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Properties
Property Name | Value |
TranscriptId | 673005 |
Track | FilteredModels2 |
ProteinId | 672919 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_21 | supercontig | scaffold_21:39333..43231 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7673 ID=mRNA_7673|Name=jgi.p|Nanoce1779_2|672919|organism=Nannochloropsis oceanica|type=mRNA|length=3611bp CGACCCTCAAGAAAATGCCGGTGCGCAGGATGGTCATCCTGTCACTAGCT TCCTTGTGCCTATGGCGTGGCCTGTCCCCAGCCGCTGCCTTCCTGTCCGC CCGTGTCCCCTCCTCCACCTCCACCGCCGCGGCCGCGCGTCGAGTGCTCC TAATGCCTGGCATCGCCACCACTATCACCACGAATGGCAAGAGCAGGAGC CTCCGCTTGTTTTCCTCCTCGTCATCATCCGAATACTTCGCCGTGATTGA CGAGATGAAAGTGACCGAGCTAAAGGAGCACTTGCGGCGACTCAAGAAGC CCGTGTCGGGCACCAAGGCCTTGCTCCAAGAACGGTTAAAGGAAGCATTG ATTGAGACTCCTGTCCAACTCAGCAGCATTTCGGCTGCCCCTGCTGCTGC CCCTGTTGAAGATGATGAGGAAGAGCAGCTTTTGCCTCCTTCCGGAGGAG AGGAGATGAACGAGGAGGAGGCGGATGGCGGGTACGTACAAGAGCAATCC GCTGCACCTCGTGGTCGTGCTGCGCGCCCGGCGGCTACCCGTGGGTATGG TGATGACGATGAAGCGCAGTATCAACGCGGTGACAACAGCAGGGGGGGCA GTGGCTACAACTATAGGAATGAAGGAAGGGGGGCAGGAGGGCGGTACACA GAGGGAGGGAACACTTGGAGAGCGGATGAGGAGGAGTGGGTCCCGGCGAC TGAGGACGAGGTGGAGCTGGGGCAGGAGATGGAGGCGGAAGTGATGTCGT TTTCTGACCTTGGTATCACCGTTAGGCTTGACGGGAAGTACCGAGGGTTG ATTTATGAGGATGAGCTCGACTACCAGACCCAGAGGAAGGGGTTGAGGGT GGGGGATCGTTGCCCTGTGTATGTGCAGAAGGTGCGGAGGGATGGGAAAG TCGATGCATCCTTTCGTAAATATGGGACTTTCCCGAAGCTTCAAGATGGG AGGCAGGTGGTGCTGGATGCGCTGCTCGCCTCGAGGGACGGGAGTTTGCC GCTAGGCGACAAGAGCAATAGCGAGGAGGTGGTAGCGACGCTGGGTATTT CGAAGAGTCAGTTTAAGGCTGCTGTGGGGATGTTGTACAAGGAAAGGCAA TTGGCGGCACCGGAGGGGTTTCGAATTTCCCTCTTGCCGGAGGGGGAGAG GAGTGAGGAGGTGGGAAGCTTTGGAGGGGAGGAGGGGAGAGAGGAAGTCG TGGAGAGAAACCAGAAGGCTTTTAGCGTGAGGGCAGAGGGAGGGGAGGGA GGCAGGGAGGGGGGATGGGCGGAGGGGGGGGGATGGGATGCGAAGAGGGA GGAGGCAAAGTGGGCGCCGACAAAGGTGTTTATCCGGGGGCTGCCCTTTT CGTTGACGGAGGAGGATGTGGAGAAGATGATGAGTAAGATTGGACCGCTT GTGGGGATTAGGGGCATGATACGGCGGGATGACGGTCGGCCGTCAGGTGT GGCGTGGGTGGAGTACGAGGACGAGGCGGATGCGGTGACTGCGAAAAGTG