jgi.p|Nanoce1779_2|632426, mRNA_7690 (mRNA) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|632426
Unique NamemRNA_7690
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length5567
Alignment locationscaffold_21:96701..102763 +

Link to JBrowse

Properties
Property NameValue
TranscriptId632512
TrackFilteredModels2
ProteinId632426
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_21supercontigscaffold_21:96701..102763 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|632426gene_7690Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|632426mRNA_7690-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS_7690CDS_7690Nannochloropsis oceanica (N. oceanica CCMP1779)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>mRNA_7690 ID=mRNA_7690|Name=jgi.p|Nanoce1779_2|632426|organism=Nannochloropsis oceanica|type=mRNA|length=5567bp
ATGATGGGGGGAGCTGCTTTTGCGCGGGAAGCCCAATTTAGGTCGACTTA
GGCAGGGTAATGACATTCTACACAAGCATTTCTAGTTACAGGCATTGTCT
ACATCGTGCGCAAGACAAGCAGGGGGGTGGCAGGCAGTGCCAATGCTCAG
TGTATTCCAATTGATTATGAGAAATGGAGGGGGGAGGCAAAAAGGGAGGT
GCAGGGCCCGCCAGGACGAAACGCCCACACGACTGCAACACGACACTCAT
CGGCAGCACAAGCAAACACAGGGGCACTCTTATCAATGCATGAAGATATT
TCGGTAGCTTCCGTAGGAGAAGGCGCGTCGCGGCGGGTGAAGCGTCCTTT
TGGGCTTGCGTCGACTTTCCCGCCCCGGCTTACGCTGTCCTTTTCATTCT
ACCCTCCCGTTCCATCCAGCACAGAAGTCGACATAAAGCGCCAAGCCCAC
GTCCACATAGGCTCGGCTCATCGCACACCTCACATGGAGGAGGAGAGGGA
GGGTTCGCAGCTTCCTACCTGGCGCCTTTGCGCACGCAAATGCATCCCTC
CTTACCCTCCTCCTGCCCCCTCAGCGGAGCCTGGCTAACCGTACAACGTA
TTCACACTCAGTATGTCTCACACATAAATACGCACCCATTGCACTACAGG
CAGCAGCACTGCGAGACCGAACAGCACTAGCCGGCTTTCGAAGTAGCGCC
GGCCCTTGCCCTCCGCTTCTTTCTTCTCTCAAGCAGGACCTGCACCGGTA
CTTACCGCCCTTCCCACCCCAGCACCATGTTCTTCGCCTCGAGCCTCCTG
ACAAAGAAGGGGCCTCTAGGCAAGGTCTGGCTGGCGGCTCATTGGGACAA
AAAGCTGACCAAAATGCAGGTTTTCCAGACAGACATCACCAAGTCCGTTG
ACTCCATTGTCCATCCCACCGTCCCCCTCGCCCTCCGCGTCTCCGGCCAC
CTCCTCCTTGGCGTGGTCCGCATTTACTCCCGCAAAGTAAAGTACCTGAT
GGAGGACTGCTCCCAGGCCTTGACCAAGATCAAGATGGCCTTTCGTCCGG
GTATCGTTGACCTGCCCATAGGCGCCTCGGAGGCACCGCTGGCCTCGATC
AACGTCCAAAACTTCGGTCAGTTCGACCAGGACCTGCTGGACTTCGCGGC
CTTCCAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGTGTTTGGAGGTGGGG
GATTTGAGGGAGGGGTGGAGGGAGGATTGTCGACGTTGAATGCATTGCCG
ATAGCAGATCAGTGGGTGGCGGCGGCCACGCAGACGCTGGCGAGAAGGGA
GAGGATTACCTTGCACGATGAGGGAGGGAGGGAGGGAGGGGGGGAGGGAG
GGAGAGGTTTGTTGGAACAGAGTTCAATGTTCGACCCGGAGGTGGAGTTG
GAGGACTGGGGTCCCTTCGATCCCTTGGATGAGACGATGGGAGGGAGGGA
GGGAGGGGTTGAAGGAGGGGGGGAGACAAGTTTCGAGGATGACAGTGGGA
GGTACAGCGACGTCGAGTTGGGGCGAGACGCGGACGGGAGTCGGAGGCGG
TCGTCCTTGAAGAGGGGGAGGGCGAGTTTGGAGGTGGGGGAGGCAGGGAA
AGAGGGAGGGAAGGAGAGAGTGTCGGATTACGGGATGGGAGGGAAAGAGG
GAGGAAGGGAGGGGGGGGAGGAGCCGTATTATGAGGAGCCGGGTGACATG
ATGTTCATGCAGGATGATATGCCGCCACCCATGGAGGAGGAGGAGTTGGA
