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Properties
| Property Name | Value |
|---|
| TranscriptId | 599739 |
| Track | FilteredModels2 |
| ProteinId | 599653 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_21 | supercontig | scaffold_21:73329..75258 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7683 ID=mRNA_7683|Name=jgi.p|Nanoce1779_2|599653|organism=Nannochloropsis oceanica|type=mRNA|length=1626bp
ACAGGGTGCTGCAGCCACCAGGCAAACGTCTTATCATCAGCATCAGCACG
CGTCGCCCTCCTACACAGCAAGTCAGCCAACCCCCCAACCATGGCCTCCG
CCAAGTCTAAAGCAGACATCCTCAAGCGGTACCTCTCATCTTCGATGAGC
GAATCTAATGAGGTCATAAAGACAAAGAAGAAACGCAAAAAGAGGCCCGC
AGTCGTAACGGGCGGCATGCACCTGGTGGACCAGGACGAATGGGGCGGGT
TTGGTCGGGGCGGCAGCGATAACGAAGTTGATGACGGCCCCCTGGTCGTA
GACGACAAGGGCGACCAAGTCGCCTCCGTGGAAGCCGCTTCGAAGAAGGC
AGCAGCCGACCCCGCACCGGGAGCAGCAGCCACTAGTGACATTTCCCCTC
CCCGGCGGCGCCCACGGCAGGACAGTTCCAGCCCTGACAATTCTCCTCCC
CGGCGGACACGCCGTCAGAGCCTTTCCCCCTCTCCTCCTCGTGCTGCGCA
TGCCCGCGCCAGTGGGTTCGCTGGTGCTGTCGTTGAGGACGCTTCGCCTC
CCCGGCGTCGCAAGCGCCACGATAGTCCACCTCTTCCTTCTTTTCGTGTT
GCTGTTGATGCTGGTGCTGACGAGGACGCAGCTCCTCCACGTCGACGAAG
ACGACACGATAGCCCTTCCTCCTCTCCTTCTCATTCTACCCTTTCCAAGA
GCCGTAAAGACGAAAAGGAGGAGAAAGATGCCTCCCCACCTCGGCAGCGG
AGGCGACAACGGCATGACAGCCCTACTTCCGCTCGTGATGGTGGGGCTGA
CGGTGGGATGGATGGAGGAAGGGAGACGGTGAAGGGTGATGATGCCTCCT
CGCCCCATCGTCGTCATCATGACAGCCCCCGTCCTCAAAGGAGGAGCAAG
GAGAAGGAGAAGGAAGGGAGGGAAGAGAAGGAAAAGAAGAAGGAGTCGGG
CCTCAAAACCGGGACAGAATTTCGTGTGGAGCTCGAAGCACAGAAGGCGG
CCCAAGCACGAGCATGGGCGGAGGGGGCTAAAGATCAGTCAATGACGGGG
CAGAACGCGGAGACCGTTGTCCGGGATCGTCGCGGGCGGAAGCTGGAGAT
GCTGAGTGAGTTTTTGAACCAAGAGGCCTTCAAGGAGGGGAAGGCTGCCA
AGGAAGCGAAGGAGGAATATGAGTGGGGGAGGGGAAAGGTGCAGAAGGAG
AAGGATGAGGAGCACCGAAAGGAGTTGGAGGACATTAAGAACGCTCCATT
TGCAAGGTACGAGAGCGATCCGACTTTGGAACGGGCCCGTAAAGCGGAGA
TCAGAGCGGATGACCCCATGGCCGCGTATATGATGAAAAAGCTACGGGAG
GCCACGGTGGAGGCAGCGGCGAGAAGCGGCAGGGTGCTCAAGCCTGAATA
TAAGGGGCCGGCACCAAGCACTAATCGTTTTAATATTCGCCCGGGGTACC
GTTGGGATGGAATCGATCGTGGGAATGGCTTTGAAGGGAAGTGGTTCAAG
CGGCAGAGTGAGCTGGTCCACAAGCAGCAGAAGGATCGGGCATGGGGGAT
