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Properties
| Property Name | Value |
|---|
| TranscriptId | 166051 |
| Track | FilteredModels2 |
| ProteinId | 165965 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_21 | supercontig | scaffold_21:70771..72277 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7682 ID=mRNA_7682|Name=jgi.p|Nanoce1779_2|165965|organism=Nannochloropsis oceanica|type=mRNA|length=952bp
CCATAGCATAAGTCAGTGGAAAAAAAACATAGAGAGGACACAGAAGAAAG
TGGAAGGAGTATTTTGCTTGTCCTTCTTTCCAGGATGTGGCACAGAAAAA
GTTGTGTCTAGTATCCTAATTGCATTTTTTCATCACCATCTTGGTAGCAT
GACGGCGTTGCCAGATGGAGTGCCCATGTTGAATGAAGGCATAAGGGGAT
GGGATCTGTTCGAAAATACCGCATACCCGGAGATGAAATAAGTAGAAACA
AAAAGAAAGCAAGACGTGAATGATGACAAAATATTGTGTCGACACAGAGG
AAAGAAAGAGCTATCGATGGTGGTGTCGCTTGAAGGAAGAGAGGGTGTCT
CGTGCGGACACCCCACTGCCAAGCCCCAAAGAGCTCTTTACGTCCCCGAG
GGAACCCCCTCCATCGCAGGCGCGTTCGCCAAAACTCATCACCTATCGAC
CATGCAACCTACCCTCCTCTTCCCACCCGCACCACAGGCCACCCTCGCCA
CTGCATCAAGCTATGGGCGGGACTAGTGCGATCATGAAACGGGACAAGGA
GTGGCAAGAAGTCTTGGGCGCCGTGCACGAGATCTCCAACCTTCTTAACA
CGGGCTTGGACCGACAGACACTCGCCATCCTCGTCAATTTGTGTGAAGCC
GGTGTCAACCCTGAAGCGTTAGCCCTCGTGGTGCAAGAGCTGCGAAAGGA
GGCCGCCAGCAAGCAGCAGCAGCAGCAGCAGCAGCAGCATCAACAGGAGC
AGGCCACTGGCAGGGATCGGTCGACAGATCGTAACTGAACAAATGCAAAT
GGCCAGTGGGAATGACGGTGGTAGGAGTGTGCGTTGATTTTATTGGATGT
GCATGTCTTTTTTTGGTGTATGTATATGCAGGAGAAAATAAAGGGCGTCG
TAAAAGGCAAGGATATGGCTTAATCCTGAAGAAAAAAGAGACTGACAACG
AA back to topprotein sequence of jgi.p|Nanoce1779_2|165965 >mRNA_7682-protein ID=mRNA_7682-protein|Name=jgi.p|Nanoce1779_2|165965|organism=Nannochloropsis oceanica|type=polypeptide|length=173bp
MMTKYCVDTEERKSYRWWCRLKEERVSRADTPLPSPKELFTSPREPPPSQ
ARSPKLITYRPCNLPSSSHPHHRPPSPLHQAMGGTSAIMKRDKEWQEVLG
AVHEISNLLNTGLDRQTLAILVNLCEAGVNPEALALVVQELRKEAASKQQ
QQQQQQHQQEQATGRDRSTDRN* back to topmRNA from alignment at scaffold_21:70771..72277- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7682 ID=mRNA_7682|Name=jgi.p|Nanoce1779_2|165965|organism=Nannochloropsis oceanica|type=mRNA|length=1507bp|location=Sequence derived from alignment at scaffold_21:70771..72277- (Nannochloropsis oceanica)
CCATAGCATAAGTCAGTGGAAAAAAAACATAGAGAGGACACAGAAGAAAG
TGGAAGGAGTATTTTGCTTGTCCTTCTTTCCAGGATGTGGCACAGAAAAA
GTTGTGTCTAGTATCCTAATTGCATTTTTTCATCACCATCTTGGTAGCAT
GACGGCGTTGCCAGATGGAGTGCCCATGTTGAATGAAGGCATAAGGGGAT
GGGATCTGTTCGAAAATACCGCATACCCGGAGATGAAATAAGTAGAAACA
AAAAGAAAGCAAGACGTGAATGATGACAAAATATTGTGTCGACACAGAGG
AAAGAAAGAGCTATCGATGGTGGTGTCGCTTGAAGGAAGAGAGGGTGTCT
CGTGCGGACACCCCACTGCCAAGCCCCAAAGAGCTCTTTACGTCCCCGAG
GGAACCCCCTCCATCGCAGGCGCGTTCGCCAAAACTCATCACCTATCGAC
CATGCAACCTACCCTCCTCTTCCCACCCGCACCACAGGCCACCCTCGCCA
CTGCATCAAGCTATGGGCGGGACTAGTGCGATCATGAAACGGGACAAGGA
GTGGCAAGAAGTCTTGGGCGGTAAGGATGACACAGCCACTCCCTCCCTCC
CCTCCTTTTCCGTGCTTGTCCTCATTGCATGCCCCCCTCGATGCGGGCTG
ATGCGACGTCGCTGTTCCTCGTCCAGGCATGACCATGAATGAGAAGGTGA