GAAAGAGGGGACGGAAGGGGAGGGATGGAGGGAGGGAGCGCGGGGAGGGG
GGTCGTTTGGATTGTCGGACTTGTCGTTCGGAGATTCCATGGAGGGAGGA
GGACGAGAAGCAGCACGAGCAGCAGCAGCGGCGGAGGACGAGATGGTGAT
GCTGGGACCGGACAGCCAAATGAAGCAACAGCAGCAGCAGCAGCAGCGGA
AGAAGAAGAAGCCGCGGCTGTTGCGGTTGGACGCCACTACCATTTTGTCG
ACTGCTCAGATCAAAGCCCAGCTGCAGGAGTACCACGACATCTGCTTGCC
TCGCGTCCGACCCCGCGACCGGGTCCGCCGGGCAGGAAGGCGGGAGGGAG
GGCGGGCGGGGAGGGCGGCGGCGATGGAGGCAGTGGAGCTTCGGATGAAG
GTGCCGACGTTGGAGGGACTGTCTGAGGACCTCCGGGAGGTGTTCCGATT
GACGATGGTGGTTGGGGAGATGACAGAGATGGGGGTGGCGAAGAGGGCGG
AGGGAGGGAGGGGAGAAGGAGGGGAAATTGAGCAGACGCGAGCCGGGGAG
GGAGGGAGGAGGGAGACGGTAGAGGAAGAGGGAAGGGATTCGCTGCTGTT
GGCGGGGGAGGCGGTCGGGAGGATGAGCAAGGGGATGGAGGAAAGGGAAG
AGGGGGGAGGGGAAGGGATGAGGACGGGATGGAGGGGAGATGAGGAGATG
ATGATGATGCAGGACGGGGATGATTTTCGGATGGACGATGAGGAGTACTT
GCCGCTTCCTCCTTCCTCGGAAGGAGGGGAGGAGGAGGGAGCTTTCCAGC
CGCCATCGGTGAGCAAGCGTCGATCTAGTGGGATGGGGTTTGAGGAGGAT
GTGATGATGGGCATGGAGGCGAAGGGGGAGGGGGGGGAGGAGGACGAGGA
AGAAGAAGGTGGGATTAAGGCGCGCTTGCGTCAGCCTCGAGGGCAGGGCG
AGGTGGAGGAAGAGGTAAACTTTGTGTGGCACCCCAACACGGTCAAGATT
CTGACCTTCCTCCGCCGGCAGCTCAGGGGGAAGGAGGGGAGGAAGAGGGG
AGTGACGCTGCAAACGTTGGCAGCGGAGGCATCGAGGGCGAACGTGGCCA
AGTTCTTTTGGGAGCTGCTGCAGTTGAAGACGTGGGATTTTGTGCAGTTG
GAGCAGCGAATGGCGTACGGGGATATCATTATCTTGCCGGGGAGGCGGTT
TCGAGAGGCGATTAAGGTGGAGAGGGAGGAGGAGGAGGAGGAGCAGGAGG
AGAGAGGCCCAGAGGAGGAGGAAAGTGTGGCGGCGTAGGGTGGTGGTGGG
ATGAAAAAGAAGTGGAAAGGGAGGACGGAGGAGGGAGGAGGCTCTTTTTG
ACCGTGATACTCGGGTGATGGGTTTGTTCTTTACAGAAATGGCAAGGGGG
AGGAGGGTGAGGTGACAACGAGAAGGAGAAAATAAGAAAAGGAAGAAGAA
GAAGAAGAGTGAGAAGACGACGACGAAGACGGCGAAAAAGAGAGTGTGAT
GTGTTTCACCGTTCATTCTTCATGTGAATAATACGTAGGTACGCGTGTCG
GCCTAACCCAACTGCAGCAAGAAAAGCAAAGCAATCAACAACGATCGAGG
AGCGATGAGAAGAAGAGAGACCAGATGGTCTTTGGACGGGAAACGCCTGA
ATGGGCCGGGCCGCTCAACGGATGTGCGAGGAGGGAGGGATGCGGGACGA
GGTAGGGATGTGTGGCTGGACGCCTTCCATAACGATGACCAGGAGCAGGA
GCAGGAGCAGGAGGAAGAGGACGAGAGCAGGAGTAGCAGAGGCAGGAGCA
GAAGATGGGAGAGGAGGAAGAAGAGGGAGACAGAAATGCAAGGAAAGGAA
GAAAGGCTTTCATATGAGATGCAGAGACAGGGAAACGAAAGAAATGACAG
AAACAAGGAAAGGAAAGTGATGGCTAACCCCCAGTACGGGCAATGGGCAG
ATCTATCCCATCTCCTATCAAATACTTGAAGCAACACGCGCGAAACTTCA
TCACAATGGCGACTGACAAGTGTGCCGTGGCAGTAATAGTAGCAACCGCG
GCAGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCGATAGCAAGAAG
GCAATGGCAATCCTTCCATAACGACAGCGACAAACATTCCCCCCCAAAAA
AAAGTTAGACTACAAACGACCAAAAATCATAACTCACTCTCTCATCAATT
TCTACTATTTTGTTCCGCCTGTCCGTGTCCCTCTCATTTCCTCCCCTTCT
CCGATCCTCCCTCCCTCCCACACCCCTCTGCAATCCGTACGACATCATGC
ACATACGCCTCCTGCGGCATGCCCACCAAAACACCGCTCAACTGCCTCGG
TATCTTCTCTAGCAACCACCTCAGCGCATACTCGTGCAACAACCCGCCTC
CCTCCCTCCCTCTCTCTTTCCCTTCCTCTAATACGTGTCCCGCCGTTTTA
CAAGCCTCCACGGCCCGAACCGCTGCGTGGTACCTAACCATCTCTCCATA
CTTCACAAAAAAAACCTGCAAAGCATCAGCTGCGCTCTCATCCAAACTCT
CGAACGTCGAGGCAATCAAAGGTATGATCCTCCTTTCCAACTCTTGGGTG