GTCGGATTTGTAAGATAGCATAGTTCTTAGTCTTTTTTCATGCTACACTC
CTATAAAACTATTGCATGCAACCTGA back to topprotein sequence of jgi.p|Nanoce1779_2|599653 >mRNA_7683-protein ID=mRNA_7683-protein|Name=jgi.p|Nanoce1779_2|599653|organism=Nannochloropsis oceanica|type=polypeptide|length=491bp
MASAKSKADILKRYLSSSMSESNEVIKTKKKRKKRPAVVTGGMHLVDQDE
WGGFGRGGSDNEVDDGPLVVDDKGDQVASVEAASKKAAADPAPGAAATSD
ISPPRRRPRQDSSSPDNSPPRRTRRQSLSPSPPRAAHARASGFAGAVVED
ASPPRRRKRHDSPPLPSFRVAVDAGADEDAAPPRRRRRHDSPSSSPSHST
LSKSRKDEKEEKDASPPRQRRRQRHDSPTSARDGGADGGMDGGRETVKGD
DASSPHRRHHDSPRPQRRSKEKEKEGREEKEKKKESGLKTGTEFRVELEA
QKAAQARAWAEGAKDQSMTGQNAETVVRDRRGRKLEMLSEFLNQEAFKEG
KAAKEAKEEYEWGRGKVQKEKDEEHRKELEDIKNAPFARYESDPTLERAR
KAEIRADDPMAAYMMKKLREATVEAAARSGRVLKPEYKGPAPSTNRFNIR
PGYRWDGIDRGNGFEGKWFKRQSELVHKQQKDRAWGMSDL* back to topmRNA from alignment at scaffold_21:73329..75258- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7683 ID=mRNA_7683|Name=jgi.p|Nanoce1779_2|599653|organism=Nannochloropsis oceanica|type=mRNA|length=1930bp|location=Sequence derived from alignment at scaffold_21:73329..75258- (Nannochloropsis oceanica)
ACAGGGTGCTGCAGCCACCAGGCAAACGTCTTATCATCAGCATCAGCACG
CGTCGCCCTCCTACACAGCAAGTCAGCCAACCCCCCAACCATGGCCTCCG
CCAAGTCTAAAGCAGACATCCTCAAGCGGTACCTCTCATCTTCGATGAGC
GAATCTAATGGTAGGTGAGGCGTGAAGGTTGCAGCAAAGAAATGGAAACT
GCGGCGATTGTGGGGGATGGGAAGTCGACGGCCTGAGGAAAAGGAAAGGA
AGTATGTATTCCCTCCCTACCCGCCCATATACCACATGCATCATATACAC
TACAGAGGTCATAAAGACAAAGAAGAAACGCAAAAAGAGGCCCGCAGTCG
TAACGGGCGGCATGCACCTGGTGGACCAGGACGAATGGGGCGGGTTTGGT
CGGGGCGGCAGCGATAACGAAGGTATGTACTTGTATGCGACGTGACATGA
GTGTAGAGGAGGAACTATCAGCACTGTTATACTCGCTCATAACAATGGGC
AGCAACACGGAGAAGTCCATACCATATTCAAAATGTCGATCGCTCATCCC
TCTTCTCTGTATCCTGCTCCTATCCCCTCAGTTGATGACGGCCCCCTGGT
CGTAGACGACAAGGGCGACCAAGTCGCCTCCGTGGAAGCCGCTTCGAAGA
AGGCAGCAGCCGACCCCGCACCGGGAGCAGCAGCCACTAGTGACATTTCC
CCTCCCCGGCGGCGCCCACGGCAGGACAGTTCCAGCCCTGACAATTCTCC
TCCCCGGCGGACACGCCGTCAGAGCCTTTCCCCCTCTCCTCCTCGTGCTG
CGCATGCCCGCGCCAGTGGGTTCGCTGGTGCTGTCGTTGAGGACGCTTCG