TGTTTAATGGCAAGACGTTTCGGGGACGGTACTTGGAGGTGTTCAACATG GAGGAGATGAGGAGCGATCAGCATAGGAGAGGTGGGGGAGGAGGAGGAGG AGGATACAATAAAAGGGGCGGTGACGGAGGAGGGGGAGGTTATGAACGAA GAGGGAGGGGTGGGGGCGGCTATGACAGCCGAGGGGGCGGAGGGGGAGGA GGAGATTGGAAGACTGGTGGGGGGCAGCGACGTGACTTTTCCTCGAGCCG TGGAGGAGGAGGAGGAGGAGGAGGGAGGTATGGGGGGGGCCGAGGAGCGG AAGGGGAGGATAGCTGGGGGGAGGTTGGGGGCTGGAGGAATTCGGGGGCT GGAGAGGCTGCGGCGGTTGCAGATGGGGAGGGAGGAGGATATTTCAACCC AAAAAAAGTAGGGGGGTTGAATTTTGATGCGGATTTGGACTTTGGGGATG ATGAGTAGAGAGTGAGAGGGGGGAAGTGTAGTAGAGGGGATGAAGGATAC TTGGAGGGCAGATGAGATTATTAAGTTGGCGAAAGGTTTGACCTACGACA CACGATTAAACTGGCAGGAAAGAGTCAAAACTAACAAAATTGAAAGAAAA AAAGTACGTCCGGCACGTGCAAGAGAGATGAGGTTACGAGTTCTTGGAGT GATGACGAAGGACGGGGAGATACGGAAGCCCCAAAAACTTCCTACATGCG ATGTATATAGATCAATCGTAATCCCTTGCAACTCCACAAAGTGCTGTCAG GATCTGTAAAAACGAGTCCTGCAAGATTTGATCAAGAAATGGGGACATTA ATATGGGTCTCGGGGTGGTACATGGACCCCGCAGGGTTGATCAATTATGC CCTATACCTCCCAGCCTTCTTCAAGCGTAACACACCTGTTCTTTTGTCCA ACCCGCATGCACAAATACCTCGCTTATCCTCCGGGTCCCCCTACACACCC CATATGTAACACAGGCATCTTTTCAAGCTTGTCCTCAAGTCGTCGGTGGT GCTGAATCGTCCAGCCAGGTCGGAAGCCTTCTGTCGCCCCTTCACAAAAC ACGTCCCCCAGCCTACCCCTCCATGGCGCCGCGCTCGACATGTAGCGTCC TCCTGGCCGCCTATTTTATATGCCGTGCAGTCACCCAGGCATTCGTCCAC CTTCCTGCTCCCCCCCCCTTATCTCCTGCCACTGCTGCTGCGGCTGCTGT ACGTAGCCACCACGCCTACCGACACGCGACCATGCGCCTCTTTATGACGG CTGCGGCCAATCACAACAATCCACTAAGTCTCGAGGAGATTTCCCAGAAA ATCAAATTTGAAGTCACAGATTTGGACGCAGGGGCCTATGGGCTGGAGAG CAAGGACGTGGCTTATGCAGTGGAAATTGCCAAGGTCAAAATCCCCCTTC CTGAAGGGACCGGGTTAGGACTGGGCTTGGAAGAACTCAAACGCGGGCGT GACGGACGTGGATGTGTATTGATTTCCGCCATCCAACCGGGGGGGAATGC CGAAAAGGCTGCAGGCGAAGAGCAGAAGATACGTGTGGGGGACATGATTT GTTACCTGGGACGAGAGCCAAACGGGATGGTACGCACAGAGGGGTTGGAT TTTGAGCAGACCATGGAGGCACTACGTACATATATCCAAAGTAACGACGC CACTTCCATCACCCTCGTTCTTAAGAGACTCGTCTTTCGCGAGTCCGTCG ATATCTCGCTGTCTTACACCCCCTCCCCAGAGGAAACAGAGAAATCGGGC ACCGAACCCTGGACGCAATCGCTGTCCATGCTATGTGGCTCACAATTGAG GAAGGAGCTGTTGCGCTCCGGCTTGCCTGTGTATGATAAGAACACGCTCC GGTTCGATCAGCCCTACGTGACGGGGGACTGTGGCGGGGAGGGAATCTGC