TAAGACTCGGTCGATGTGAATGAAGTCAATTGCCTATTCATGTCTCGGAT
CAACTCCTGTATAATGCGACACCCTTCCCTCGTCTCCTTCTCCTCCTCCG
TCAATGCCTCCTCGGCCTTCCCCTCAAATAAAAAAGAGGGATTAAATAGC
TCCAAAGCCGTGCGACACGCTTCCATGTATCCCTCCGGTGGCTCCCCACC
CGCTGCTGCCTTGTTCACTAGCCGATATAACCCTCCCTGTGACACAGCCG
TCAGTGGCCGATTCGCGTACACTTCAATCCCCTTCGCTCGTGCCTGCGCC
GCTACCACCAACCCGCCCGGCTCAAGGAGATTCAAGGGCAATTGAATCGC
ACGCAGGGAGGGGGCATTTTTCCCCGCACGTTTGGCTCCCTCGGCCGCTG
CATCAAGAACCATGGACAAGGAGAGGTGCAGCCCTTCCTTAGAGCTAAGC
CCAAAACCATTACTGCTCACCCCGTAGCCTTTCCGGATTTTCCCTCTTGC
CACAGCACCTTCAAGGGCTTCGAACGCTCGAACAAGGCGATCTTTAAGCT
TGTGACGCTCTTCTTGCATGGCTGCTGCTAAACCCTTGTCGTCCGCGAAG
CTCCTTTCCCCCGTCTCATGCCGTAGCAGAATGTCCGCCAGAAAGTGCTC
GGGGTTATGAACATACAGCAAATCCACGGCTTCGAGCTGGAGGCGCTCCA
AGGAGCCCTTCAATTCGTGCTCCATCACCTCTGGGTGCAATGAAAACTGC
AACCCACCCTCGTCCTTGCTCCCCACCGACACGCGCTCTGGCCCCCGCGC
GTGCCCTTCAGCCGGCTGGAAATACCCAAATTTCGTGCAGACAGTTACTT
CGTCCCGGCATTCGGCGCCTGTCTCTTGAAAGTGTTTGGCCAATGCTTGT
CCTACCGCCCGCTCCGAAGCTCCGATATGTCCATAGTTAGGTGCTGTATC
AAAGAGCCGAATGCCGTGCTTGAGGGCAGCGGCAAGGGCTTGGAGGTGAG
GCGGGCTGGGCGTGATGCGGGCGCAGCCAAAGCCAATGCGGCGGATGCCT
ATAGCTGCCGCTGCTGTTGCTGCTGCCGATGCGGGGGCCATGTTGTGATC
TGCCTTCCCTTTTTCCTATTTTGCTCGACTTGTTCGATGATACGACGACC
TCCTGCTTCTCTTCTTTGTGCTGCTCGCTCTGCTTCTGCTGACCTTGGCC
TGGACGTAGCTCCTGTT
back to top

protein sequence of jgi.p|Nanoce1779_2|632426

>mRNA_7690-protein ID=mRNA_7690-protein|Name=jgi.p|Nanoce1779_2|632426|organism=Nannochloropsis oceanica|type=polypeptide|length=754bp
MFFASSLLTKKGPLGKVWLAAHWDKKLTKMQVFQTDITKSVDSIVHPTVP
LALRVSGHLLLGVVRIYSRKVKYLMEDCSQALTKIKMAFRPGIVDLPIGA
SEAPLASINVQNFGQFDQDLLDFAAFQGGREGGREGVFGGGGFEGGVEGG
LSTLNALPIADQWVAAATQTLARRERITLHDEGGREGGGEGGRGLLEQSS
MFDPEVELEDWGPFDPLDETMGGREGGVEGGGETSFEDDSGRYSDVELGR
DADGSRRRSSLKRGRASLEVGEAGKEGGKERVSDYGMGGKEGGREGGEEP
YYEEPGDMMFMQDDMPPPMEEEELEKEGTEGEGWREGARGGGSFGLSDLS
FGDSMEGGGREAARAAAAAEDEMVMLGPDSQMKQQQQQQQRKKKKPRLLR
LDATTILSTAQIKAQLQEYHDICLPRVRPRDRVRRAGRREGGRAGRAAAM
EAVELRMKVPTLEGLSEDLREVFRLTMVVGEMTEMGVAKRAEGGRGEGGE
IEQTRAGEGGRRETVEEEGRDSLLLAGEAVGRMSKGMEEREEGGGEGMRT
GWRGDEEMMMMQDGDDFRMDDEEYLPLPPSSEGGEEEGAFQPPSVSKRRS
SGMGFEEDVMMGMEAKGEGGEEDEEEEGGIKARLRQPRGQGEVEEEVNFV
WHPNTVKILTFLRRQLRGKEGRKRGVTLQTLAAEASRANVAKFFWELLQL
KTWDFVQLEQRMAYGDIIILPGRRFREAIKVEREEEEEEQEERGPEEEES
VAA*
back to top

mRNA from alignment at scaffold_21:96701..102763+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7690 ID=mRNA_7690|Name=jgi.p|Nanoce1779_2|632426|organism=Nannochloropsis oceanica|type=mRNA|length=6063bp|location=Sequence derived from alignment at scaffold_21:96701..102763+ (Nannochloropsis oceanica)