CCTCCCCGGCGTCGCAAGCGCCACGATAGTCCACCTCTTCCTTCTTTTCG
TGTTGCTGTTGATGCTGGTGCTGACGAGGACGCAGCTCCTCCACGTCGAC
GAAGACGACACGATAGCCCTTCCTCCTCTCCTTCTCATTCTACCCTTTCC
AAGAGCCGTAAAGACGAAAAGGAGGAGAAAGATGCCTCCCCACCTCGGCA
GCGGAGGCGACAACGGCATGACAGCCCTACTTCCGCTCGTGATGGTGGGG
CTGACGGTGGGATGGATGGAGGAAGGGAGACGGTGAAGGGTGATGATGCC
TCCTCGCCCCATCGTCGTCATCATGACAGCCCCCGTCCTCAAAGGAGGAG
CAAGGAGAAGGAGAAGGAAGGGAGGGAAGAGAAGGAAAAGAAGAAGGAGT
CGGGCCTCAAAACCGGGACAGAATTTCGTGTGGAGCTCGAAGCACAGAAG
GCGGCCCAAGCACGAGCATGGGCGGAGGGGGCTAAAGATCAGTCAATGAC
GGGGCAGAACGCGGAGACCGTTGTCCGGGATCGTCGCGGGCGGAAGCTGG
AGATGCTGAGTGAGTTTTTGAACCAAGAGGCCTTCAAGGAGGGGAAGGCT
GCCAAGGAAGCGAAGGAGGAATATGAGTGGGGGAGGGGAAAGGTGCAGAA
GGAGAAGGATGAGGAGCACCGAAAGGAGTTGGAGGACATTAAGAACGCTC
CATTTGCAAGGTACGAGAGCGATCCGACTTTGGAACGGGCCCGTAAAGCG
GAGATCAGAGCGGATGACCCCATGGCCGCGTATATGATGAAAAAGCTACG
GGAGGCCACGGTGGAGGCAGCGGCGAGAAGCGGCAGGGTGCTCAAGCCTG
AATATAAGGGGCCGGCACCAAGCACTAATCGTTTTAATATTCGCCCGGGG
TACCGTTGGGATGGAATCGATCGTGGGAATGGCTTTGAAGGGAAGTGGTT
CAAGCGGCAGAGTGAGCTGGTCCACAAGCAGCAGAAGGATCGGGCATGGG
GGATGTCGGATTTGTAAGATAGCATAGTTCTTAGTCTTTTTTCATGCTAC
ACTCCTATAAAACTATTGCATGCAACCTGA back to topCoding sequence (CDS) from alignment at scaffold_21:73329..75258- >mRNA_7683 ID=mRNA_7683|Name=jgi.p|Nanoce1779_2|599653|organism=Nannochloropsis oceanica|type=CDS|length=4419bp|location=Sequence derived from alignment at scaffold_21:73329..75258- (Nannochloropsis oceanica)
TTGATGACGGCCCCCTGGTCGTAGACGACAAGGGCGACCAAGTCGCCTCC
GTGGAAGCCGCTTCGAAGAAGGCAGCAGCCGACCCCGCACCGGGAGCAGC
AGCCACTAGTGACATTTCCCCTCCCCGGCGGCGCCCACGGCAGGACAGTT
CCAGCCCTGACAATTCTCCTCCCCGGCGGACACGCCGTCAGAGCCTTTCC
CCCTCTCCTCCTCGTGCTGCGCATGCCCGCGCCAGTGGGTTCGCTGGTGC
TGTCGTTGAGGACGCTTCGCCTCCCCGGCGTCGCAAGCGCCACGATAGTC
CACCTCTTCCTTCTTTTCGTGTTGCTGTTGATGCTGGTGCTGACGAGGAC
GCAGCTCCTCCACGTCGACGAAGACGACACGATAGCCCTTCCTCCTCTCC
TTCTCATTCTACCCTTTCCAAGAGCCGTAAAGACGAAAAGGAGGAGAAAG
ATGCCTCCCCACCTCGGCAGCGGAGGCGACAACGGCATGACAGCCCTACT
TCCGCTCGTGATGGTGGGGCTGACGGTGGGATGGATGGAGGAAGGGAGAC
GGTGAAGGGTGATGATGCCTCCTCGCCCCATCGTCGTCATCATGACAGCC
