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Properties
Property Name | Value |
TranscriptId | 599826 |
Track | FilteredModels2 |
ProteinId | 599740 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_21 | supercontig | scaffold_21:136471..140363 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7710 ID=mRNA_7710|Name=jgi.p|Nanoce1779_2|599740|organism=Nannochloropsis oceanica|type=mRNA|length=3893bp ACAGCCATGACGGGTAGGAGAAGTGGTGTACCGGTTTTCCTGGTATATTC ATGTGCTCCCTTGCTTCTTCTCCTCCTTCTCGCCTCATCCCCAGTCGTAC ACGCCTTCCGCCCCGTCAGTCGTAATCCAAAGTGCTACCAGCAACGCACC CGTGCACAAATGGCCATCACGATGGCAACAGACAATACCCTGGAAACAGA AGTCTTAATTGTTGGCGTGGGTCCTGCGGGAGTATCGCTTGCTGCGGACC TGGAGCGTCGAGGCATCATCGATTACCTCCTGGTCGAGAAGGCAAGCTCA CCGCGTGAAGGGGGCACAGCAATAGGCTTTTGGACTAATGCCTGGCGGTG CTTGGAGAGCTTGGGGGTGGCGGAGGGATTGCGAAAATCTTATTTACAAG GCGAACGCGTGCGTATTGGAACTGGCCAAGAAGGCAAGGAACTGACGAGC TTTAGCCTGGAAGAGTGCGATGGAGGGCCACATGAATTCCGGTACATTAT GCGTAGCGACCTGTTACGCCAACTTTTGAAAATTGTGCCCAAGCAACGAG TGGCATATAACAAGGCCGTGGTGGGGTTTCGGGAGGATAAGGGAGAAGGA GTGGTAATAGCCGAGTTGTCTTGCGGGCAAAAGATCCGATGCAAAGCTTT GGTGGGGGCGGACGGCGTAGGGAGTACGGTGCACAAATTACTTTTTCCCG GACAAAAGCTGGCCAACTATGCCGGTTATCAGGCCATTCGTGGTGTGGCC ACGATATCAAAAAGTGGCAGCTTACCCCCCTTCTTCACGTTTGAAAGAGG GGTGGTAAATCAAGTGTGGGGCGCTGGCGTGCGGCTTGGTACCTTTCGAA TGACGGAGACGAGCCTGTATTGGTTTGTGACGTACAATGACCAGCAGCGT GAAGCAGGCCGCGACGATGATGGTGCAGAATTGCTGCAGAAAGTTCGAAG CCTGCTTGCTGGGTGGGATGCACGGTGGGGCATTGACACAATTCTTAAAA ATACACCCGCGCAAGACGTGCTTCGCACTAGCATCGGCGACAGATGGCCA AAGCCTTTGGGTAATTGGGGTCAAGGCCGCGTGACACTGCTAGGGGATGC TGCCCATCCCATGACGCCCAATCTGGGCCAGGGCGGGGCGGCTGGCATGG AGGATGCCTTAGTGCTCGGAGAGCTCTTAGTAGCTGCCTTGGACAAGGGC GACGTGGGGGCGGAGACGGTTCCTCAAGCCTTGCGAGCCTACGAAAAGGA ACGTGGGCGCCGCATCACATACCTGACGCTCAAATCATTTATCTTTGGGT TTTTACTCCAAATACCGTACTCGCCCGTCACCTTTGTTAGGGACAATTTG GCCCTTCCCTTGGTTTTCAAACCGCGGTCGTTCTTATCCCACACAAAATT