ATGATGGGGGGAGCTGCTTTTGCGCGGGAAGCCCAATTTAGGTCGACTTA GGCAGGGTAATGACATTCTACACAAGCATTTCTAGTTACAGGCATTGTCT ACATCGTGCGCAAGACAAGCAGGGGGGTGGCAGGCAGTGCCAATGCTCAG TGTATTCCAATTGATTATGAGAAATGGAGGGGGGAGGCAAAAAGGGAGGT GCAGGGCCCGCCAGGACGAAACGCCCACACGACTGCAACACGACACTCAT CGGCAGCACAAGCAAACACAGGGGCACTCTTATCAATGCATGAAGATATT TCGGTAGCTTCCGTAGGAGAAGGCGCGTCGCGGCGGGTGAAGCGTCCTTT TGGGCTTGCGTCGACTTTCCCGCCCCGGCTTACGCTGTCCTTTTCATTCT ACCCTCCCGTTCCATCCAGCACAGAAGTCGACATAAAGCGCCAAGCCCAC GTCCACATAGGCTCGGCTCATCGCACACCTCACATGGAGGAGGAGAGGGA GGGTTCGCAGCTTCCTACCTGGCGCCTTTGCGCACGCAAATGCATCCCTC CTTACCCTCCTCCTGCCCCCTCAGCGGAGCCTGGCTAACCGTACAACGTA TTCACACTCAGTATGTCTCACACATAAATACGCACCCATTGCACTACAGG CAGCAGCACTGCGAGACCGAACAGCACTAGCCGGCTTTCGAAGTAGCGCC GGCCCTTGCCCTCCGCTTCTTTCTTCTCTCAAGCAGGACCTGCACCGGTA CTTACCGCCCTTCCCACCCCAGCACCATGTTCTTCGCCTCGAGCCTCCTG ACAAAGAAGGGGCCTCTAGGCAAGGTCTGGCTGGCGGCTCATTGGGACAA AAAGCTGACCAAAATGCAGGTTTTCCAGACAGACATCACCAAGTCCGTTG GTACGTACCCCTCCCTACCTCCTTCCGTTCCTCCTGCCCTCCCTCTCTCC TCCGTCCCCCCTCTCTCATTGAGAGACTAAATTTCGGCAGTCATCTCCTT CTACCAACGACTCTTATGTTCTTCTTTCTCCATCCTTGTGGTCTTGTTCC TCCTGTCATTCCCTACCTCCTGTCACCAGCTCCCTTTCCTCCCTCCCCCC CTCCCTCCCTCCAGACTCCATTGTCCATCCCACCGTCCCCCTCGCCCTCC GCGTCTCCGGCCACCTCCTCCTTGGCGTGGTCCGCATTTACTCCCGCAAA GTAAAGTACCTGATGGAGGACTGCTCCCAGGCCTTGACCAAGATCAAGAT GGTACGTGCCCTCCACCCCGCCTTCCTTACCTCCCTCCCCCTCTCGTCCC CTGGCGATCCATTTCTTGAGACTTGTGTCTCGATCCGTCCCTCCTTTCCT TCGTTCCTTCCCTCCCCTCTCCCCTGATTTCCTCCAGTACGCCTTTTGTC CGGGCATGGGGGCCATGTCTAGAGGGGCTTCTGTCTCGATTGCATCAACG ACCAATACCTAGTCCACTCATTTGACCCCTCCCTGCCTCCCTGCCTGCCT GCCTTCCTCCCTCCCTCCCTCCTCTTGCTATAGGCCTTTCGTCCGGGTAT CGTTGACCTGCCCATAGGCGCCTCGGAGGCACCGCTGGCCTCGATCAACG TCCAAAACTTCGGTCAGTTCGACCAGGACCTGCTGGACTTCGCGGCCTTC CAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGTGTTTGGAGGTGGGGGATT TGAGGGAGGGGTGGAGGGAGGATTGTCGACGTTGAATGCATTGCCGATAG CAGATCAGTGGGTGGCGGCGGCCACGCAGACGCTGGCGAGAAGGGAGAGG ATTACCTTGCACGATGAGGGAGGGAGGGAGGGAGGGGGGGAGGGAGGGAG AGGTTTGTTGGAACAGAGTTCAATGTTCGACCCGGAGGTGGAGTTGGAGG ACTGGGGTCCCTTCGATCCCTTGGATGAGACGATGGGAGGGAGGGAGGGA GGGGTTGAAGGAGGGGGGGAGACAAGTTTCGAGGATGACAGTGGGAGGTA CAGCGACGTCGAGTTGGGGCGAGACGCGGACGGGAGTCGGAGGCGGTCGT CCTTGAAGAGGGGGAGGGCGAGTTTGGAGGTGGGGGAGGCAGGGAAAGAG GGAGGGAAGGAGAGAGTGTCGGATTACGGGATGGGAGGGAAAGAGGGAGG AAGGGAGGGGGGGGAGGAGCCGTATTATGAGGAGCCGGGTGACATGATGT TCATGCAGGATGATATGCCGCCACCCATGGAGGAGGAGGAGTTGGAGAAA GAGGGGACGGAAGGGGAGGGATGGAGGGAGGGAGCGCGGGGAGGGGGGTC GTTTGGATTGTCGGACTTGTCGTTCGGAGATTCCATGGAGGGAGGAGGAC GAGAAGCAGCACGAGCAGCAGCAGCGGCGGAGGACGAGATGGTGATGCTG GGACCGGACAGCCAAATGAAGCAACAGCAGCAGCAGCAGCAGCGGAAGAA GAAGAAGCCGCGGCTGTTGCGGTTGGACGCCACTACCATTTTGTCGACTG CTCAGATCAAAGCCCAGCTGCAGGAGTACCACGACATCTGCTTGCCTCGC GTCCGACCCCGCGACCGGGTCCGCCGGGCAGGAAGGCGGGAGGGAGGGCG GGCGGGGAGGGCGGCGGCGATGGAGGCAGTGGAGCTTCGGATGAAGGTGC CGACGTTGGAGGGACTGTCTGAGGACCTCCGGGAGGTGTTCCGATTGACG ATGGTGGTTGGGGAGATGACAGAGATGGGGGTGGCGAAGAGGGCGGAGGG