TGCTTTCGTTCTCACTCTTCCTCATCCCTCGCCTTTGCCCATACCCTCCC
TCTCCTTCCCTCCCTTCATGTGGCCCTTGTTTTTTGCCTCCGCTTCTCCT
ATCTAAACCCCCCAGCGCTCCTATCCCAATCATCTAGACTGTATTCACTT
TCACTTTTTTTTTTAATTACTGCTTATTTTCATCCTGGCCTCTATCTTCT
TCCCTCCCCTCCCTCCATTTCTTCCCATCACGTTGAAACAGCCGTGCACG
AGATCTCCAACCTTCTTAACACGGGCTTGGACCGACAGACACTCGCCATC
CTCGTCAATTTGTGTGAAGCCGGTGTCAACCCTGAAGCGTTAGCCCTCGG
TACGTGGTGAAGTGCAGTGCAGGGGTTTTCTGAAGTAAATGATGTGTGTA
GGTATGGCAGCATCTTTGACGCGTATTTTCTCCTCGTTCCTACTCCACCA
AGCACTTTTCACGCGAAAATCCCCTGTCCGTAACCATTCACTCACGCGTC
CGCTCTCTATCTCCCATACACGCACACCGTCAGTGGTGCAAGAGCTGCGA
AAGGAGGCCGCCAGCAAGCAGCAGCAGCAGCAGCAGCAGCAGCATCAACA
GGAGCAGGCCACTGGCAGGGATCGGTCGACAGATCGTAACTGAACAAATG
CAAATGGCCAGTGGGAATGACGGTGGTAGGAGTGTGCGTTGATTTTATTG
GATGTGCATGTCTTTTTTTGGTGTATGTATATGCAGGAGAAAATAAAGGG
CGTCGTAAAAGGCAAGGATATGGCTTAATCCTGAAGAAAAAAGAGACTGA
CAACGAA back to topCoding sequence (CDS) from alignment at scaffold_21:70771..72277- >mRNA_7682 ID=mRNA_7682|Name=jgi.p|Nanoce1779_2|165965|organism=Nannochloropsis oceanica|type=CDS|length=1557bp|location=Sequence derived from alignment at scaffold_21:70771..72277- (Nannochloropsis oceanica)
TGGTGCAAGAGCTGCGAAAGGAGGCCGCCAGCAAGCAGCAGCAGCAGCAG
CAGCAGCAGCATCAACAGGAGCAGGCCACTGGCAGGGATCGGTCGACAGA
TCGTAACTGACCGTGCACGAGATCTCCAACCTTCTTAACACGGGCTTGGA
CCGACAGACACTCGCCATCCTCGTCAATTTGTGTGAAGCCGGTGTCAACC
CTGAAGCGTTAGCCCTCGATGATGACAAAATATTGTGTCGACACAGAGGA
AAGAAAGAGCTATCGATGGTGGTGTCGCTTGAAGGAAGAGAGGGTGTCTC
GTGCGGACACCCCACTGCCAAGCCCCAAAGAGCTCTTTACGTCCCCGAGG
GAACCCCCTCCATCGCAGGCGCGTTCGCCAAAACTCATCACCTATCGACC
ATGCAACCTACCCTCCTCTTCCCACCCGCACCACAGGCCACCCTCGCCAC
TGCATCAAGCTATGGGCGGGACTAGTGCGATCATGAAACGGGACAAGGAG
TGGCAAGAAGTCTTGGGCGTGGTGCAAGAGCTGCGAAAGGAGGCCGCCAG
CAAGCAGCAGCAGCAGCAGCAGCAGCAGCATCAACAGGAGCAGGCCACTG
GCAGGGATCGGTCGACAGATCGTAACTGACCGTGCACGAGATCTCCAACC
TTCTTAACACGGGCTTGGACCGACAGACACTCGCCATCCTCGTCAATTTG
TGTGAAGCCGGTGTCAACCCTGAAGCGTTAGCCCTCGATGATGACAAAAT
ATTGTGTCGACACAGAGGAAAGAAAGAGCTATCGATGGTGGTGTCGCTTG
AAGGAAGAGAGGGTGTCTCGTGCGGACACCCCACTGCCAAGCCCCAAAGA
GCTCTTTACGTCCCCGAGGGAACCCCCTCCATCGCAGGCGCGTTCGCCAA
AACTCATCACCTATCGACCATGCAACCTACCCTCCTCTTCCCACCCGCAC
CACAGGCCACCCTCGCCACTGCATCAAGCTATGGGCGGGACTAGTGCGAT
CATGAAACGGGACAAGGAGTGGCAAGAAGTCTTGGGCGTGGTGCAAGAGC
TGCGAAAGGAGGCCGCCAGCAAGCAGCAGCAGCAGCAGCAGCAGCAGCAT
CAACAGGAGCAGGCCACTGGCAGGGATCGGTCGACAGATCGTAACTGACC
GTGCACGAGATCTCCAACCTTCTTAACACGGGCTTGGACCGACAGACACT
CGCCATCCTCGTCAATTTGTGTGAAGCCGGTGTCAACCCTGAAGCGTTAG
CCCTCGATGATGACAAAATATTGTGTCGACACAGAGGAAAGAAAGAGCTA
TCGATGGTGGTGTCGCTTGAAGGAAGAGAGGGTGTCTCGTGCGGACACCC
CACTGCCAAGCCCCAAAGAGCTCTTTACGTCCCCGAGGGAACCCCCTCCA
TCGCAGGCGCGTTCGCCAAAACTCATCACCTATCGACCATGCAACCTACC
CTCCTCTTCCCACCCGCACCACAGGCCACCCTCGCCACTGCATCAAGCTA
TGGGCGGGACTAGTGCGATCATGAAACGGGACAAGGAGTGGCAAGAAGTC
TTGGGCG back to top
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