CGAGGCACCACCTCTTCCAAGCAAAGTGGAGAAGAAAAAAAGGCGTATGT TTCCCCTCATGTAAATTAGTAGATGAAGGGATGTGATTATGATTGAAAGA AATTCAACCCTTGAGACAAGCCACACGTCCCGTTTTCCCAAAGGCCTCTA GTGCTAGTGATAAAAAAAAAGACTTTTGCCAGATGATTCCATCACACTTG AAAGCTGGTAATAAAGTTTTATTACCGGTAGCAGCGAAATGACACGGAGG GCGCGTACACACACGTTTCCACGGCGTGCCCACCCGAGTCACCCACGGAC TTGGAATTTTCAGAATCGGTGGGTGGCTCGAAATCGGGTTTGTTCCCCTT CAGAAATACGTGCGTGTCAGACATCCGGCCTCGTGCTTCACTTAAATGTT ATAAGTAAAAACACGCGTCAAATCGCACCTATCCTCGACGTTTTCGATAA AGACGGTGCTGGACCTCGTGCTCTTCTTGGGGGAGGGAAACGATCGGAGA TGCTCCAGGAGTCCCGCTCCGCATACGCCCTCCTCGCTCCATTTTCTCTC GTCGTGTTTTTATTGTCACCACTGTGTCTTTGATATTGCTCACAGATCTT GACCGAAGCTATGATCACAAGGTCACAGCTGTCATAGCGTAGAGCCTCAC GTTCCGTCCTTTCCGTAACACATCCAATACCTTACCAAGGAGAGGCCCCA AGCCACCAGTGGGCCGTACACGTCACAGTGACGCCTACAATAGGGGACCA AGCTGCAATGCGAGTGCTGCAGCGGGGAGACGAACTCTACGCCGAGACCG GCATTTCCTAGAGGATCCGTGGACGCCACCTAGTCTCTTGTGTTCAGTGG TCAACTCCAAGCGTCATCATCTCCATCAGCAAGGGCCTCGATCCTGTACG CCGCCACCCATTGTCGTTGCAGCAGGCCAACTCCAAGCATCGTTCCCGAC GCCTCCACACCAGACCACCTAGCTTGCCTTGATATAAGTCAATATTTGAC ACGGATATCATGAATGAAGCCGCCAGGCCCTTACTGTCTGGTAAGGCAGT CACGACTCTCGTTACCCCACCCTTGTCCCCACGCAAGGATCATCAAATTG GTACCGCAGCATTGGCTGCCTTGATATTCTTCAGCGTTAGTGGTGGGCCC TTCGGAATGGAAGAATGCGTGTTGGCAGGAGGCCCTCTTCTGAGCATGGT TGGCCTTGTCGTGCTTCCCGTGCTTTGGTCAGCACCGGAGGCCCTTATTA CCGCGGAACTCGCCCCTGCCTTCCCTGAAAGCGCAGGGTCAGTGGCGTGG GTGGAGGCAGCCTTTGGCCCCTTTTGGGGTTGGATGAAAGGCTTTCTTTC TTGGCTCAGTGGCGTGACGGACAACGCACTGTATCCCGTCCTTATCTGCG ACTACCTGGTCTCGTTCTTTGAAAAGGAAGCCGAGGTAATTGGCGTCGCC CACGGGATCCACCGCGTCTTGCTCTTGCTAGGCCTGACGCTGGTGCTCAC GTACCTCAACTGGCGCGGGTTGGACGTGGTGGGTAATGCGGCTATTTTAT TGATGGGACTATGTATGCTGCCGTTTGTCGTGATGTGTGTCGCGGGCATC ATCCAGTACCAGAGCCTTGATTTTACGCGGCTGGGCCAGTTACCCGAAGG AGGATGGGGGGCCGTGCAATGGTCGAGCATTCTCAACATTTTATTTTGGC AACTCAACTATTGGGACTCTGTTTCCACCTTTGCAGGCGATGTCAAGGAC CCCGGCCATGCCTTTCCACGGGCCCTGGCCGTTGCACTGTTTGTGGTGGT GCTTAGCACCCTCCTCCCGCTAGCCGTCGCCGTGGCGGGCACGACTTTTT