GGGACGTGTCTCGTGCAGGTGCTAGAAGGAAAGGAGCTGTTGAATGAACC GGATGCGATCGAGGAGATGGTAATTCGGAAGTGGGGGGCGGCGAATTGGA GGTTGTCGTGTCGGGTGGTGGTAGGGGCAACAAATACTCCGGGTACAGTG AGGTTTCGATTGATGCCTCAGGCGCCGTTTATTAGGAAGAGGTGAAGGAG GGGGGGGAAGG back to topprotein sequence of jgi.p|Nanoce1779_2|672919 >mRNA_7673-protein ID=mRNA_7673-protein|Name=jgi.p|Nanoce1779_2|672919|organism=Nannochloropsis oceanica|type=polypeptide|length=648bp MPVRRMVILSLASLCLWRGLSPAAAFLSARVPSSTSTAAAARRVLLMPGI ATTITTNGKSRSLRLFSSSSSSEYFAVIDEMKVTELKEHLRRLKKPVSGT KALLQERLKEALIETPVQLSSISAAPAAAPVEDDEEEQLLPPSGGEEMNE EEADGGYVQEQSAAPRGRAARPAATRGYGDDDEAQYQRGDNSRGGSGYNY RNEGRGAGGRYTEGGNTWRADEEEWVPATEDEVELGQEMEAEVMSFSDLG ITVRLDGKYRGLIYEDELDYQTQRKGLRVGDRCPVYVQKVRRDGKVDASF RKYGTFPKLQDGRQVVLDALLASRDGSLPLGDKSNSEEVVATLGISKSQF KAAVGMLYKERQLAAPEGFRISLLPEGERSEEVGSFGGEEGREEVVERNQ KAFSVRAEGGEGGREGGWAEGGGWDAKREEAKWAPTKVFIRGLPFSLTEE DVEKMMSKIGPLVGIRGMIRRDDGRPSGVAWVEYEDEADAVTAKSVFNGK TFRGRYLEVFNMEEMRSDQHRRGGGGGGGGYNKRGGDGGGGGYERRGRGG GGYDSRGGGGGGGDWKTGGGQRRDFSSSRGGGGGGGGRYGGGRGAEGEDS WGEVGGWRNSGAGEAAAVADGEGGGYFNPKKVGGLNFDADLDFGDDE* back to topmRNA from alignment at scaffold_21:39333..43231- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7673 ID=mRNA_7673|Name=jgi.p|Nanoce1779_2|672919|organism=Nannochloropsis oceanica|type=mRNA|length=3899bp|location=Sequence derived from alignment at scaffold_21:39333..43231- (Nannochloropsis oceanica) CGACCCTCAAGAAAATGCCGGTGCGCAGGATGGTCATCCTGTCACTAGCT
TCCTTGTGCCTATGGCGTGGCCTGTCCCCAGCCGCTGCCTTCCTGTCCGC
CCGTGTCCCCTCCTCCACCTCCACCGCCGCGGCCGCGCGTCGAGTGCTCC
TAATGCCTGGCATCGCCACCACTATCACCACGAATGGCAAGAGCAGGAGC
CTCCGCTTGTTTTCCTCCTCGTCATCATCCGAATACTTCGCCGTGATTGA
CGAGATGAAAGTGACCGAGCTAAAGGAGCACTTGCGGCGACTCAAGAAGC
CCGTGTCGGGCACCAAGGCCTTGCTCCAAGAACGGTTAAAGGAAGCATTG
ATTGAGACTCCTGTCCAACTCAGCAGCATTTCGGCTGCCCCTGCTGCTGC
CCCTGTTGAAGATGATGAGGAAGAGCAGCTTTTGCCTCCTTCCGGAGGAG
AGGAGATGAACGAGGAGGAGGCGGATGGCGGGTACGTACAAGAGCAATCC