AGGGAGGGGAGAAGGAGGGGAAATTGAGCAGACGCGAGCCGGGGAGGGAG GGAGGAGGGAGACGGTAGAGGAAGAGGGAAGGGATTCGCTGCTGTTGGCG GGGGAGGCGGTCGGGAGGATGAGCAAGGGGATGGAGGAAAGGGAAGAGGG GGGAGGGGAAGGGATGAGGACGGGATGGAGGGGAGATGAGGAGATGATGA TGATGCAGGACGGGGATGATTTTCGGATGGACGATGAGGAGTACTTGCCG CTTCCTCCTTCCTCGGAAGGAGGGGAGGAGGAGGGAGCTTTCCAGCCGCC ATCGGTGAGCAAGCGTCGATCTAGTGGGATGGGGTTTGAGGAGGATGTGA TGATGGGCATGGAGGCGAAGGGGGAGGGGGGGGAGGAGGACGAGGAAGAA GAAGGTGGGATTAAGGCGCGCTTGCGTCAGCCTCGAGGGCAGGGCGAGGT GGAGGAAGAGGTAAACTTTGTGTGGCACCCCAACACGGTCAAGATTCTGA CCTTCCTCCGCCGGCAGCTCAGGGGGAAGGAGGGGAGGAAGAGGGGAGTG ACGCTGCAAACGTTGGCAGCGGAGGCATCGAGGGCGAACGTGGCCAAGTT CTTTTGGGAGCTGCTGCAGTTGAAGACGTGGGATTTTGTGCAGTTGGAGC AGCGAATGGCGTACGGGGATATCATTATCTTGCCGGGGAGGCGGTTTCGA GAGGCGATTAAGGTGGAGAGGGAGGAGGAGGAGGAGGAGCAGGAGGAGAG AGGCCCAGAGGAGGAGGAAAGTGTGGCGGCGTAGGGTGGTGGTGGGATGA AAAAGAAGTGGAAAGGGAGGACGGAGGAGGGAGGAGGCTCTTTTTGACCG TGATACTCGGGTGATGGGTTTGTTCTTTACAGAAATGGCAAGGGGGAGGA GGGTGAGGTGACAACGAGAAGGAGAAAATAAGAAAAGGAAGAAGAAGAAG AAGAGTGAGAAGACGACGACGAAGACGGCGAAAAAGAGAGTGTGATGTGT TTCACCGTTCATTCTTCATGTGAATAATACGTAGGTACGCGTGTCGGCCT AACCCAACTGCAGCAAGAAAAGCAAAGCAATCAACAACGATCGAGGAGCG ATGAGAAGAAGAGAGACCAGATGGTCTTTGGACGGGAAACGCCTGAATGG GCCGGGCCGCTCAACGGATGTGCGAGGAGGGAGGGATGCGGGACGAGGTA GGGATGTGTGGCTGGACGCCTTCCATAACGATGACCAGGAGCAGGAGCAG GAGCAGGAGGAAGAGGACGAGAGCAGGAGTAGCAGAGGCAGGAGCAGAAG ATGGGAGAGGAGGAAGAAGAGGGAGACAGAAATGCAAGGAAAGGAAGAAA GGCTTTCATATGAGATGCAGAGACAGGGAAACGAAAGAAATGACAGAAAC AAGGAAAGGAAAGTGATGGCTAACCCCCAGTACGGGCAATGGGCAGATCT ATCCCATCTCCTATCAAATACTTGAAGCAACACGCGCGAAACTTCATCAC AATGGCGACTGACAAGTGTGCCGTGGCAGTAATAGTAGCAACCGCGGCAG CAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCGATAGCAAGAAGGCAA TGGCAATCCTTCCATAACGACAGCGACAAACATTCCCCCCCAAAAAAAAG TTAGACTACAAACGACCAAAAATCATAACTCACTCTCTCATCAATTTCTA CTATTTTGTTCCGCCTGTCCGTGTCCCTCTCATTTCCTCCCCTTCTCCGA TCCTCCCTCCCTCCCACACCCCTCTGCAATCCGTACGACATCATGCACAT ACGCCTCCTGCGGCATGCCCACCAAAACACCGCTCAACTGCCTCGGTATC TTCTCTAGCAACCACCTCAGCGCATACTCGTGCAACAACCCGCCTCCCTC CCTCCCTCTCTCTTTCCCTTCCTCTAATACGTGTCCCGCCGTTTTACAAG CCTCCACGGCCCGAACCGCTGCGTGGTACCTAACCATCTCTCCATACTTC ACAAAAAAAACCTGCAAAGCATCAGCTGCGCTCTCATCCAAACTCTCGAA CGTCGAGGCAATCAAAGGTATGATCCTCCTTTCCAACTCTTGGGTGTAAG ACTCGGTCGATGTGAATGAAGTCAATTGCCTATTCATGTCTCGGATCAAC TCCTGTATAATGCGACACCCTTCCCTCGTCTCCTTCTCCTCCTCCGTCAA TGCCTCCTCGGCCTTCCCCTCAAATAAAAAAGAGGGATTAAATAGCTCCA AAGCCGTGCGACACGCTTCCATGTATCCCTCCGGTGGCTCCCCACCCGCT GCTGCCTTGTTCACTAGCCGATATAACCCTCCCTGTGACACAGCCGTCAG TGGCCGATTCGCGTACACTTCAATCCCCTTCGCTCGTGCCTGCGCCGCTA CCACCAACCCGCCCGGCTCAAGGAGATTCAAGGGCAATTGAATCGCACGC AGGGAGGGGGCATTTTTCCCCGCACGTTTGGCTCCCTCGGCCGCTGCATC AAGAACCATGGACAAGGAGAGGTGCAGCCCTTCCTTAGAGCTAAGCCCAA AACCATTACTGCTCACCCCGTAGCCTTTCCGGATTTTCCCTCTTGCCACA