CGTACAGTGATTATACGGACGGGTTCTTCGGGAAGATTGGCACGGCTTTG GTGGGAAAGTGGCTGGGGGTGATGGTTGCGCTGGCGGCGGCCTTGTCGTC GGTGGGCATGTTTGAGGCAGAGATGGCAAGCGATGCCTTCTCGCTCATGG GCATGGCGGAGCGAGGGCATCTCCCTGCACTCTTTGCCCAGCGCTCACGG CACGGAACGCCTACTGCTGCCATTTTATGTTCCGCTCTCGGTATCGCTTT CTTGGCGACCATGTCCTTTTTGGAAATACTGGAAGTGCTGAACTTTTTGT ACATGCTGGCCATGCTGATTGAGTTTGGCGCCTTTGTTCGCCTGCGCGTG TCGCGGCCTCTAATGCGTCGGCCATACCGTATCCCGCTCGGCACGGCTGG AGTGAGCGTGATGTTGACGGGGCCCGTGGTCTTGTTGGTCTGCATGATGG CCATGGCTCCTCTGAAAGCTTGGGCCATCTGCGGGGTGGCTGTGATGGTG GGATGTGGGTTGTACTTTGCCCTGCACCACCCTGCCACGCGCCGGTGTTG CGTCTTTTTGCAGGATCCATTTGAAGCTTCGAGTGCCACAGCGGGTGCAT GGGAGCCCCTAATGGTCGTGCAGGTTTACGGGACAGACGTAGT back to topprotein sequence of jgi.p|Nanoce1779_2|599740 >mRNA_7710-protein ID=mRNA_7710-protein|Name=jgi.p|Nanoce1779_2|599740|organism=Nannochloropsis oceanica|type=polypeptide|length=486bp MTGRRSGVPVFLVYSCAPLLLLLLLASSPVVHAFRPVSRNPKCYQQRTRA QMAITMATDNTLETEVLIVGVGPAGVSLAADLERRGIIDYLLVEKASSPR EGGTAIGFWTNAWRCLESLGVAEGLRKSYLQGERVRIGTGQEGKELTSFS LEECDGGPHEFRYIMRSDLLRQLLKIVPKQRVAYNKAVVGFREDKGEGVV IAELSCGQKIRCKALVGADGVGSTVHKLLFPGQKLANYAGYQAIRGVATI SKSGSLPPFFTFERGVVNQVWGAGVRLGTFRMTETSLYWFVTYNDQQREA GRDDDGAELLQKVRSLLAGWDARWGIDTILKNTPAQDVLRTSIGDRWPKP LGNWGQGRVTLLGDAAHPMTPNLGQGGAAGMEDALVLGELLVAALDKGDV GAETVPQALRAYEKERGRRITYLTLKSFIFGFLLQIPYSPVTFVRDNLAL PLVFKPRSFLSHTKFEAPPLPSKVEKKKRRMFPLM* back to topmRNA from alignment at scaffold_21:136471..140363- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7710 ID=mRNA_7710|Name=jgi.p|Nanoce1779_2|599740|organism=Nannochloropsis oceanica|type=mRNA|length=3893bp|location=Sequence derived from alignment at scaffold_21:136471..140363- (Nannochloropsis oceanica) ACAGCCATGACGGGTAGGAGAAGTGGTGTACCGGTTTTCCTGGTATATTC
ATGTGCTCCCTTGCTTCTTCTCCTCCTTCTCGCCTCATCCCCAGTCGTAC
ACGCCTTCCGCCCCGTCAGTCGTAATCCAAAGTGCTACCAGCAACGCACC
CGTGCACAAATGGCCATCACGATGGCAACAGACAATACCCTGGAAACAGA