GCTGCACCTCGTGGTCGTGCTGCGCGCCCGGCGGCTACCCGTGGGTATGG
TGATGACGATGAAGCGCAGTATCAACGCGGTGACAACAGCAGGGGGGGCA
GTGGCTACAACTATAGGAATGAAGGAAGGGGGGCAGGAGGGCGGTACACA
GAGGGAGGGAACACTTGGAGAGCGGATGAGGAGGAGTGGGTCCCGGCGAC
TGAGGACGAGGTGGAGCTGGGGCAGGAGATGGAGGCGGAAGTGATGTCGT
TTTCTGACCTTGGTATCACCGTTAGGCTTGACGGGAAGTACCGAGGGTTG
ATTTATGAGGATGAGCTCGACTACCAGACCCAGAGGAAGGGGTTGAGGGT
GGGGGATCGTTGCCCTGTGTATGTGCAGAAGGTGCGGAGGGATGGGAAAG
TCGATGCATCCTTTCGTAAATATGGGACTTTCCCGAAGCTTCAAGATGGG
AGGCAGGTGGTGCTGGATGCGCTGCTCGCCTCGAGGGACGGGAGTTTGCC
GCTAGGCGACAAGAGCAATAGCGAGGAGGTGGTAGCGACGCTGGGTATTT
CGAAGAGTCAGTTTAAGGCTGCTGTGGGGATGTTGTACAAGGAAAGGCAA
TTGGCGGCACCGGAGGGGTTTCGAATTTCCCTCTTGCCGGAGGGGGAGAG
GAGTGAGGAGGTGGGAAGCTTTGGAGGGGAGGAGGGGAGAGAGGAAGTCG
TGGAGAGAAACCAGAAGGCTTTTAGCGTGAGGGCAGAGGGAGGGGAGGGA
GGCAGGGAGGGGGGATGGGCGGAGGGGGGGGGATGGGATGCGAAGAGGGA
GGAGGCAAAGTGGGCGCCGACAAAGGTGTTTATCCGGGGGCTGCCCTTTT
CGTTGACGGAGGAGGATGTGGAGAAGATGATGAGTAAGATTGGACCGCTT
GTGGGGATTAGGGGCATGATACGGCGGGATGACGGTCGGCCGTCAGGTGT
GGCGTGGGTGGAGTACGAGGACGAGGCGGATGCGGTGACTGCGAAAAGTG
TGTTTAATGGCAAGACGTTTCGGGGACGGTACTTGGAGGTGTTCAACATG
GAGGAGATGAGGAGCGATCAGCATAGGAGAGGTGGGGGAGGAGGAGGAGG
AGGATACAATAAAAGGGGCGGTGACGGAGGAGGGGGAGGTTATGAACGAA
GAGGGAGGGGTGGGGGCGGCTATGACAGCCGAGGGGGCGGAGGGGGAGGA
GGAGATTGGAAGACTGGTGGGGGGCAGCGACGTGACTTTTCCTCGAGCCG
TGGAGGAGGAGGAGGAGGAGGAGGGAGGTATGGGGGGGGCCGAGGAGCGG
AAGGGGAGGATAGCTGGGGGGAGGTTGGGGGCTGGAGGAATTCGGGGGCT
GGAGAGGCTGCGGCGGTTGCAGATGGGGAGGGAGGAGGATATTTCAACCC
AAAAAAAGTAGGGGGGTTGAATTTTGATGCGGATTTGGACTTTGGGGATG
ATGAGTAGAGAGTGAGAGGGGGGAAGTGTAGTAGAGGGGATGAAGGATAC
TTGGAGGGCAGATGAGATTATTAAGTTGGCGAAAGGTTTGACCTACGACA
CACGATTAAACTGGCAGGAAAGAGTCAAAACTAACAAAATTGAAAGAAAA
AAAGTACGTCCGGCACGTGCAAGAGAGATGAGGTTACGAGTTCTTGGAGT
GATGACGAAGGACGGGGAGATACGGAAGCCCCAAAAACTTCCTACATGCG
ATGTATATAGATCAATCGTAATCCCTTGCAACTCCACAAAGTGCTGTCAG
GATCTGTAAAAACGAGTCCTGCAAGATTTGATCAAGAAATGGGGACATTA
ATATGGGTCTCGGGGTGGTACATGGACCCCGCAGGGTTGATCAATTATGC
CCTATACCTCCCAGCCTTCTTCAAGCGTAACACACCTGTTCTTTTGTCCA
