCAGAATA
GCACGGGGGATTGGGAGGGGCTGGAGGAGTTGCCGGGGGAGATCGACCTT
GGGGGGAAACCCTCCCTGCGGTTTCACAGCGTCTTTTCTTGTCCTGTCAC
GAGGGAGCAGGCCAGTTGGGCGAATCCTCCCATGATGCTCAAATGTGGGC
ATGTCATTTGCCGCAGTAGCCTCGCAAGGCTGATGAAGGGCGGGCATGGG
CACAACGGCGGGCATCCGCAGCAGCGGTTCAAGTGCTTTGTGTGCCCGGT
GGAGCAGTACCCGCAGGACGCACAGCAGCTGTACTTTTGA back to top
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