GCACCTTCAAGGGCTTCGAACGCTCGAACAAGGCGATCTTTAAGCTTGTG ACGCTCTTCTTGCATGGCTGCTGCTAAACCCTTGTCGTCCGCGAAGCTCC TTTCCCCCGTCTCATGCCGTAGCAGAATGTCCGCCAGAAAGTGCTCGGGG TTATGAACATACAGCAAATCCACGGCTTCGAGCTGGAGGCGCTCCAAGGA GCCCTTCAATTCGTGCTCCATCACCTCTGGGTGCAATGAAAACTGCAACC CACCCTCGTCCTTGCTCCCCACCGACACGCGCTCTGGCCCCCGCGCGTGC CCTTCAGCCGGCTGGAAATACCCAAATTTCGTGCAGACAGTTACTTCGTC CCGGCATTCGGCGCCTGTCTCTTGAAAGTGTTTGGCCAATGCTTGTCCTA CCGCCCGCTCCGAAGCTCCGATATGTCCATAGTTAGGTGCTGTATCAAAG AGCCGAATGCCGTGCTTGAGGGCAGCGGCAAGGGCTTGGAGGTGAGGCGG GCTGGGCGTGATGCGGGCGCAGCCAAAGCCAATGCGGCGGATGCCTATAG CTGCCGCTGCTGTTGCTGCTGCCGATGCGGGGGCCATGTTGTGATCTGCC TTCCCTTTTTCCTATTTTGCTCGACTTGTTCGATGATACGACGACCTCCT GCTTCTCTTCTTTGTGCTGCTCGCTCTGCTTCTGCTGACCTTGGCCTGGA CGTAGCTCCTGTT
back to top

Coding sequence (CDS) from alignment at scaffold_21:96701..102763+

>mRNA_7690 ID=mRNA_7690|Name=jgi.p|Nanoce1779_2|632426|organism=Nannochloropsis oceanica|type=CDS|length=6786bp|location=Sequence derived from alignment at scaffold_21:96701..102763+ (Nannochloropsis oceanica)
ATGTTCTTCGCCTCGAGCCTCCTGACAAAGAAGGGGCCTCTAGGCAAGGT
CTGGCTGGCGGCTCATTGGGACAAAAAGCTGACCAAAATGCAGGTTTTCC
AGACAGACATCACCAAGTCCGTTGACTCCATTGTCCATCCCACCGTCCCC
CTCGCCCTCCGCGTCTCCGGCCACCTCCTCCTTGGCGTGGTCCGCATTTA
CTCCCGCAAAGTAAAGTACCTGATGGAGGACTGCTCCCAGGCCTTGACCA
AGATCAAGATGGCCTTTCGTCCGGGTATCGTTGACCTGCCCATAGGCGCC
TCGGAGGCACCGCTGGCCTCGATCAACGTCCAAAACTTCGGTCAGTTCGA
CCAGGACCTGCTGGACTTCGCGGCCTTCCAAGGAGGGAGGGAGGGAGGGA
GGGAGGGAGTGTTTGGAGGTGGGGGATTTGAGGGAGGGGTGGAGGGAGGA
TTGTCGACGTTGAATGCATTGCCGATAGCAGATCAGTGGGTGGCGGCGGC
CACGCAGACGCTGGCGAGAAGGGAGAGGATTACCTTGCACGATGAGGGAG
GGAGGGAGGGAGGGGGGGAGGGAGGGAGAGGTTTGTTGGAACAGAGTTCA
ATGTTCGACCCGGAGGTGGAGTTGGAGGACTGGGGTCCCTTCGATCCCTT
GGATGAGACGATGGGAGGGAGGGAGGGAGGGGTTGAAGGAGGGGGGGAGA
CAAGTTTCGAGGATGACAGTGGGAGGTACAGCGACGTCGAGTTGGGGCGA
GACGCGGACGGGAGTCGGAGGCGGTCGTCCTTGAAGAGGGGGAGGGCGAG
TTTGGAGGTGGGGGAGGCAGGGAAAGAGGGAGGGAAGGAGAGAGTGTCGG
ATTACGGGATGGGAGGGAAAGAGGGAGGAAGGGAGGGGGGGGAGGAGCCG
TATTATGAGGAGCCGGGTGACATGATGTTCATGCAGGATGATATGCCGCC
ACCCATGGAGGAGGAGGAGTTGGAGAAAGAGGGGACGGAAGGGGAGGGAT
GGAGGGAGGGAGCGCGGGGAGGGGGGTCGTTTGGATTGTCGGACTTGTCG
TTCGGAGATTCCATGGAGGGAGGAGGACGAGAAGCAGCACGAGCAGCAGC
AGCGGCGGAGGACGAGATGGTGATGCTGGGACCGGACAGCCAAATGAAGC
AACAGCAGCAGCAGCAGCAGCGGAAGAAGAAGAAGCCGCGGCTGTTGCGG
TTGGACGCCACTACCATTTTGTCGACTGCTCAGATCAAAGCCCAGCTGCA
GGAGTACCACGACATCTGCTTGCCTCGCGTCCGACCCCGCGACCGGGTCC
GCCGGGCAGGAAGGCGGGAGGGAGGGCGGGCGGGGAGGGCGGCGGCGATG
GAGGCAGTGGAGCTTCGGATGAAGGTGCCGACGTTGGAGGGACTGTCTGA
GGACCTCCGGGAGGTGTTCCGATTGACGATGGTGGTTGGGGAGATGACAG
AGATGGGGGTGGCGAAGAGGGCGGAGGGAGGGAGGGGAGAAGGAGGGGAA
ATTGAGCAGACGCGAGCCGGGGAGGGAGGGAGGAGGGAGACGGTAGAGGA
AGAGGGAAGGGATTCGCTGCTGTTGGCGGGGGAGGCGGTCGGGAGGATGA