ACCCGCATGCACAAATACCTCGCTTATCCTCCGGGTCCCCCTACACACCC
CATATGTAACACAGGCATCTTTTCAAGCTTGTCCTCAAGTCGTCGGTGGT
GCTGAATCGTCCAGCCAGGTCGGAAGCCTTCTGTCGCCCCTTCACAAAAC
ACGTCCCCCAGCCTACCCCTCCATGGCGCCGCGCTCGACATGTAGCGTCC
TCCTGGCCGCCTATTTTATATGCCGTGCAGTCACCCAGGCATTCGTCCAC
CTTCCTGCTCCCCCCCCCTTATCTCCTGCCACTGCTGCTGCGGCTGCTGT
ACGTAGCCACCACGCCTACCGACACGCGACCATGCGCCTCTTTATGACGG
CTGCGGCCAATCACAACAATCCACTAAGTCTCGAGGAGATTTCCCAGAAA
ATCAAATTTGAAGTCACAGATTTGGACGCAGGGGCCTATGGGCTGGAGAG
CAAGGACGTGGCTTATGCAGGTACGTGTTGGTGTCTATATTTCACTGAGT
GGTGATTGCCTTGAAGTAGGAGTCAATGTAGAAGAGGACTGGGTCTGTGT
ACAGCGTGATCATGTGTACTCCATCAAAGAATTTGTGGCCCAGAAAATAC
CTTTGATTGTGATCCAGATGTTTCTTCTCTTTCGTCGGTGTCTCATCATA
CCATCCCGGCTCATTCACACCTCCTCCTTACCATCTTTTCTCTCTTCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCTCCCCCAA
ATAAATAGTGGAAATTGCCAAGGTCAAAATCCCCCTTCCTGAAGGGACCG
GGTTAGGACTGGGCTTGGAAGAACTCAAACGCGGGCGTGACGGACGTGGA
TGTGTATTGATTTCCGCCATCCAACCGGGGGGGAATGCCGAAAAGGCTGC
AGGCGAAGAGCAGAAGATACGTGTGGGGGACATGATTTGTTACCTGGGAC
GAGAGCCAAACGGGATGGTACGCACAGAGGGGTTGGATTTTGAGCAGACC
ATGGAGGCACTACGTACATATATCCAAAGTAACGACGCCACTTCCATCAC
CCTCGTTCTTAAGAGACTCGTCTTTCGCGAGTCCGTCGATATCTCGCTGT
CTTACACCCCCTCCCCAGAGGAAACAGAGAAATCGGGCACCGAACCCTGG
ACGCAATCGCTGTCCATGCTATGTGGCTCACAATTGAGGAAGGAGCTGTT
GCGCTCCGGCTTGCCTGTGTATGATAAGAACACGCTCCGGTTCGATCAGC
CCTACGTGACGGGGGACTGTGGCGGGGAGGGAATCTGCGGGACGTGTCTC
GTGCAGGTGCTAGAAGGAAAGGAGCTGTTGAATGAACCGGATGCGATCGA
GGAGATGGTAATTCGGAAGTGGGGGGCGGCGAATTGGAGGTTGTCGTGTC
GGGTGGTGGTAGGGGCAACAAATACTCCGGGTACAGTGAGGTTTCGATTG
ATGCCTCAGGCGCCGTTTATTAGGAAGAGGTGAAGGAGGGGGGGGAAGG back to topCoding sequence (CDS) from alignment at scaffold_21:39333..43231- >mRNA_7673 ID=mRNA_7673|Name=jgi.p|Nanoce1779_2|672919|organism=Nannochloropsis oceanica|type=CDS|length=1944bp|location=Sequence derived from alignment at scaffold_21:39333..43231- (Nannochloropsis oceanica) ATGCCGGTGCGCAGGATGGTCATCCTGTCACTAGCTTCCTTGTGCCTATG GCGTGGCCTGTCCCCAGCCGCTGCCTTCCTGTCCGCCCGTGTCCCCTCCT