AGTCTTAATTGTTGGCGTGGGTCCTGCGGGAGTATCGCTTGCTGCGGACC
TGGAGCGTCGAGGCATCATCGATTACCTCCTGGTCGAGAAGGCAAGCTCA
CCGCGTGAAGGGGGCACAGCAATAGGCTTTTGGACTAATGCCTGGCGGTG
CTTGGAGAGCTTGGGGGTGGCGGAGGGATTGCGAAAATCTTATTTACAAG
GCGAACGCGTGCGTATTGGAACTGGCCAAGAAGGCAAGGAACTGACGAGC
TTTAGCCTGGAAGAGTGCGATGGAGGGCCACATGAATTCCGGTACATTAT
GCGTAGCGACCTGTTACGCCAACTTTTGAAAATTGTGCCCAAGCAACGAG
TGGCATATAACAAGGCCGTGGTGGGGTTTCGGGAGGATAAGGGAGAAGGA
GTGGTAATAGCCGAGTTGTCTTGCGGGCAAAAGATCCGATGCAAAGCTTT
GGTGGGGGCGGACGGCGTAGGGAGTACGGTGCACAAATTACTTTTTCCCG
GACAAAAGCTGGCCAACTATGCCGGTTATCAGGCCATTCGTGGTGTGGCC
ACGATATCAAAAAGTGGCAGCTTACCCCCCTTCTTCACGTTTGAAAGAGG
GGTGGTAAATCAAGTGTGGGGCGCTGGCGTGCGGCTTGGTACCTTTCGAA
TGACGGAGACGAGCCTGTATTGGTTTGTGACGTACAATGACCAGCAGCGT
GAAGCAGGCCGCGACGATGATGGTGCAGAATTGCTGCAGAAAGTTCGAAG
CCTGCTTGCTGGGTGGGATGCACGGTGGGGCATTGACACAATTCTTAAAA
ATACACCCGCGCAAGACGTGCTTCGCACTAGCATCGGCGACAGATGGCCA
AAGCCTTTGGGTAATTGGGGTCAAGGCCGCGTGACACTGCTAGGGGATGC
TGCCCATCCCATGACGCCCAATCTGGGCCAGGGCGGGGCGGCTGGCATGG
AGGATGCCTTAGTGCTCGGAGAGCTCTTAGTAGCTGCCTTGGACAAGGGC
GACGTGGGGGCGGAGACGGTTCCTCAAGCCTTGCGAGCCTACGAAAAGGA
ACGTGGGCGCCGCATCACATACCTGACGCTCAAATCATTTATCTTTGGGT
TTTTACTCCAAATACCGTACTCGCCCGTCACCTTTGTTAGGGACAATTTG
GCCCTTCCCTTGGTTTTCAAACCGCGGTCGTTCTTATCCCACACAAAATT
CGAGGCACCACCTCTTCCAAGCAAAGTGGAGAAGAAAAAAAGGCGTATGT
TTCCCCTCATGTAAATTAGTAGATGAAGGGATGTGATTATGATTGAAAGA
AATTCAACCCTTGAGACAAGCCACACGTCCCGTTTTCCCAAAGGCCTCTA
GTGCTAGTGATAAAAAAAAAGACTTTTGCCAGATGATTCCATCACACTTG
AAAGCTGGTAATAAAGTTTTATTACCGGTAGCAGCGAAATGACACGGAGG
GCGCGTACACACACGTTTCCACGGCGTGCCCACCCGAGTCACCCACGGAC
TTGGAATTTTCAGAATCGGTGGGTGGCTCGAAATCGGGTTTGTTCCCCTT
CAGAAATACGTGCGTGTCAGACATCCGGCCTCGTGCTTCACTTAAATGTT
ATAAGTAAAAACACGCGTCAAATCGCACCTATCCTCGACGTTTTCGATAA
AGACGGTGCTGGACCTCGTGCTCTTCTTGGGGGAGGGAAACGATCGGAGA
TGCTCCAGGAGTCCCGCTCCGCATACGCCCTCCTCGCTCCATTTTCTCTC
GTCGTGTTTTTATTGTCACCACTGTGTCTTTGATATTGCTCACAGATCTT
GACCGAAGCTATGATCACAAGGTCACAGCTGTCATAGCGTAGAGCCTCAC