GCAAGGGGATGGAGGAAAGGGAAGAGGGGGGAGGGGAAGGGATGAGGACG
GGATGGAGGGGAGATGAGGAGATGATGATGATGCAGGACGGGGATGATTT
TCGGATGGACGATGAGGAGTACTTGCCGCTTCCTCCTTCCTCGGAAGGAG
GGGAGGAGGAGGGAGCTTTCCAGCCGCCATCGGTGAGCAAGCGTCGATCT
AGTGGGATGGGGTTTGAGGAGGATGTGATGATGGGCATGGAGGCGAAGGG
GGAGGGGGGGGAGGAGGACGAGGAAGAAGAAGGTGGGATTAAGGCGCGCT
TGCGTCAGCCTCGAGGGCAGGGCGAGGTGGAGGAAGAGGTAAACTTTGTG
TGGCACCCCAACACGGTCAAGATTCTGACCTTCCTCCGCCGGCAGCTCAG
GGGGAAGGAGGGGAGGAAGAGGGGAGTGACGCTGCAAACGTTGGCAGCGG
AGGCATCGAGGGCGAACGTGGCCAAGTTCTTTTGGGAGCTGCTGCAGTTG
AAGACGTGGGATTTTGTGCAGTTGGAGCAGCGAATGGCGTACGGGGATAT
CATTATCTTGCCGGGGAGGCGGTTTCGAGAGGCGATTAAGGTGGAGAGGG
AGGAGGAGGAGGAGGAGCAGGAGGAGAGAGGCCCAGAGGAGGAGGAAAGT
GTGGCGGCGTAGATGTTCTTCGCCTCGAGCCTCCTGACAAAGAAGGGGCC
TCTAGGCAAGGTCTGGCTGGCGGCTCATTGGGACAAAAAGCTGACCAAAA
TGCAGGTTTTCCAGACAGACATCACCAAGTCCGTTGACTCCATTGTCCAT
CCCACCGTCCCCCTCGCCCTCCGCGTCTCCGGCCACCTCCTCCTTGGCGT
GGTCCGCATTTACTCCCGCAAAGTAAAGTACCTGATGGAGGACTGCTCCC
AGGCCTTGACCAAGATCAAGATGGCCTTTCGTCCGGGTATCGTTGACCTG
CCCATAGGCGCCTCGGAGGCACCGCTGGCCTCGATCAACGTCCAAAACTT
CGGTCAGTTCGACCAGGACCTGCTGGACTTCGCGGCCTTCCAAGGAGGGA
GGGAGGGAGGGAGGGAGGGAGTGTTTGGAGGTGGGGGATTTGAGGGAGGG
GTGGAGGGAGGATTGTCGACGTTGAATGCATTGCCGATAGCAGATCAGTG
GGTGGCGGCGGCCACGCAGACGCTGGCGAGAAGGGAGAGGATTACCTTGC
ACGATGAGGGAGGGAGGGAGGGAGGGGGGGAGGGAGGGAGAGGTTTGTTG
GAACAGAGTTCAATGTTCGACCCGGAGGTGGAGTTGGAGGACTGGGGTCC
CTTCGATCCCTTGGATGAGACGATGGGAGGGAGGGAGGGAGGGGTTGAAG
GAGGGGGGGAGACAAGTTTCGAGGATGACAGTGGGAGGTACAGCGACGTC
GAGTTGGGGCGAGACGCGGACGGGAGTCGGAGGCGGTCGTCCTTGAAGAG
GGGGAGGGCGAGTTTGGAGGTGGGGGAGGCAGGGAAAGAGGGAGGGAAGG
AGAGAGTGTCGGATTACGGGATGGGAGGGAAAGAGGGAGGAAGGGAGGGG
GGGGAGGAGCCGTATTATGAGGAGCCGGGTGACATGATGTTCATGCAGGA
TGATATGCCGCCACCCATGGAGGAGGAGGAGTTGGAGAAAGAGGGGACGG
AAGGGGAGGGATGGAGGGAGGGAGCGCGGGGAGGGGGGTCGTTTGGATTG
TCGGACTTGTCGTTCGGAGATTCCATGGAGGGAGGAGGACGAGAAGCAGC
ACGAGCAGCAGCAGCGGCGGAGGACGAGATGGTGATGCTGGGACCGGACA
GCCAAATGAAGCAACAGCAGCAGCAGCAGCAGCGGAAGAAGAAGAAGCCG
CGGCTGTTGCGGTTGGACGCCACTACCATTTTGTCGACTGCTCAGATCAA
AGCCCAGCTGCAGGAGTACCACGACATCTGCTTGCCTCGCGTCCGACCCC
GCGACCGGGTCCGCCGGGCAGGAAGGCGGGAGGGAGGGCGGGCGGGGAGG
GCGGCGGCGATGGAGGCAGTGGAGCTTCGGATGAAGGTGCCGACGTTGGA
GGGACTGTCTGAGGACCTCCGGGAGGTGTTCCGATTGACGATGGTGGTTG
GGGAGATGACAGAGATGGGGGTGGCGAAGAGGGCGGAGGGAGGGAGGGGA
GAAGGAGGGGAAATTGAGCAGACGCGAGCCGGGGAGGGAGGGAGGAGGGA
GACGGTAGAGGAAGAGGGAAGGGATTCGCTGCTGTTGGCGGGGGAGGCGG
TCGGGAGGATGAGCAAGGGGATGGAGGAAAGGGAAGAGGGGGGAGGGGAA
GGGATGAGGACGGGATGGAGGGGAGATGAGGAGATGATGATGATGCAGGA
CGGGGATGATTTTCGGATGGACGATGAGGAGTACTTGCCGCTTCCTCCTT
CCTCGGAAGGAGGGGAGGAGGAGGGAGCTTTCCAGCCGCCATCGGTGAGC
AAGCGTCGATCTAGTGGGATGGGGTTTGAGGAGGATGTGATGATGGGCAT
GGAGGCGAAGGGGGAGGGGGGGGAGGAGGACGAGGAAGAAGAAGGTGGGA
TTAAGGCGCGCTTGCGTCAGCCTCGAGGGCAGGGCGAGGTGGAGGAAGAG
GTAAACTTTGTGTGGCACCCCAACACGGTCAAGATTCTGACCTTCCTCCG
