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Properties
| Property Name | Value |
|---|
| TranscriptId | 599746 |
| Track | FilteredModels2 |
| ProteinId | 599660 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_21 | supercontig | scaffold_21:80689..82337 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7686 ID=mRNA_7686|Name=jgi.p|Nanoce1779_2|599660|organism=Nannochloropsis oceanica|type=mRNA|length=1649bp
AAAAATCCAGCAAATTTTGAGTAGGGGGGAGGAAGACGAGGAAGAAGGGA
GGGAGGGAGGGCACGCGTACCCTCTGGTGGGGGTTGCGAATAGTCTGACG
TTGATGTTGGCAGATATTTTTAAGTTGAGGGATGGGAGATATGTGCATGT
GCAAAACGTGTTCTGGCCTTTGTTTGAAGGGGGGGGATACGGAACGATAG
AGGAGGTGTTCAGTGCGGCCCTTGGGTACCTGGACCGGAGGTGGGTGGAG
ACGGAAGCGGGGATAGAGGGGTTTCCACGGCTGGTGCAGCATGTGAGGAG
GGGGTTGGAGGGAGTTCTAGGGCAGGCTCCAGTGAGCTTACCTCACTTTC
AAGCCATGGCGGAGGAAGCAGGACTGTACATGGAGTGATGGAGAAGGATA
TCAGGGGGGGCCGGAAGGAGGAAGAGAGAAGGGAGCACACCGAGAAGTAT
CGGAAAACAATGTATATGCTGAGATCGTCGAGCAGATAACGACGGGATGT
GTCTCGTCCTTTTTCTGTTCAGGTACTTCATCTTTCGGTTTTTGCCACTG
TATTCCCTTCTCATGGCAACTACCCTCTGAACGAGACTCCGGCAGCTCGT
CTGTGCCTCTGCCTGCACTCCTTCCATCCGTTCCTCCCTCCTCTTCTAGG
CGGTGCCCCAGGACAAGAGCAGCACGTTGGCCCACAAAATAAGAAAGAAT
TTGGTGGTCTCTGTGCTCGTGCTTGTCGTCGTCTTTTTTGCGCCGCCGCT
ACCGCTGCCGCTGCTGCTGCTGATACGTGGTAACGATTGAATTGAACATT
GAACATGACGTGCGCAGGTATGTGTGAATGTATATCCTATCTCTCACTCT
CACAAAATTCCAATCAACAACAAGGATCCAGGAAGGAACCTCCTCTTAAT
CTAGACACTAAATCACTCTTTGTCCCCCAACCGTCGTTTTCGTGTTTGAG
TTTCTCCGTCTCTTTTCTCCTTTCTTTCTCTTTCTGGGCATTATCCCTCT
CCCTCTATTTCTACAAGCTACAATTCCATTCCATCTTCGCAATTCTTCCC
TCTCTAACCCTAACCCTAACCCTAACACTCTCTCCTCTTTCGATGTTTTT
CGTGACATCTGGCAGTGACATAACAATTCTATTTCTACTGCTAAAACTGC
TACCGCCGCTGCTGCTGCAACCAGCTAGTGCAGCCAATACATCACGAAGA
AGCACAAAGAACCAAATTAATGCCGTGGCTTCCTCTTTTCTCTTGCTCTT
ATTTCTATCTCTCCTTCCCCCTCCCTACATGCATTCTCTTATTCCTCCTG
CGCGTCTGTCTACATCACACTAGAACGCGCAAGTTCTGTTTGTTTCCTCC
CTCTCTTCTATCTATATCTATGACATGGATGATATTTGTATACAGGTTTA
TGGAGGGGTGTGTGGGTACACTTGACTGCTTGATTGCATATGCGTTGGAG
AAAGGAGATCTTTTCCTCTCCTTTTGTTGCATGCGCGCACCGGCGACTAT
CTTCCTTTTCCTCCATTTTACAAAGACATGGGAAAAAGGGTGTCTTCCTC
CCGACGGCGGCGCACCTCCTCCTCCTTATCCACCTCCTGCTCCCACCGCA
CCTGCCGCTCTTCTTCCGCCGACTTCCCTTCCTCCTCCTCCTCCTCCTC back to topprotein sequence of jgi.p|Nanoce1779_2|599660 >mRNA_7686-protein ID=mRNA_7686-protein|Name=jgi.p|Nanoce1779_2|599660|organism=Nannochloropsis oceanica|type=polypeptide|length=173bp
MTCAGMCECISYLSLSQNSNQQQGSRKEPPLNLDTKSLFVPQPSFSCLSF
SVSFLLSFSFWALSLSLYFYKLQFHSIFAILPSLTLTLTLTLSPLSMFFV
TSGSDITILFLLLKLLPPLLLQPASAANTSRRSTKNQINAVASSFLLLLF
LSLLPPPYMHSLIPPARLSTSH* back to topmRNA from alignment at scaffold_21:80689..82337- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7686 ID=mRNA_7686|Name=jgi.p|Nanoce1779_2|599660|organism=Nannochloropsis oceanica|type=mRNA|length=1649bp|location=Sequence derived from alignment at scaffold_21:80689..82337- (Nannochloropsis oceanica)