GTTCCGTCCTTTCCGTAACACATCCAATACCTTACCAAGGAGAGGCCCCA
AGCCACCAGTGGGCCGTACACGTCACAGTGACGCCTACAATAGGGGACCA
AGCTGCAATGCGAGTGCTGCAGCGGGGAGACGAACTCTACGCCGAGACCG
GCATTTCCTAGAGGATCCGTGGACGCCACCTAGTCTCTTGTGTTCAGTGG
TCAACTCCAAGCGTCATCATCTCCATCAGCAAGGGCCTCGATCCTGTACG
CCGCCACCCATTGTCGTTGCAGCAGGCCAACTCCAAGCATCGTTCCCGAC
GCCTCCACACCAGACCACCTAGCTTGCCTTGATATAAGTCAATATTTGAC
ACGGATATCATGAATGAAGCCGCCAGGCCCTTACTGTCTGGTAAGGCAGT
CACGACTCTCGTTACCCCACCCTTGTCCCCACGCAAGGATCATCAAATTG
GTACCGCAGCATTGGCTGCCTTGATATTCTTCAGCGTTAGTGGTGGGCCC
TTCGGAATGGAAGAATGCGTGTTGGCAGGAGGCCCTCTTCTGAGCATGGT
TGGCCTTGTCGTGCTTCCCGTGCTTTGGTCAGCACCGGAGGCCCTTATTA
CCGCGGAACTCGCCCCTGCCTTCCCTGAAAGCGCAGGGTCAGTGGCGTGG
GTGGAGGCAGCCTTTGGCCCCTTTTGGGGTTGGATGAAAGGCTTTCTTTC
TTGGCTCAGTGGCGTGACGGACAACGCACTGTATCCCGTCCTTATCTGCG
ACTACCTGGTCTCGTTCTTTGAAAAGGAAGCCGAGGTAATTGGCGTCGCC
CACGGGATCCACCGCGTCTTGCTCTTGCTAGGCCTGACGCTGGTGCTCAC
GTACCTCAACTGGCGCGGGTTGGACGTGGTGGGTAATGCGGCTATTTTAT
TGATGGGACTATGTATGCTGCCGTTTGTCGTGATGTGTGTCGCGGGCATC
ATCCAGTACCAGAGCCTTGATTTTACGCGGCTGGGCCAGTTACCCGAAGG
AGGATGGGGGGCCGTGCAATGGTCGAGCATTCTCAACATTTTATTTTGGC
AACTCAACTATTGGGACTCTGTTTCCACCTTTGCAGGCGATGTCAAGGAC
CCCGGCCATGCCTTTCCACGGGCCCTGGCCGTTGCACTGTTTGTGGTGGT
GCTTAGCACCCTCCTCCCGCTAGCCGTCGCCGTGGCGGGCACGACTTTTT
CGTACAGTGATTATACGGACGGGTTCTTCGGGAAGATTGGCACGGCTTTG
GTGGGAAAGTGGCTGGGGGTGATGGTTGCGCTGGCGGCGGCCTTGTCGTC
GGTGGGCATGTTTGAGGCAGAGATGGCAAGCGATGCCTTCTCGCTCATGG
GCATGGCGGAGCGAGGGCATCTCCCTGCACTCTTTGCCCAGCGCTCACGG
CACGGAACGCCTACTGCTGCCATTTTATGTTCCGCTCTCGGTATCGCTTT
CTTGGCGACCATGTCCTTTTTGGAAATACTGGAAGTGCTGAACTTTTTGT
ACATGCTGGCCATGCTGATTGAGTTTGGCGCCTTTGTTCGCCTGCGCGTG
TCGCGGCCTCTAATGCGTCGGCCATACCGTATCCCGCTCGGCACGGCTGG
AGTGAGCGTGATGTTGACGGGGCCCGTGGTCTTGTTGGTCTGCATGATGG
CCATGGCTCCTCTGAAAGCTTGGGCCATCTGCGGGGTGGCTGTGATGGTG
GGATGTGGGTTGTACTTTGCCCTGCACCACCCTGCCACGCGCCGGTGTTG
CGTCTTTTTGCAGGATCCATTTGAAGCTTCGAGTGCCACAGCGGGTGCAT