CCGGCAGCTCAGGGGGAAGGAGGGGAGGAAGAGGGGAGTGACGCTGCAAA
CGTTGGCAGCGGAGGCATCGAGGGCGAACGTGGCCAAGTTCTTTTGGGAG
CTGCTGCAGTTGAAGACGTGGGATTTTGTGCAGTTGGAGCAGCGAATGGC
GTACGGGGATATCATTATCTTGCCGGGGAGGCGGTTTCGAGAGGCGATTA
AGGTGGAGAGGGAGGAGGAGGAGGAGGAGCAGGAGGAGAGAGGCCCAGAG
GAGGAGGAAAGTGTGGCGGCGTAGATGTTCTTCGCCTCGAGCCTCCTGAC
AAAGAAGGGGCCTCTAGGCAAGGTCTGGCTGGCGGCTCATTGGGACAAAA
AGCTGACCAAAATGCAGGTTTTCCAGACAGACATCACCAAGTCCGTTGAC
TCCATTGTCCATCCCACCGTCCCCCTCGCCCTCCGCGTCTCCGGCCACCT
CCTCCTTGGCGTGGTCCGCATTTACTCCCGCAAAGTAAAGTACCTGATGG
AGGACTGCTCCCAGGCCTTGACCAAGATCAAGATGGCCTTTCGTCCGGGT
ATCGTTGACCTGCCCATAGGCGCCTCGGAGGCACCGCTGGCCTCGATCAA
CGTCCAAAACTTCGGTCAGTTCGACCAGGACCTGCTGGACTTCGCGGCCT
TCCAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGTGTTTGGAGGTGGGGGA
TTTGAGGGAGGGGTGGAGGGAGGATTGTCGACGTTGAATGCATTGCCGAT
AGCAGATCAGTGGGTGGCGGCGGCCACGCAGACGCTGGCGAGAAGGGAGA
GGATTACCTTGCACGATGAGGGAGGGAGGGAGGGAGGGGGGGAGGGAGGG
AGAGGTTTGTTGGAACAGAGTTCAATGTTCGACCCGGAGGTGGAGTTGGA
GGACTGGGGTCCCTTCGATCCCTTGGATGAGACGATGGGAGGGAGGGAGG
GAGGGGTTGAAGGAGGGGGGGAGACAAGTTTCGAGGATGACAGTGGGAGG
TACAGCGACGTCGAGTTGGGGCGAGACGCGGACGGGAGTCGGAGGCGGTC
GTCCTTGAAGAGGGGGAGGGCGAGTTTGGAGGTGGGGGAGGCAGGGAAAG
AGGGAGGGAAGGAGAGAGTGTCGGATTACGGGATGGGAGGGAAAGAGGGA
GGAAGGGAGGGGGGGGAGGAGCCGTATTATGAGGAGCCGGGTGACATGAT
GTTCATGCAGGATGATATGCCGCCACCCATGGAGGAGGAGGAGTTGGAGA
AAGAGGGGACGGAAGGGGAGGGATGGAGGGAGGGAGCGCGGGGAGGGGGG
TCGTTTGGATTGTCGGACTTGTCGTTCGGAGATTCCATGGAGGGAGGAGG
ACGAGAAGCAGCACGAGCAGCAGCAGCGGCGGAGGACGAGATGGTGATGC
TGGGACCGGACAGCCAAATGAAGCAACAGCAGCAGCAGCAGCAGCGGAAG
AAGAAGAAGCCGCGGCTGTTGCGGTTGGACGCCACTACCATTTTGTCGAC
TGCTCAGATCAAAGCCCAGCTGCAGGAGTACCACGACATCTGCTTGCCTC
GCGTCCGACCCCGCGACCGGGTCCGCCGGGCAGGAAGGCGGGAGGGAGGG
CGGGCGGGGAGGGCGGCGGCGATGGAGGCAGTGGAGCTTCGGATGAAGGT
GCCGACGTTGGAGGGACTGTCTGAGGACCTCCGGGAGGTGTTCCGATTGA
CGATGGTGGTTGGGGAGATGACAGAGATGGGGGTGGCGAAGAGGGCGGAG
GGAGGGAGGGGAGAAGGAGGGGAAATTGAGCAGACGCGAGCCGGGGAGGG
AGGGAGGAGGGAGACGGTAGAGGAAGAGGGAAGGGATTCGCTGCTGTTGG
CGGGGGAGGCGGTCGGGAGGATGAGCAAGGGGATGGAGGAAAGGGAAGAG
GGGGGAGGGGAAGGGATGAGGACGGGATGGAGGGGAGATGAGGAGATGAT
GATGATGCAGGACGGGGATGATTTTCGGATGGACGATGAGGAGTACTTGC
CGCTTCCTCCTTCCTCGGAAGGAGGGGAGGAGGAGGGAGCTTTCCAGCCG
CCATCGGTGAGCAAGCGTCGATCTAGTGGGATGGGGTTTGAGGAGGATGT
GATGATGGGCATGGAGGCGAAGGGGGAGGGGGGGGAGGAGGACGAGGAAG
AAGAAGGTGGGATTAAGGCGCGCTTGCGTCAGCCTCGAGGGCAGGGCGAG
GTGGAGGAAGAGGTAAACTTTGTGTGGCACCCCAACACGGTCAAGATTCT
GACCTTCCTCCGCCGGCAGCTCAGGGGGAAGGAGGGGAGGAAGAGGGGAG
TGACGCTGCAAACGTTGGCAGCGGAGGCATCGAGGGCGAACGTGGCCAAG
TTCTTTTGGGAGCTGCTGCAGTTGAAGACGTGGGATTTTGTGCAGTTGGA
GCAGCGAATGGCGTACGGGGATATCATTATCTTGCCGGGGAGGCGGTTTC
GAGAGGCGATTAAGGTGGAGAGGGAGGAGGAGGAGGAGGAGCAGGAGGAG
AGAGGCCCAGAGGAGGAGGAAAGTGTGGCGGCGTAG
back to top
Synonyms
Publications