CCCGTCCTCAAAGGAGGAGCAAGGAGAAGGAGAAGGAAGGGAGGGAAGAG
AAGGAAAAGAAGAAGGAGTCGGGCCTCAAAACCGGGACAGAATTTCGTGT
GGAGCTCGAAGCACAGAAGGCGGCCCAAGCACGAGCATGGGCGGAGGGGG
CTAAAGATCAGTCAATGACGGGGCAGAACGCGGAGACCGTTGTCCGGGAT
CGTCGCGGGCGGAAGCTGGAGATGCTGAGTGAGTTTTTGAACCAAGAGGC
CTTCAAGGAGGGGAAGGCTGCCAAGGAAGCGAAGGAGGAATATGAGTGGG
GGAGGGGAAAGGTGCAGAAGGAGAAGGATGAGGAGCACCGAAAGGAGTTG
GAGGACATTAAGAACGCTCCATTTGCAAGGTACGAGAGCGATCCGACTTT
GGAACGGGCCCGTAAAGCGGAGATCAGAGCGGATGACCCCATGGCCGCGT
ATATGATGAAAAAGCTACGGGAGGCCACGGTGGAGGCAGCGGCGAGAAGC
GGCAGGGTGCTCAAGCCTGAATATAAGGGGCCGGCACCAAGCACTAATCG
TTTTAATATTCGCCCGGGGTACCGTTGGGATGGAATCGATCGTGGGAATG
GCTTTGAAGGGAAGTGGTTCAAGCGGCAGAGTGAGCTGGTCCACAAGCAG
CAGAAGGATCGGGCATGGGGGATGTCGGATTTGTAAAGGTCATAAAGACA
AAGAAGAAACGCAAAAAGAGGCCCGCAGTCGTAACGGGCGGCATGCACCT
GGTGGACCAGGACGAATGGGGCGGGTTTGGTCGGGGCGGCAGCGATAACG
AAGATGGCCTCCGCCAAGTCTAAAGCAGACATCCTCAAGCGGTACCTCTC
ATCTTCGATGAGCGAATCTAATGTTGATGACGGCCCCCTGGTCGTAGACG
ACAAGGGCGACCAAGTCGCCTCCGTGGAAGCCGCTTCGAAGAAGGCAGCA
GCCGACCCCGCACCGGGAGCAGCAGCCACTAGTGACATTTCCCCTCCCCG
GCGGCGCCCACGGCAGGACAGTTCCAGCCCTGACAATTCTCCTCCCCGGC
GGACACGCCGTCAGAGCCTTTCCCCCTCTCCTCCTCGTGCTGCGCATGCC
CGCGCCAGTGGGTTCGCTGGTGCTGTCGTTGAGGACGCTTCGCCTCCCCG
GCGTCGCAAGCGCCACGATAGTCCACCTCTTCCTTCTTTTCGTGTTGCTG
TTGATGCTGGTGCTGACGAGGACGCAGCTCCTCCACGTCGACGAAGACGA
CACGATAGCCCTTCCTCCTCTCCTTCTCATTCTACCCTTTCCAAGAGCCG
TAAAGACGAAAAGGAGGAGAAAGATGCCTCCCCACCTCGGCAGCGGAGGC
GACAACGGCATGACAGCCCTACTTCCGCTCGTGATGGTGGGGCTGACGGT
GGGATGGATGGAGGAAGGGAGACGGTGAAGGGTGATGATGCCTCCTCGCC
CCATCGTCGTCATCATGACAGCCCCCGTCCTCAAAGGAGGAGCAAGGAGA
AGGAGAAGGAAGGGAGGGAAGAGAAGGAAAAGAAGAAGGAGTCGGGCCTC
AAAACCGGGACAGAATTTCGTGTGGAGCTCGAAGCACAGAAGGCGGCCCA
AGCACGAGCATGGGCGGAGGGGGCTAAAGATCAGTCAATGACGGGGCAGA
ACGCGGAGACCGTTGTCCGGGATCGTCGCGGGCGGAAGCTGGAGATGCTG
AGTGAGTTTTTGAACCAAGAGGCCTTCAAGGAGGGGAAGGCTGCCAAGGA
AGCGAAGGAGGAATATGAGTGGGGGAGGGGAAAGGTGCAGAAGGAGAAGG
ATGAGGAGCACCGAAAGGAGTTGGAGGACATTAAGAACGCTCCATTTGCA
AGGTACGAGAGCGATCCGACTTTGGAACGGGCCCGTAAAGCGGAGATCAG
AGCGGATGACCCCATGGCCGCGTATATGATGAAAAAGCTACGGGAGGCCA