AAAAATCCAGCAAATTTTGAGTAGGGGGGAGGAAGACGAGGAAGAAGGGA
GGGAGGGAGGGCACGCGTACCCTCTGGTGGGGGTTGCGAATAGTCTGACG
TTGATGTTGGCAGATATTTTTAAGTTGAGGGATGGGAGATATGTGCATGT
GCAAAACGTGTTCTGGCCTTTGTTTGAAGGGGGGGGATACGGAACGATAG
AGGAGGTGTTCAGTGCGGCCCTTGGGTACCTGGACCGGAGGTGGGTGGAG
ACGGAAGCGGGGATAGAGGGGTTTCCACGGCTGGTGCAGCATGTGAGGAG
GGGGTTGGAGGGAGTTCTAGGGCAGGCTCCAGTGAGCTTACCTCACTTTC
AAGCCATGGCGGAGGAAGCAGGACTGTACATGGAGTGATGGAGAAGGATA
TCAGGGGGGGCCGGAAGGAGGAAGAGAGAAGGGAGCACACCGAGAAGTAT
CGGAAAACAATGTATATGCTGAGATCGTCGAGCAGATAACGACGGGATGT
GTCTCGTCCTTTTTCTGTTCAGGTACTTCATCTTTCGGTTTTTGCCACTG
TATTCCCTTCTCATGGCAACTACCCTCTGAACGAGACTCCGGCAGCTCGT
CTGTGCCTCTGCCTGCACTCCTTCCATCCGTTCCTCCCTCCTCTTCTAGG
CGGTGCCCCAGGACAAGAGCAGCACGTTGGCCCACAAAATAAGAAAGAAT
TTGGTGGTCTCTGTGCTCGTGCTTGTCGTCGTCTTTTTTGCGCCGCCGCT
ACCGCTGCCGCTGCTGCTGCTGATACGTGGTAACGATTGAATTGAACATT
GAACATGACGTGCGCAGGTATGTGTGAATGTATATCCTATCTCTCACTCT
CACAAAATTCCAATCAACAACAAGGATCCAGGAAGGAACCTCCTCTTAAT
CTAGACACTAAATCACTCTTTGTCCCCCAACCGTCGTTTTCGTGTTTGAG
TTTCTCCGTCTCTTTTCTCCTTTCTTTCTCTTTCTGGGCATTATCCCTCT
CCCTCTATTTCTACAAGCTACAATTCCATTCCATCTTCGCAATTCTTCCC
TCTCTAACCCTAACCCTAACCCTAACACTCTCTCCTCTTTCGATGTTTTT
CGTGACATCTGGCAGTGACATAACAATTCTATTTCTACTGCTAAAACTGC
TACCGCCGCTGCTGCTGCAACCAGCTAGTGCAGCCAATACATCACGAAGA
AGCACAAAGAACCAAATTAATGCCGTGGCTTCCTCTTTTCTCTTGCTCTT
ATTTCTATCTCTCCTTCCCCCTCCCTACATGCATTCTCTTATTCCTCCTG
CGCGTCTGTCTACATCACACTAGAACGCGCAAGTTCTGTTTGTTTCCTCC
CTCTCTTCTATCTATATCTATGACATGGATGATATTTGTATACAGGTTTA
TGGAGGGGTGTGTGGGTACACTTGACTGCTTGATTGCATATGCGTTGGAG
AAAGGAGATCTTTTCCTCTCCTTTTGTTGCATGCGCGCACCGGCGACTAT
CTTCCTTTTCCTCCATTTTACAAAGACATGGGAAAAAGGGTGTCTTCCTC
CCGACGGCGGCGCACCTCCTCCTCCTTATCCACCTCCTGCTCCCACCGCA
CCTGCCGCTCTTCTTCCGCCGACTTCCCTTCCTCCTCCTCCTCCTCCTC back to topCoding sequence (CDS) from alignment at scaffold_21:80689..82337- >mRNA_7686 ID=mRNA_7686|Name=jgi.p|Nanoce1779_2|599660|organism=Nannochloropsis oceanica|type=CDS|length=519bp|location=Sequence derived from alignment at scaffold_21:80689..82337- (Nannochloropsis oceanica)
ATGACGTGCGCAGGTATGTGTGAATGTATATCCTATCTCTCACTCTCACA
AAATTCCAATCAACAACAAGGATCCAGGAAGGAACCTCCTCTTAATCTAG
ACACTAAATCACTCTTTGTCCCCCAACCGTCGTTTTCGTGTTTGAGTTTC
TCCGTCTCTTTTCTCCTTTCTTTCTCTTTCTGGGCATTATCCCTCTCCCT
CTATTTCTACAAGCTACAATTCCATTCCATCTTCGCAATTCTTCCCTCTC
TAACCCTAACCCTAACCCTAACACTCTCTCCTCTTTCGATGTTTTTCGTG
ACATCTGGCAGTGACATAACAATTCTATTTCTACTGCTAAAACTGCTACC
GCCGCTGCTGCTGCAACCAGCTAGTGCAGCCAATACATCACGAAGAAGCA
CAAAGAACCAAATTAATGCCGTGGCTTCCTCTTTTCTCTTGCTCTTATTT
CTATCTCTCCTTCCCCCTCCCTACATGCATTCTCTTATTCCTCCTGCGCG
TCTGTCTACATCACACTAG back to top
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