GGGAGCCCCTAATGGTCGTGCAGGTTTACGGGACAGACGTAGT back to topCoding sequence (CDS) from alignment at scaffold_21:136471..140363- >mRNA_7710 ID=mRNA_7710|Name=jgi.p|Nanoce1779_2|599740|organism=Nannochloropsis oceanica|type=CDS|length=1458bp|location=Sequence derived from alignment at scaffold_21:136471..140363- (Nannochloropsis oceanica) ATGACGGGTAGGAGAAGTGGTGTACCGGTTTTCCTGGTATATTCATGTGC TCCCTTGCTTCTTCTCCTCCTTCTCGCCTCATCCCCAGTCGTACACGCCT TCCGCCCCGTCAGTCGTAATCCAAAGTGCTACCAGCAACGCACCCGTGCA CAAATGGCCATCACGATGGCAACAGACAATACCCTGGAAACAGAAGTCTT AATTGTTGGCGTGGGTCCTGCGGGAGTATCGCTTGCTGCGGACCTGGAGC GTCGAGGCATCATCGATTACCTCCTGGTCGAGAAGGCAAGCTCACCGCGT GAAGGGGGCACAGCAATAGGCTTTTGGACTAATGCCTGGCGGTGCTTGGA GAGCTTGGGGGTGGCGGAGGGATTGCGAAAATCTTATTTACAAGGCGAAC GCGTGCGTATTGGAACTGGCCAAGAAGGCAAGGAACTGACGAGCTTTAGC CTGGAAGAGTGCGATGGAGGGCCACATGAATTCCGGTACATTATGCGTAG CGACCTGTTACGCCAACTTTTGAAAATTGTGCCCAAGCAACGAGTGGCAT ATAACAAGGCCGTGGTGGGGTTTCGGGAGGATAAGGGAGAAGGAGTGGTA ATAGCCGAGTTGTCTTGCGGGCAAAAGATCCGATGCAAAGCTTTGGTGGG GGCGGACGGCGTAGGGAGTACGGTGCACAAATTACTTTTTCCCGGACAAA AGCTGGCCAACTATGCCGGTTATCAGGCCATTCGTGGTGTGGCCACGATA TCAAAAAGTGGCAGCTTACCCCCCTTCTTCACGTTTGAAAGAGGGGTGGT AAATCAAGTGTGGGGCGCTGGCGTGCGGCTTGGTACCTTTCGAATGACGG AGACGAGCCTGTATTGGTTTGTGACGTACAATGACCAGCAGCGTGAAGCA GGCCGCGACGATGATGGTGCAGAATTGCTGCAGAAAGTTCGAAGCCTGCT TGCTGGGTGGGATGCACGGTGGGGCATTGACACAATTCTTAAAAATACAC CCGCGCAAGACGTGCTTCGCACTAGCATCGGCGACAGATGGCCAAAGCCT TTGGGTAATTGGGGTCAAGGCCGCGTGACACTGCTAGGGGATGCTGCCCA TCCCATGACGCCCAATCTGGGCCAGGGCGGGGCGGCTGGCATGGAGGATG CCTTAGTGCTCGGAGAGCTCTTAGTAGCTGCCTTGGACAAGGGCGACGTG GGGGCGGAGACGGTTCCTCAAGCCTTGCGAGCCTACGAAAAGGAACGTGG GCGCCGCATCACATACCTGACGCTCAAATCATTTATCTTTGGGTTTTTAC TCCAAATACCGTACTCGCCCGTCACCTTTGTTAGGGACAATTTGGCCCTT CCCTTGGTTTTCAAACCGCGGTCGTTCTTATCCCACACAAAATTCGAGGC ACCACCTCTTCCAAGCAAAGTGGAGAAGAAAAAAAGGCGTATGTTTCCCC TCATGTAA back to top
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