CGGTGGAGGCAGCGGCGAGAAGCGGCAGGGTGCTCAAGCCTGAATATAAG
GGGCCGGCACCAAGCACTAATCGTTTTAATATTCGCCCGGGGTACCGTTG
GGATGGAATCGATCGTGGGAATGGCTTTGAAGGGAAGTGGTTCAAGCGGC
AGAGTGAGCTGGTCCACAAGCAGCAGAAGGATCGGGCATGGGGGATGTCG
GATTTGTAAAGGTCATAAAGACAAAGAAGAAACGCAAAAAGAGGCCCGCA
GTCGTAACGGGCGGCATGCACCTGGTGGACCAGGACGAATGGGGCGGGTT
TGGTCGGGGCGGCAGCGATAACGAAGATGGCCTCCGCCAAGTCTAAAGCA
GACATCCTCAAGCGGTACCTCTCATCTTCGATGAGCGAATCTAATGTTGA
TGACGGCCCCCTGGTCGTAGACGACAAGGGCGACCAAGTCGCCTCCGTGG
AAGCCGCTTCGAAGAAGGCAGCAGCCGACCCCGCACCGGGAGCAGCAGCC
ACTAGTGACATTTCCCCTCCCCGGCGGCGCCCACGGCAGGACAGTTCCAG
CCCTGACAATTCTCCTCCCCGGCGGACACGCCGTCAGAGCCTTTCCCCCT
CTCCTCCTCGTGCTGCGCATGCCCGCGCCAGTGGGTTCGCTGGTGCTGTC
GTTGAGGACGCTTCGCCTCCCCGGCGTCGCAAGCGCCACGATAGTCCACC
TCTTCCTTCTTTTCGTGTTGCTGTTGATGCTGGTGCTGACGAGGACGCAG
CTCCTCCACGTCGACGAAGACGACACGATAGCCCTTCCTCCTCTCCTTCT
CATTCTACCCTTTCCAAGAGCCGTAAAGACGAAAAGGAGGAGAAAGATGC
CTCCCCACCTCGGCAGCGGAGGCGACAACGGCATGACAGCCCTACTTCCG
CTCGTGATGGTGGGGCTGACGGTGGGATGGATGGAGGAAGGGAGACGGTG
AAGGGTGATGATGCCTCCTCGCCCCATCGTCGTCATCATGACAGCCCCCG
TCCTCAAAGGAGGAGCAAGGAGAAGGAGAAGGAAGGGAGGGAAGAGAAGG
AAAAGAAGAAGGAGTCGGGCCTCAAAACCGGGACAGAATTTCGTGTGGAG
CTCGAAGCACAGAAGGCGGCCCAAGCACGAGCATGGGCGGAGGGGGCTAA
AGATCAGTCAATGACGGGGCAGAACGCGGAGACCGTTGTCCGGGATCGTC
GCGGGCGGAAGCTGGAGATGCTGAGTGAGTTTTTGAACCAAGAGGCCTTC
AAGGAGGGGAAGGCTGCCAAGGAAGCGAAGGAGGAATATGAGTGGGGGAG
GGGAAAGGTGCAGAAGGAGAAGGATGAGGAGCACCGAAAGGAGTTGGAGG
ACATTAAGAACGCTCCATTTGCAAGGTACGAGAGCGATCCGACTTTGGAA
CGGGCCCGTAAAGCGGAGATCAGAGCGGATGACCCCATGGCCGCGTATAT
GATGAAAAAGCTACGGGAGGCCACGGTGGAGGCAGCGGCGAGAAGCGGCA
GGGTGCTCAAGCCTGAATATAAGGGGCCGGCACCAAGCACTAATCGTTTT
AATATTCGCCCGGGGTACCGTTGGGATGGAATCGATCGTGGGAATGGCTT
TGAAGGGAAGTGGTTCAAGCGGCAGAGTGAGCTGGTCCACAAGCAGCAGA
AGGATCGGGCATGGGGGATGTCGGATTTGTAAAGGTCATAAAGACAAAGA
AGAAACGCAAAAAGAGGCCCGCAGTCGTAACGGGCGGCATGCACCTGGTG
GACCAGGACGAATGGGGCGGGTTTGGTCGGGGCGGCAGCGATAACGAAGA
TGGCCTCCGCCAAGTCTAAAGCAGACATCCTCAAGCGGTACCTCTCATCT
TCGATGAGCGAATCTAATG back to top
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