CCACCTCCACCGCCGCGGCCGCGCGTCGAGTGCTCCTAATGCCTGGCATC GCCACCACTATCACCACGAATGGCAAGAGCAGGAGCCTCCGCTTGTTTTC CTCCTCGTCATCATCCGAATACTTCGCCGTGATTGACGAGATGAAAGTGA CCGAGCTAAAGGAGCACTTGCGGCGACTCAAGAAGCCCGTGTCGGGCACC AAGGCCTTGCTCCAAGAACGGTTAAAGGAAGCATTGATTGAGACTCCTGT CCAACTCAGCAGCATTTCGGCTGCCCCTGCTGCTGCCCCTGTTGAAGATG ATGAGGAAGAGCAGCTTTTGCCTCCTTCCGGAGGAGAGGAGATGAACGAG GAGGAGGCGGATGGCGGGTACGTACAAGAGCAATCCGCTGCACCTCGTGG TCGTGCTGCGCGCCCGGCGGCTACCCGTGGGTATGGTGATGACGATGAAG CGCAGTATCAACGCGGTGACAACAGCAGGGGGGGCAGTGGCTACAACTAT AGGAATGAAGGAAGGGGGGCAGGAGGGCGGTACACAGAGGGAGGGAACAC TTGGAGAGCGGATGAGGAGGAGTGGGTCCCGGCGACTGAGGACGAGGTGG AGCTGGGGCAGGAGATGGAGGCGGAAGTGATGTCGTTTTCTGACCTTGGT ATCACCGTTAGGCTTGACGGGAAGTACCGAGGGTTGATTTATGAGGATGA GCTCGACTACCAGACCCAGAGGAAGGGGTTGAGGGTGGGGGATCGTTGCC CTGTGTATGTGCAGAAGGTGCGGAGGGATGGGAAAGTCGATGCATCCTTT CGTAAATATGGGACTTTCCCGAAGCTTCAAGATGGGAGGCAGGTGGTGCT GGATGCGCTGCTCGCCTCGAGGGACGGGAGTTTGCCGCTAGGCGACAAGA GCAATAGCGAGGAGGTGGTAGCGACGCTGGGTATTTCGAAGAGTCAGTTT AAGGCTGCTGTGGGGATGTTGTACAAGGAAAGGCAATTGGCGGCACCGGA GGGGTTTCGAATTTCCCTCTTGCCGGAGGGGGAGAGGAGTGAGGAGGTGG GAAGCTTTGGAGGGGAGGAGGGGAGAGAGGAAGTCGTGGAGAGAAACCAG AAGGCTTTTAGCGTGAGGGCAGAGGGAGGGGAGGGAGGCAGGGAGGGGGG ATGGGCGGAGGGGGGGGGATGGGATGCGAAGAGGGAGGAGGCAAAGTGGG CGCCGACAAAGGTGTTTATCCGGGGGCTGCCCTTTTCGTTGACGGAGGAG GATGTGGAGAAGATGATGAGTAAGATTGGACCGCTTGTGGGGATTAGGGG CATGATACGGCGGGATGACGGTCGGCCGTCAGGTGTGGCGTGGGTGGAGT ACGAGGACGAGGCGGATGCGGTGACTGCGAAAAGTGTGTTTAATGGCAAG ACGTTTCGGGGACGGTACTTGGAGGTGTTCAACATGGAGGAGATGAGGAG CGATCAGCATAGGAGAGGTGGGGGAGGAGGAGGAGGAGGATACAATAAAA GGGGCGGTGACGGAGGAGGGGGAGGTTATGAACGAAGAGGGAGGGGTGGG GGCGGCTATGACAGCCGAGGGGGCGGAGGGGGAGGAGGAGATTGGAAGAC TGGTGGGGGGCAGCGACGTGACTTTTCCTCGAGCCGTGGAGGAGGAGGAG GAGGAGGAGGGAGGTATGGGGGGGGCCGAGGAGCGGAAGGGGAGGATAGC TGGGGGGAGGTTGGGGGCTGGAGGAATTCGGGGGCTGGAGAGGCTGCGGC GGTTGCAGATGGGGAGGGAGGAGGATATTTCAACCCAAAAAAAGTAGGGG GGTTGAATTTTGATGCGGATTTGGACTTTGGGGATGATGAGTAG back to top
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